Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20parvum_20[genbank_20GCA_5F001305455.2_202016-05- 09] 18 sequences; 9,104,817 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq4 416 4e-111 seq1 235 7e-57 seq11 223 4e-53 seq18 165 1e-35 seq13 107 2e-18 seq15 91.5 2e-13 >seq4 Length=207039 Score = 416 bits (460), Expect = 4e-111 Identities = 1103/1667 (66%), Gaps = 36/1667 (2%) Strand=Plus/Minus Query 6503 GTTCCTTTCATTTGATAACAGTAGTTTTCGAGACCATTCTTCGCCTCGACCTTTTTCGCG 6562 |||||| ||| | ||| |||||| || | | ||||| ||||| | ||| | Sbjct 139776 GTTCCT--CATGTTATAGAGGTAGTTCTCCAAAGAGTTCTTAGCCTCAATCTTAAGTCTG 139719 Query 6563 TACTTTTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCT 6622 | || ||||| ||| | || || || || ||||| | ||||| |||||| || || Sbjct 139718 TTCTGCTCATCCTCACCCTTGTATTTCTCAGCATCATTAACCATACGTTCAATATCGTCC 139659 Query 6623 TTCGATAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTA 6682 || |||||||| |||||||| || ||||| || ||||| | ||||| | |||| Sbjct 139658 TTTGATAATCTACCCTTATCGTTAGTAATAGTGATCTTGCTGCTCTTACCAGTACTCTTA 139599 Query 6683 TCTTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGT 6742 || ||||| |||||||| |||||||| ||||||| ||| || | || | ||||||| Sbjct 139598 TCAACAGCAGACACATTCAAGATACCATTAGCATCAATATCAAAGGTGACTTCAATTTGT 139539 Query 6743 GGTGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTA 6802 ||| ||| || ||||| | ||||||||| | || || | || || | | |||| Sbjct 139538 GGTACACCTCTTGGTGCTGGTGGAATACCATCAAGATGGAACTTTCCGAGGAGATGGTTA 139479 Query 6803 TCCGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCT 6862 ||| | | | | | ||||| ||||| |||| || || || || ||||| Sbjct 139478 TCCTTAGTCATGGCTCTCTCACCCTCATAAACTTGGATCAAGACACCACTCTGGTTATCA 139419 Query 6863 TGTGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACC 6922 || | ||||| |||| ||||| | ||| || || ||||| | ||||| | Sbjct 139418 GCATAAGTAGTGAAGACTTGTGTCTTCTTTGCTGGGATAGTTGTATTACGTTCAATAAGC 139359 Query 6923 GGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGT 6982 |||||||| |||||| |||||| | || || || | || | || ||||| | | Sbjct 139358 TTGGTCATAACACCACCAGCAGTTTCTAAACCGAGTGATAATGGAGCAACATCCAATAAT 139299 Query 6983 AACAGGTCTTGAACAG-ATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGC 7041 || || || || || | | | | || |||| ||||||| || ||||| || | || Sbjct 139298 AAGAGATCCTGTACGGCAGAGGATTGCT-CACCATTTAAGATAGCAGCTTGTACAGCAGC 139240 Query 7042 CCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATA 7101 || || || || || || || || || || | ||| | |||||||||||||| | Sbjct 139239 ACCATAAGCAACAGCTTCGTCTGGATTGATTGCTTTGCATGGCTCTTTACCGTTAAAGAA 139180 Query 7102 ATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTC 7161 ||| | || |||| || || || ||||| || ||||| ||||| || | || Sbjct 139179 TTCCTGAATCAAGGCCTGAACCTTTGGAATACGTGTAGAACCACCAACCAATACAACATC 139120 Query 7162 ATTCACTTTCGAT---TTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCAT 7218 || || ||| || || || | || ||| ||| || || || | | Sbjct 