Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20parvum_20[genbank_20GCA_5F001305455.2_202016-05- 09] 18 sequences; 9,104,817 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq16 86.0 6e-12 >seq16 Length=842072 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 142976 ACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCG 143035 ||||| || | || || |||||||| ||||||||||| | || || || || Sbjct 531224 ACTAAGTGTAAAGTGGACTCTTTTTGAATGTTGTAATCAGAGAGAGTTCTACCATCCTCT 531165 Query 143036 AGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTA 143095 | |||||| || ||| |||||| |||||| ||||| || || || ||||| || || | Sbjct 531164 AATTGTTTTCCTGCAAAGATCAAACGTTGTTGATCAGGTGGGATTCCTTCCTTATCTTGA 531105 Query 143096 ATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTG 143155 || ||| || | | || | || || | ||||| ||||| | ||| | ||||| Sbjct 531104 ATCTTTGCCTTAACATTCTCAATTGTATCTGAAGGTTCAACTTCCAAAGTGATAGTCTTT 531045 Query 143156 CCGGTCAATGTTTTTACGAATATTTGCATA 143185 || ||||| || || || || || |||||| Sbjct 531044 CCTGTCAAAGTCTTAACAAAAATCTGCATA 531015 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 142976 ACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCG 143035 ||||| || | || || |||||||| ||||||||||| | || || || || Sbjct 531680 ACTAAGTGTAAAGTGGACTCTTTTTGAATGTTGTAATCAGAGAGAGTTCTACCATCCTCT 531621 Query 143036 AGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTA 143095 | |||||| || ||| |||||| |||||| ||||| || || || ||||| || || | Sbjct 531620 AATTGTTTTCCTGCAAAGATCAAACGTTGTTGATCAGGTGGGATTCCTTCCTTATCTTGA 531561 Query 143096 ATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTG 143155 || ||| || | | || | || || | || || ||||| | ||| | ||||| Sbjct 531560 ATCTTTGCCTTAACATTCTCAATTGTATCTGAAGGCTCAACTTCCAAAGTGATAGTCTTT 531501 Query 143156 CCGGTCAATGTTTTTACGAATATTTGCATA 143185 || ||||| || || ||||| || |||||| Sbjct 531500 CCTGTCAAAGTCTTAACGAAAATCTGCATA 531471 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507014285921760