Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20parvum_20[genbank_20GCA_5F001305455.2_202016-05- 09] 18 sequences; 9,104,817 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq11 109 6e-19 >seq11 Length=1218479 Score = 109 bits (120), Expect = 6e-19 Identities = 271/399 (68%), Gaps = 22/399 (6%) Strand=Plus/Plus Query 16674 TTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCT 16733 |||| || || | ||| | |||||||| ||||||||||| || | || || ||| | Sbjct 83000 TTTGATATTCACCAACTCTCTTTTCGAAGAAGTTAGTTTTACCTTGAAGTGAAATAAGGT 83059 Query 16734 CCATGAAATCAAAAGGATTAGTA--GCTGAAAATATTTTAGAGTACCCCAGTTCGGCGAT 16791 |||| ||||||||||||||| | | || | || |||| || || || || | | Sbjct 83060 CCATCCAATCAAAAGGATTAGAAACGTTGTAGAT-TTTTGGAATATCCAAG-GCAAAAAG 83117 Query 16792 TAATCTATCCGCTACAAATTCTATATATTGGCACATTAAT-TCGCAGTTCATTCCTATAA 16850 ||||||||| || |||||||| ||||||||| ||| | | ||| | ||||| || |||| Sbjct 83118 TAATCTATCAGCAACAAATTCAATATATTGGGCCATAAGTCTCG-AATTCATACCAATAA 83176 Query 16851 GACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGC--TCTATAACAACCGCTTCCTTAAT 16908 || || ||||||| || |||| | ||| | || | |||| ||||| | || Sbjct 83177 GATCAACAGGAAGAGAGTC--ACAAAGAAAGTTTCTTTCAACTTCAACAGCTTC--TGAT 83232 Query 16909 AATACTAGCAACTCGTTC-CTCGGA-CGG----TGTATGTTTAAGATGTTTAAACATCAG 16962 | | | | | || | || ||| | | | || |||||| |||| | || | Sbjct 83233 ATGATTTG----TTGTACTCTAGGAGCTGGTAATTTAAATTTAAGGGCTTTATATATTAA 83288 Query 16963 ACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAA 17022 ||| || ||||| ||| | || || || | || |||||||| ||||||||||| | Sbjct 83289 ACAAGCAAAATCAGCATGGAGACCTTCATCACGACTAATAAGTTCATTAGAAAATGTGAG 83348 Query 17023 CCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGC 17061 || ||||| ||| ||||| || | |||||| || || Sbjct 83349 TCCAGGCATAAGTCCACGTTTTTTAAGCCAAAAAATTGC 83387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517545483552240