139119 ATGTACA---GATCTCTTGTCCATACCAGCATCCTTGAGTACTTTCTCAACTGGAGCTAA 139063 Query 7219 ACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGA---TGT 7275 | | |||||| | || || ||||| || || | || | | |||| || Sbjct 139062 AGTTGCACGGAAGTAATCAGCGCAGAGTTCTTCGAATCTAGCTCTACTGATGGCAACTGA 139003 Query 7276 ATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGA 7335 ||| ||||| || || || | ||||| | ||||| || | ||| | | || || Sbjct 139002 ATA---ATCAATACCTTCATAGAGTGAATCTAACTCAATTGTAGCTTGAGTAGAAGATGA 138946 Query 7336 TAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACC 7395 || |||| |||||| ||||| || |||| | | | | || | | || Sbjct 138945 CAAAGTTCTCTTTGCACGCTCGCATTGAGTTCTGAGTCTTCTTAAAGCTCTAGCATTTGT 138886 Query 7396 GGAAATATCTTT--CT-TATGTTTACGTTTAAACTCTT---CAGAGAAGTGTCGAAGGAG 7449 || | ||| | || ||| || | || || |||| || |||| | | | ||| Sbjct 138885 GGTTAAATCCATACCTCTATTCTTTCTCTTGAAATCTTGTACACAGAATTCT---ACGAG 138829 Query 7450 TCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAA 7509 ||| ||| |||||||||||||||||||| ||||| || ||||| ||||| |||||||| Sbjct 138828 TCTGTTATCAAAATCTTCACCACCCAAGTGAGTATCACCAGCGGTAGCTTTAACTTCAAA 138769 Query 7510 GATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAAT 7569 ||||| ||||||| |||| || || |||||||| ||||||||||| | || || || Sbjct 138768 AATACCATCTTCAATAGTTAATAATGATACATCAAAAGTACCACCACCTAAATCGAAGAT 138709 Query 7570 GAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGT 7629 | ||| || | ||| | | |||||||| ||||| || || ||||| || || || Sbjct 138708 CAATACATTTCTCTCGCCAGTTCCTTTCTTATCAAGACCATAAGCAATAGCAGCTGCAGT 138649 Query 7630 TGGTTCATTAATAATAC-GAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCG 7688 ||| || ||||| || | | ||| |||| |||||||| | | ||||| || || | Sbjct 138648 TGGCTCGTTAATGATTCTCATTACA-TTCAAACCAGCAATTGCACCTGCATCCTTTGTTG 138590 Query 7689 CTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCT 7748 |||| || || || || || || || || || || || || || |||| | | | || Sbjct 138589 CTTGACGCTGTGAGTCATTGAAATAAGCTGGAACAGTAACTACAGCGTTCTTAATTTGGC 138530 Query 7749 TACCGAGATACGATTCCGCGATATCTTTCAT-TTTGGTAAGAACCATCGATGAAATCTCT 7807 ||| | || | ||| | ||| || ||||| ||| |||| |||||| | ||||| ||| Sbjct 138529 GACCCAAGTATGCTTCAGAGATCTCCTTCATCTTTTGTAA-AACCATAGCAGAAATTTCT 138471 Query 7808 TCAGCCGCAAACTGTTTCGTTTCACCGTTAA--AATCAACTTCAATCATGGGTTTATCCG 7865 ||||| || | ||| ||||||| ||| | | || || || || || ||| Sbjct 138470 TCAGCATGGAATTCCTTCTTTTCACC--TAAGTAGTTTACACTGATGATTGGCTTGTCCT 138413 Query 7866 CAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCG 7925 | ||| | || ||| | | ||| | ||||||| ||| || || || Sbjct 138412 TTGGACCTCTAACTACTTTAAATGGCCAGTGAGTCATATCACTTTGTACTGCCTGATCAT 138353 Query 7926 AAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTG 7985 ||||||||| || |||||||| || |||||||||||||| |||| ||||| | || Sbjct 138352 CAAACTTTCTACCAATAAGACGTTTAGCATCAAAAACTGTATTTTCTGGGTTTCTAGCAA 138293 Query 7986 TTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACG 8045 ||||||||| || || || || |||||||| || | |||| ||||| || || || | Sbjct 138292 CTTGGTTCTTTGCTGCATCACCAATAAGACGCTC---AGTTTCTGTAAATGCTACATATG 138236 Query 8046 ATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGA 8105 |||| || || || || ||||| ||||| | || ||| ||||| |||||| ||| | Sbjct 138235 ATGGTGTTGTACGGTTACCTTGATCGTTTGGAACAATATCTACAGTATCGTTTCTCCATA 138176 Query 8106 CGCCGACGCACGAATACGTTGTTCCTAAATCAATACCGATTGCTTGA 8152 | || || || || || || || |||||||||||||| || ||| || Sbjct 138175 CACCAACACATGAGTATGTGGTACCTAAATCAATACCAATAGCTGGA 138129 >seq1 Length=1277761 Score = 235 bits (260), Expect = 7e-57 Identities = 802/1241 (65%), Gaps = 23/1241 (2%) Strand=Plus/Minus Query 6611 TCAATGTCTTCTTTCGATAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTA 6670 || |||||||| | || | ||| ||||||||||| || || |||||||| || |||||| Sbjct 81919 TCTATGTCTTCCTGTGAGAGTCTACCCTTATCATTTGTGATAGTAATCTTCTCAGATTTA 81860 Query 6671 CCCGAGGCCTTATCTTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTT 6730 || | ||||||| | ||||| || | |||||||||| | ||||| || || | Sbjct 81859 CCAGTACCCTTATCCTTTGCACTAACTTGTAAAATACCATCAGTATCAATTTCAAAAGTA 81800 Query 6731 ACATTAATTTGTGGTGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCA 6790 || | |||||| || ||| || || || | ||| || || | | || ||| | ||| Sbjct 81799 ACCTCAATTTGGGGAACACCTCTTGGAGCTGGTGGGATTCCAGAAAGCTCGAATTTTCCA 81740 Query 6791 AGTAAACTGTTATCCGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCA 6850 || | | |||||||| | | | | ||| ||||| ||||| || | || || || Sbjct 81739 AGGAGATTGTTATCCTTAGTCATTGGACGCTCACCCTCATAAACCTGGATAAGTACAGCT 81680 Query 6851 GGTTGATTATCTTGTGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTT 6910 || ||||||||||| || ||| | ||| ||||| | ||||| || ||| Sbjct 81679 GGCTGATTATCTTGGTAAGTACTGAAAACTTGGCTCTTCTTGGTTGGAACAACAGTGTTT 81620 Query 6911 CTCGGAATAACCGGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTC 6970 || ||| | | ||||||| ||||| | ||| || | || | || | ||| || Sbjct 81619 CTACCAATGAGCTTTGTCATAACTCCACCAACAGTCTCAATACCTAAAGTTAAAGGAGTA 81560 Query 6971 ACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCT 7030 || ||||| | ||| | || | | |||||||| | |||||| | ||| Sbjct 81559 ACATCCAATAATAATAAATCACTACCG---------CCTTCACCTGCTAAGATACCAGCT 81509 Query 7031 TGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTA 7090 || || | || || || ||||| || ||||| |||||||| | | || | || || Sbjct 81508 TGTACGGCAGCACCATAAGCGACGGCTTCATCTGGGTTAATTCCTCTGTTTGGCTCCTTT 81449 Query 7091 CCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACC 7150 || | ||| | ||| | || |||||| || ||||| || || || ||||| ||| Sbjct 81448 CCATCAAAGAACTCCTTGATCAAGGCTTGAATCTTAGGGATACGAGTAGAACCACCAACC 81389 Query 7151 AAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTC-TCGAAGTGTTTTTTCGAC 7209 |||||||| |||| |||| || || | ||| | || || || || || || Sbjct 81388 AAAACGATCTCATCTACTTCAGACTTTTTGATTCCAGCATCCTCCAAAACCTTCTTA-AC 81330 Query 