Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptosporidium_20parvum_20[genbank_20GCA_5F001305455.2_202016-05-
09] 18 sequences; 9,104,817 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq16 86.0 6e-12
>seq16
Length=842072
Score = 86.0 bits (94), Expect = 6e-12
Identities = 149/214 (70%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 131022 CAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTC 131081
||| ||||| |||| || ||||| ||||||||||||||||| | || | ||
Sbjct 531684 CAGGACTAAGTGTAAAGTGGACTCTTTTTGAATGTTGTAATCAGAGAGAGTTCTACCATC 531625
Query 131082 CTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTC 131141
||||| || || ||||| |||| ||||| || || || || ||||||||||| || ||
Sbjct 531624 CTCTAATTGTTTTCCTGCAAAGATCAAACGTTGTTGATCAGGTGGGATTCCTTCCTTATC 531565
Query 131142 GGTGATTTTCTG-CTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGG 131200
||| | | || ||| | | ||| | ||||| | | ||| | || | || | |
Sbjct 531564 -TTGAATCTTTGCCTTAACATTCTCAATTGTATCTGAAGGCTCAACTTCCAAAGTGATAG 531506
Query 131201 TTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
| || || || | ||| || ||||||||||||||
Sbjct 531505 TCTTTCCTGTCAAAGTCTTAACGAAAATCTGCAT 531472
Score = 84.2 bits (92), Expect = 2e-11
Identities = 146/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 131026 ACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCT 131085
|||||||||| || ||||| |||||||||||||| || | || | ||||||
Sbjct 531452 ACTAAATGTAAAGTAGACTCTTTTTGAATGTTGTAGTCAGAGAGAGTTCTACCATCCTCT 531393
Query 131086 AGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTG 131145
| || || ||||| |||||||||| || || || || |||||||| || || || ||
Sbjct 531392 AATTGTTTTCCTGCAAAGATTAAACGTTGTTGATCAGGTGGGATTCCCTCCTTATC-TTG 531334
Query 131146 ATTTTCTG-CTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTT 131204
| | | || ||| | | ||| | ||||| | | ||| | || | || | || ||
Sbjct 531333 AATCTTTGCCTTAACATTCTCAATTGTATCTGAAGGCTCAACTTCCAAAGTGATAGTCTT 531274
Query 131205 ACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| || | ||| || ||||||||||||||
Sbjct 531273 TCCTGTCAAAGTCTTAACGAAAATCTGCAT 531244
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472012693797120
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |