Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20parvum_20[genbank_20GCA_5F001305435.1_202015-10- 01] 18 sequences; 9,283,240 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq7 100 2e-16 >seq7 Length=866811 Score = 100 bits (110), Expect = 2e-16 Identities = 169/242 (70%), Gaps = 2/242 (1%) Strand=Plus/Minus Query 44097 ATTTTTATTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGA 44156 ||| || || |||||| ||||| ||||||| || | ||| | ||| ||| ||||| | Sbjct 571056 ATTGTTCTTACATTCCGCCTCTAAGTCTCAGGACTAAGTGTAAAGTGGACTCTTTTTGAA 570997 Query 44157 TGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCT 44216 |||||||||| | ||| | | || || | || || || |||||||||||||| | Sbjct 570996 TGTTGTAATCAGAGAGAGTTCTACCATCCTCTAATTGTTTTCCTGCAAAGATCAAACGTT 570937 Query 44217 GCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTG 44275 | ||||| | || | |||||||| || ||||| ||| | || ||| | || || Sbjct 570936 GTTGATCAGGTGGGATTCCTTCCTTATCTTGAATCTT-TGCCTTAACATTCTCAATTGTA 570878 Query 44276 TCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGC 44335 || | | ||| || |||| || || |||||||| || | ||||| || || || ||| Sbjct 570877 TCTGAAGGTTCAACTTCCAAAGTGATAGTCTTTCCTGTCAAAGTCTTAACAAAAATCTGC 570818 Query 44336 AT 44337 || Sbjct 570817 AT 570816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359990321027106