7210 AGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAAT 7269 || || ||| || | ||||||||| | || || || || || | ||| | Sbjct 81329 TGGCTCGATAGTCTTTCTGAACAAGTCAGCATTCAACTCATCGAATTTAGCTCTGGTCAA 81270 Query 7270 GGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGT 7329 || | ||||| || | || || ||||| || | | ||||| | Sbjct 81269 GGTTTCGCTCAAATCTACATCCTCCATCAAACCTTCAATCTCGACCTTAACTTGTGGAGC 81210 Query 7330 CGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGAC-GAAGGGCACGCG 7388 ||||| | | || ||||| ||| || | || ||| | | ||||||| | | Sbjct 81209 TGAAGAAAGAGCTCTCTTTGACTTCTCG-ACCTCTCTCCTAAGCTTCTGAAGGGCTCTCT 81151 Query 7389 GGTTACCGGAAATATC-TTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGG 7447 || | | ||| |||| | | ||| || | |||| | | ||||| | Sbjct 81150 TGTCAGACTTTACATCCTTTCCTGTCTTTGACTTGATGATCTTGATA-AAGTGGTCCATA 81092 Query 7448 AGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCA 7507 | |||| ||||||||| ||||| ||||| || ||||| || || || ||| || Sbjct 81091 ACTCTCTGATCGAAATCCTCACCTCCCAAATGGGTATCACCACTTGTAGCAACGACCTCG 81032 Query 7508 AAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAA 7567 || | ||| |||||| | || | ||||||||||| ||||||||||||| || | Sbjct 81031 AAAACACCGTTATCAATGGTCAAGAGAGAAACATCAAAAGTACCACCACCCAAATCGTAT 80972 Query 7568 ATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCC 7627 | | | | || | || | | |||| || | ||| | || || || || || Sbjct 80971 ACTAAAATGCTCTTCTCAGCCT------TCTTGTCCAAACCAAAAGCAATTGCTGCTGCT 80918 Query 7628 GTTGGTTCATTAATAATACGAAG-ACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGT 7686 ||||| |||||||||||||||| ||| |||| || ||||||| | ||||| || || Sbjct 80917 GTTGGCTCATTAATAATACGAATTACA-TTCAAACCGGCAATAGCACCAGCATCCTTGGT 80859 Query 7687 CGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTT 7746 || || || || | ||| |||||||| || ||||| || | || || | | | |||| Sbjct 80858 AGCCTGACGCTGAGCATCATTAAAGTAAGCTGGGACAGTAATAACTGCATGCTTTACTTC 80799 Query 7747 CTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTC 7806 |||||||||||| | || || || || ||||| ||| | ||||| | ||||| ||| Sbjct 80798 CTTACCGAGATAAGCCTCAGCAATTTCCTTCATCTTGACCAAGACCATAGCTGAAACCTC 80739 Query 7807 TTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTT 7847 ||| | || || || ||| | ||||| |||| | ||||| Sbjct 80738 TTCTGGGGCTAATTGCTTCTTCTCACCCTTAACAGAAACTT 80698 >seq11 Length=1218479 Score = 223 bits (246), Expect = 4e-53 Identities = 1153/1822 (63%), Gaps = 43/1822 (2%) Strand=Plus/Minus Query 104368 TAATACATACCCGTTTTTAAACCAGTTTTCCACGCGTACATGTGCATAGACGAAAGTTTT 104427 ||||| || || ||||||| ||| ||||||| | || | |||||||| || | ||| Sbjct 362998 TAATAAATGCCTGTTTTTAGACCTTTTTTCCAACCATAAAAATGCATAGATGATAACTTT 362939 Query 104428 GAAATTGTTGGACTCTCGAC--GAATAAGTTCATACTTTGACTTTGGTCTATATACACAC 104485 | || | | | | || | |||| ||||| | ||| ||| | ||| || Sbjct 362938 GCAAAGTTAGCATTTTCCATATGAAT--GTTCAAAGATTGCGATTGACAAACATATGGAC 362881 Query 104486 CTCTATCCGCCGCCATATCGATGATTGTTTTTTGACTCATTTCCCATACGGTTTTATACA 104545 | ||||| || |||||||| || | ||| ||||| | ||||||||||| || ||||| | Sbjct 362880 CCCTATCTGCAGCCATATCAATTACTGTCTTTTGCTTAATTTCCCATACAGTCTTATAAA 362821 Query 104546 ATTCCTTAAGATCATCGGGTATATCAATAATGTTTTGAACAGACCCATTTGCCTTCACCA 104605 || | ||| || || || || || ||||||| | ||||| || | | Sbjct 362820 GCTCGCGTATATCTTCCGGAATTGTAAGTATATTTTGAATACTGCCATTA---TTTGCAA 362764 Query 104606 TAAGATCTTTCATTT-CCTTCGA--CCAGAGTCCACGTTCTTTCAAATCGTTTACTAAAT 104662 ||| || | | | ||| | ||| | ||| | ||| ||||| |||| |||| Sbjct 362763 TAATATTCTGCTTAAGCCTATCATCCCATAACCCAAGCTCTAGTAAATCATTTAGCAAAT 362704 Query 104663 GTTTGTTTACGACGACAAATTCACCCGCGAGTGTTCGTCTCAAATAGATATTGGTCGTAT 104722 | ||||| || | || ||||| | ||| || | ||| || || | ||| Sbjct 362703 GCGGATTTACTACAAAGAACTCACCAGATAGTACTCTACGATGATAAATGTTCGAGGTAA 362644 Query 104723 ACGGTTCGAAACACTCGTTGTTCCCTAAAATCTGGGATGTGGATGCGGTAGGCATAGGTG 104782 | || || |||| ||| ||||| |||||||| || || |||||||| || ||||| || | Sbjct 362643 ATGGCTCAAAACTCTCATTGTTACCTAAAATTTGCGAAGTGGATGCTGTTGGCATTGGAG 362584 Query 104783 CAAGAAGAAGACTATTCATAGTTCCTTTCTTAACAAG------TTTACGCATGGCATTCC 104836 | | ||| ||| | | || | || || |||| ||| || || Sbjct 362583 ATATTAATAGAGAATTACGAATACCATGTTTGGAAATCCTATCTTTAAGCAA---ATCCC 362527 Query 104837 AATCGTATCGACCACTAAACTTTGG-GT--CTCGATCCCACATATCGAATTGAAGAATAC 104893 |||| | | ||| | | ||| || ||| |||||||||| ||||| | ||||| Sbjct 362526 AATCACAAAGTCCAG---AGTCTGGTGTAACTC---CCCACATATCAAATTGTAAAATAC 362473 Query 104894 CTTTACTAAACGGTGACCCCTTAAACGTTTCATAAGGACCGTACATTTCGGCAAGTTCAC 104953 | ||||| || || || | | ||||| || || ||||| |||| ||||| |||| Sbjct 362472 CCTTACTCGCAGGCGAACCGGAATATGTTTCGTATGGCCCGTATTTTTCTGCAAGCTCAC 362413 Query 104954 ACGACGATTCGAGTGATGCGTGGTAGATAGTTTCGAATATATCAATGTTGAGTTTTCTCG 105013 | | ||||| | ||| | |||||| ||| || || | | || | || | | Sbjct 362412 AGCTAGCGTCGAGAGCTGCATAATAGATAACTTCAAAAATTTGTTTATTTAACTTCTTAG 362353 Query 105014 ATTCTTCTGAACCGAATGTCATTCTTAACATGATAAACACGTCAGCGAGACCCTGAACAC 105073 | | || || || | | ||| | | ||| ||||| ||| ||||| || |||| | Sbjct 362352 CTCCCTCAGACTCGTACGGCATACGAAGCATCATAAAACAGTCTGCGAGCCCTTGAATGC 362293 Query 105074 CAATACCGATGGGTCTGTGACGCATATTTGAACGTTTCCCGTTTTCGGTTGGGTAAAAGT 105133 |||| || | || | || | | ||| || ||| | | || | | ||| | Sbjct 362292 CAATCCCCAATGGACGATGTCTTAAATTCGATTTTTTACACTCTTTGAGAGAATAATATC 362233 Query 105134 TTTTATCAATAACCTTGTTTAAGTTACGTGTAACCATTTTCGTAACACGATGTAACTCTT 105193 ||||| | || || || || | |||| || |||||||| | ||||| | Sbjct 362232 CAACGTCAATCAATTTATTCAAATTCCTCGTAATCACCTTCGTAACTTCTTTTAACTTAT 362173 Query 105194 CATGGTTAAACTCGTTCTTCTCGACATCAACGTATTTTGGTAACGCGATTGATGCGAGAT 105253 || | |||| || || | ||||||| ||||||| | | || || || |||| Sbjct 362172 CAAAATCAAACGTCTTGTTATTTTTATCAACGAATTTTGGAAGGCCAATAGACGCCAGAT 362113 Query 105254 TACATACGGCGGTTTCTTCCTTATCCGTAAACTCCAGAATTTCTGTACACAAATTTGATG 105313 |||| ||||| ||| ||| | || | || | |||||||| || || || || Sbjct 362112 TACAGACGGCAACTTCGTCCGTGCTAGTGTATTCTATGATTTCTGTGCATAAGTTACTTG 362053 Query 105314 ATTTAATCGTACCAACGTGTTTATGGTTCGACTTTTC--ATTACACGCGTCTTTGTAAAG 105371 | ||| || || | | ||| ||||| |||||| ||| || ||||| ||| Sbjct 362052 AAACAATAGTTCCCAAATTTTTCTGGTT--ACTTTTGCTATTTGCAGCATCTTTATAACA 361995 Query 105372 CATATATGGGGTTCCCGTTTCACTTTGGGATTTAATAATTGCTTTCCAAATCTCCGAAGC 105431 ||| |||| || ||||| ||| |||| | | | ||| ||||| | | || Sbjct 361994 AATAAATGGTGTCCCCGTCTCAATTTGAGCCTGTAAGATTAAGAACCAAAGTTTCTGCGC 361935 Query 105432 TGGTACAAC--TTTAGTTGCGATACCTTCAGATTCGTATTTCTCGTAAAGATCTTCAAAC 105489 | | || | ||| || | |||| || || | || || || | | ||| Sbjct 361934 T--TTCATCGTTTTCCTTCCACGGCCTTGTTTCTCATACTCTTCATATAGCTTCTTAAAA 361877 Query 105490 TCTTTACCGTACACGTCT-GAAAGACCCTTTGCCTG-ATCAGGACAAAACAATGACCAAT 105547 || | || | || ||| | || |||| || | ||| || || | | | ||||| Sbjct 361876 TCATCGCCCCAAACATCTTGCAATCCCCT--GCATTCATCTGGGCACATTAGAGTCCAAT 361819 Query 105548 TACCATCGGATTCAACGCGTTTCATGAACAAATCTGGAATCCACATGGCTGAAAAGAGGT 105607 ||| ||||| | || |||||||| ||| |||| ||| | ||| | |||||| | Sbjct 361818 CTTGATCCTTCTCAACTCTTTCCATGAACAGATCAGGAACCCAAAGGGCAGGAAAGAGAT 361759 Query 105608 CTCGACACCTCGCCTCTTCATCACCTTGATTCAAACGAATTTCGAGAAAATCGAGAATAT 105667 | ||||| ||| |||||| | || |||||| | ||||| | ||| || | || || Sbjct 361758 CGCGACATCTCATCTCTTCCTTTCCGTGATTCTTCCTGATTTCAATAAACTCTACAACAT 361699 Query 105668 CGGCGTGCCATGGTTCTAAATAGACTGCAATAGACCCTTTACGACGCCCCGC---TTGAT 105724 | ||||||| || || ||||| | |||||| | |||||||| ||| | ||||| Sbjct 361698 CAACGTGCCACGGCTCCAAATAAATTGCAATGGCACCTTTACGCTTCCCTCCACCTTGAT 361639 Query 105725 TGACATATCTTGCGGTTGAGTTATACACTCGTAACATTGGAATAATACCATCGGATGTTC 105784 | ||| || || || ||||| || || | ||| ||||| | |||| ||| | | Sbjct 361638 CAATATACCTAGCAGTGTCATTATAAACGCGCAGCATCGGAATTAATCCATTAGATCTCC 361579 Query 105785 CATTTGTTCCACGAATATGTGATTTATTTGCACGTACATCGTGAACGTGTAACCCAATAC 105844 |||||||||| ||||||| ||| | || | | | || || | ||||| || Sbjct 361578 CATTTGTTCCTCGAATATATGAACCAGTTCCTCTAATATTACTCACTGCCACCCCAAGAC 361519 Query 105845 CCCCAGCCCACTTACTGATACGCGCACACTCTTTTACTGTATCGTAAATACCGTCGATAC 105904 | || || |||||| || || || | ||| ||| || | ||||||| || Sbjct 361518 CACCCGCAGTCTTACTAATGTTTGCGCATTTAGTTAGTGTGTCAAAGATACCGTTTATTG 361459 Query 105905 TATCTTCCTTATTCGCAATCAGGAAACACGATGACATTTGTGGTCTGGGTGTACCAGCAT 105964 |||||| | || | | ||||| ||||||||||| |||| || || || | || Sbjct 361458 AATCTTCTGGAATCCTGAGTAAAAAACAAGATGACATTTGAGGTCGTGGAGTGCCTGAAT 361399 Query 105965 TGAACAGAGTTGGTGTTGCATGAATGAACAAACCTTTCGATAACGCTTCGTATGTTTCCA 106024 | || || || |||||||||||| | || | || ||||||| || |||||||| | Sbjct 361398 TAAAGAGTGTGGGTGTTGCATGAGTAAAATATTTTTGCGATAACAACTCATATGTTTCAA 361339 Query 106025 GGACGTGATCAATATCGTGTCCATGAATACCAATAGCGACGCGCATATAGAGATATTGGG 106084 | | |||||||| | |||||||||| || ||| ||||| |||| ||| | Sbjct 361338 GTGCAGCTTCAATATCACCACAATGAATACCACAAGAGACCCGCATCAGAAGATGTTGTG 361279 Query 106085 GTGTTTCAATAATTTCACCGTCAATTTTCTGGAGATACCCTTTTTCAAGTGTTTTTAAAC 106144 || |||| | || || ||||||||| | ||||| | |||| || ||||| || Sbjct 361278 GTCTTTCCACAACTTTGTTGTCAATTTTAAGAAGATAGGATCTTTCTAGAGTTTTGAAGG 361219 Query 106145 CAAAATACCCAAACTCAAAATC 106166 ||||||| | | |||||||| Sbjct 361218 CAAAATAATCGTATTCAAAATC 361197 >seq18 Length=417378 Score = 165 bits (182), Expect = 1e-35 Identities = 338/499 (68%), Gaps = 9/499 (2%) Strand=Plus/Minus Query 183161 CCGGTACCAATACCTTCAGTTCCATTTACCAAAACGGTCGGTAATATAGGAACATAATAG 183220 || |||||||| || ||||| ||||||||||||| | || | ||| ||||| ||||| Sbjct 216486 CCTGTACCAATTCCATCAGTACCATTTACCAAAATCATTGGAATTATTGGAACGTAATAT 216427 Query 183221 TCAGGTTCGATTTGTTTACCGTCGTCGTCGAGATAGTTTAATACTGGATCATC----TTT 183276 |||||| ||||||| || || || | | ||| |||||| |||||||| | | Sbjct 216426 AAAGGTTCAATTTGTTGTCCATCATCATATAAATAAGTTAATAAAGGATCATCAGCCTCT 216367 Query 183277 GGGATCAAAAAGTATTCTCGCGTTTTTAGTCAATTTTGTAAATATATACCTGGTTTGACT 183336 |||| ||| ||| || | ||||| | || ||||||||||| | | ||| Sbjct 216366 GGGA---AAATATAT-CTAGTCCATTTAGATAGCTTAGTAAATATATAACGAGCAGCACT 216311 Query 183337 CGCGTCTTTACCACCCATGAGACGTGTACCAAATTGACCACATGGTTCGAGTAAATTAAT 183396 || ||||| ||||| | |||||||||||||||||||||| | || ||| | Sbjct 216310 TGCATCTTTTCCACCTTCTTTTCTACTACCAAATTGACCACATGGTTCTAATAGATTTAG 216251 Query 183397 ATTATTCGACCCCGTAAAATTATGTGCTAATTTTACAATTGTATCTGCCAAAGAGACTTC 183456 |||||| || |||||| || || | || ||||| ||| | ||| || ||| Sbjct 216250 ATTATTACTTCCAACAAAATTTTGAGCCATATTAACAATAGTACTTTGCAATGATGATTC 216191 Query 183457 ACCGTGGTGATACGATGTTTTTTCCGAAACGTATGCGGCTAATTGCGCAACCTTCATTTC 183516 || || ||||| | | | ||| | ||| || | |||||||| ||||| || | ||| Sbjct 216190 TCCATGATGATAAGCACTATGTTCAGCAACATAACCAGCTAATTGTGCAACTTTAAGTTC 216131 Query 183517 AGATGTAAGATTCTTTGTGAAACACGCGTATAACACTTTTCGTTGGGATGGTTTTAAACC 183576 | |||| || ||| | || || | | ||||||| ||| ||||||||||| Sbjct 216130 ATTATTAAGCTTTTTTTTAAATGTTGCAAAAAGTACTTTTCTTTGTCCAGGTTTTAAACC 216071 Query 183577 ATCTGAAACGTGTGCAATCGACCTTTTCAAATCAGCAAGACTGAAATTTACAAGATCTTT 183636 |||| | | | || ||| || || | |||| ||| || |||||| ||||| Sbjct 216070 ATCTAATAAATTTGGAATAGATCTAGTAGTATCATATCTACTAAATAATACAAGTTCTTT 216011 Query 183637 ATGAATAAAATCAGAAATA 183655 ||||||||||||| ||||| Sbjct 216010 ATGAATAAAATCA-AAATA 215993 >seq13 Length=1010751 Score = 107 bits (118), Expect = 2e-18 Identities = 210/303 (69%), Gaps = 13/303 (4%) Strand=Plus/Plus Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748 |||| ||||||| ||| ||||||||||||| ||| || | || | |||||| | ||| Sbjct 773907 GCACCAACATTCATAATTCCATTTGCATCAATATCAAAGGTGACTTCAATTTGAG--GTA 773964 Query 6749 CCCCTC--GGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCG 6806 |||||| ||||| | ||||| ||| | | |||||| ||||| || | ||||| | Sbjct 773965 CCCCTCTGGGTGCTGGAGGAATTCCCATCATTTCAAATTGTCCAAGCAACTTATTATCAG 774024 Query 6807 TCGC--CTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTG 6864 || |||| | ||| |||| | ||||||||| || || |||||| ||| Sbjct 774025 CAGCAAATTCT--CTTTCTCCTTGGAAAACTTTAATTCCAACTTGAGTTTGATTGTCTGC 774082 Query 6865 TGCCGTTGAGAAGA-TTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCG 6923 || || ||||| | || | ||||| |||| || || || |||||||| ||| | Sbjct 774083 AGCAGTGGAGAATACTTGGCTCTTT-TTAGTAGGTATTGTGGTATTTCTGTTAATTAATC 774141 Query 6924 GGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTA 6983 | || | || ||||||| |||||| | || | ||| | ||||| ||||| ||||| Sbjct 774142 GAGTAAAAACTCCACCCAAAGTTTCAATACCTAAAGATAAGGGTGTAACGTC---GAGTA 774198 Query 6984 ACA 6986 ||| Sbjct 774199 ACA 774201 Score = 82.4 bits (90), Expect = 1e-10 Identities = 196/291 (67%), Gaps = 8/291 (3%) Strand=Plus/Plus Query 7493 GTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCA 7552 || ||||| |||||||| | || || ||| | ||| | |||| ||| || ||||| Sbjct 774708 GTTGCTTTAACTTCAAACACTCCGCCAAGAATCTCTAAAATAGAAATATCGAAAGTACCT 774767 Query 7553 CCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTAC 7612 || |||| ||| ||| | || | || | | | ||| | | || || | ||||| Sbjct 774768 CCTCCCAAATCATAAAC---TGCGATTGTTTTGCCATCT--GCTTTT-TCCATTCCGTAT 774821 Query 7613 GCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAG-ACAGTTCAGGCCAGCAATAGT 7671 || | ||| || || ||||| |||||||| || | ||| || || || || |||| Sbjct 774822 GCAAGAGCTGCTGCTGTTGGCTCATTAATGATTCTTGTTACATTTAAG-CCTGCTATAGA 774880 Query 7672 TGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGAC 7731 | ||||| || || ||||| || || ||||| |||||||| || || || || | || Sbjct 774881 GCCAGCATCCTTAGTTGCTTGACGCTGAGAATCATTAAAGTAAGCTGGCACAGTAATAAC 774940 Query 7732 CGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTT 7782 || | | | || |||| ||||| | ||| || | ||||||||||| Sbjct 774941 AGCATGCTTTACACCTCTACCAAGATAAGTTTCGGCAGTTTCTTTCATTTT 774991 >seq15 Length=898173 Score = 91.5 bits (100), Expect = 2e-13 Identities = 168/241 (70%), Gaps = 9/241 (4%) Strand=Plus/Plus Query 11445 TTTCTTACCAATCGCATCAATTTCATCTATAAAGATAATACACG--GTTGATTTTCACGT 11502 |||||| |||| |||||||||||||| ||||| | ||||| | | | ||||| | | Sbjct 745233 TTTCTT-CCAACTGCATCAATTTCATCAATAAAAACAATACTTGGAGATAATTTT--CTT 745289 Query 11503 GCCAATTCAAATATATCACGGACTCTTTTTGCGCCTACGCCTACAAACATTTCAACGAAC 11562 ||| | ||||| || | ||||| |||| || | || ||||| || |||| || Sbjct 745290 GCCTGTGAAAATAATTCTCTTACTCTACTTGCACCCATTCCAACAAAAATCTCAATAAA- 745348 Query 11563 GATGAC--CCCGAACACTGAATAAAAGGAACGGAAGATTCACCCGCTATAGCACGTGCTA 11620 || || || || | || ||| || || || |||||| || | ||| ||| | Sbjct 745349 -ATCACTTCCAGATATATAAAAAAATGGTACATTAGCTTCACCAGCAACAGCTTTTGCCA 745407 Query 11621 AAAGTGTTTTACCTGTACCTGGTTTACCTGTTAATAATGCACCCCTTGGTATTTTAGCAC 11680 | | ||||||||| ||||||||| ||| ||||| ||||| |||||||||| |||| Sbjct 745408 ATAATGTTTTACCGGTACCTGGTGGTCCTACCAATAAAGCACCTTTTGGTATTTTTGCAC 745467 Query 11681 C 11681 | Sbjct 745468 C 745468 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132657095120