Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20parvum_20[genbank_20GCA_5F001305455.2_202016-05- 09] 18 sequences; 9,104,817 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq4 356 2e-92 seq13 269 2e-66 seq1 228 5e-54 seq2 147 1e-29 seq18 141 6e-28 seq16 123 2e-22 seq11 113 3e-19 >seq4 Length=207039 Score = 356 bits (394), Expect = 2e-92 Identities = 670/974 (69%), Gaps = 27/974 (3%) Strand=Plus/Plus Query 475310 GGAACTCATGACGTAACTTTACTATCACTCGAAGATGGTCTTTTCTCTGTAAGAGCAACA 475369 || ||| ||| ||| | ||| || | | ||||||||| |||| || | ||| || Sbjct 138727 GGTACTTTTGATGTATCATTATTAACTATTGAAGATGGTATTTTTGAAGTTAAAGCTACC 138786 Query 475370 GCTGGAGATTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGTATCATGGTGTGTT 475429 ||||| ||| | || | |||||||||||||||||||| ||||| ||| || ||||| Sbjct 138787 GCTGGTGATACTCACTTGGGTGGTGAAGATTTTGATAACAGACTCGTAGAATTCTGTGTA 138846 Query 475430 GAAGATTTCAAGAGGAAAAATAAAGTT---GATCTTTCAACATCTGCTAAAGCATTAAGA 475486 ||||||||||||| || |||| || | ||| | | ||| ||||| ||| |||||| Sbjct 138847 CAAGATTTCAAGAGAAAGAATAGAGGTATGGATTTAACCACAAATGCTAGAGCTTTAAGA 138906 Query 475487 CGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTACT 475546 | || |||||| || || ||||| ||| || || | || ||| |||||||| |||| Sbjct 138907 AGACTCAGAACTCAATGCGAGCGTGCAAAGAGAACTTTGTCATCTTCTACTCAAGCTACA 138966 Query 475547 GTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGGGCTAAA 475606 |||| | ||||| || | |||||| ||||||||| | || | || |||| | Sbjct 138967 ATTGAGTTAGATTCACTCTATGAAGGTATTGATTATTCAGTTGCCATCAGTAGAGCTAGA 139026 Query 475607 TTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTCTC 475666 || ||||| | || ||||| ||| | ||| | | || ||||| |||| ||| Sbjct 139027 TTCGAAGAACTCTGCGCTGATTACTTCCGTGCAACTTTAGCTCCAGTTGAGAAAGTACTC 139086 Query 475667 AGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACA 475726 | ||| || | ||||| | || ||||| |||| | || || ||||| ||| Sbjct 139087 AAGGATGCTGGTATGGACAAGAGATCTGTACATGATGTTGTATTGGTTGGTGGTTCTACA 139146 Query 475727 AGAATTCCAAAAATAAGAGAAATGCTTTCATCATATTTTAATGGTAAAAAGTTAAATG-A 475785 | |||||||| | | || || || ||||| |||||| || | || | Sbjct 139147 CGTATTCCAAAGGTTCAGGCCTTGATTCAGGAATTCTTTAACGGTAAAGAGCCA--TGCA 139204 Query 475786 AAGTG-TAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTAT 475844 ||| | ||||| || ||||||||||| ||||| |||||||| ||||| ||||| ||| Sbjct 139205 AAGCAATCAATCCAGACGAAGCTGTTGCTTATGGTGCTGCTGTACAAGCTGCTATCTTAA 139264 Query 475845 CAGGT---CAATCA---GACG---AGAAACTAAATAATATTGTACTTGTTGACGTAACTC 475895 ||| ||||| | || || | || || ||||| | ||||| ||| Sbjct 139265 ATGGTGAGCAATCCTCTGCCGTACAGGATCTCT-TATTATTGGA--TGTTG------CTC 139315 Query 475896 CACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATA 475955 || | ||| | ||| | ||||| | ||| || ||||||| || |||||||| | |||| Sbjct 139316 CATTATCACTCGGTTTAGAAACTGCTGGTGGTGTTATGACCAAGCTTATTGAACGTAATA 139375 Query 475956 CTCCTATCCCATGCAAAAAAT-CAAAAGTATTTTCCACTTATTCTGATAATCAAACAACT 476014 | |||||||| ||||| || || |||| || | |||||| ||||||| || | | Sbjct 139376 CAACTATCCCA-GCAAAGAAGACACAAGTCTTCACTACTTATGCTGATAACCAGAGTGGT 139434 Query 476015 GTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGA 476074 || |||||| | | ||| ||||| ||| | ||||| ||||| | || ||| Sbjct 139435 GTCTTGATCCAAGTTTATGAGGGTGAGAGAGCCATGACTAAGGATAACCATCTCCTCGGA 139494 Query 476075 ACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACT 476134 | || ||||||| |||||||| || || || ||||| || || ||||||||||| || Sbjct 139495 AAGTTCCATCTTGATGGTATTCCACCAGCACCAAGAGGTGTACCACAAATTGAAGTCACC 139554 Query 476135 TTTGATATTGATGCAAATGGTATTCTTAATGTTACTGCTTGTGATAAATCTAGTAACAAG 476194 |||||||||||||| |||||||| | ||||| ||||| |||||| || | ||| Sbjct 139555 TTTGATATTGATGCTAATGGTATCTTGAATGTGTCTGCTGTTGATAAGAGTACTGGTAAG 139614 Query 476195 AGTAAAAATATAACTATTACAAACAATCGTGGTAGATTTACTGAAGAACAAATTCAACGT 476254 || | || || |||||||| ||| || |||||||| | | || | ||| ||||| Sbjct 139615 AGCAGCAAGATCACTATTACTAACGATAAGGGTAGATTATCAAAGGACGATATTGAACGT 139674 Query 476255 ATGGTTGATGAAGC 476268 |||||| |||| || Sbjct 139675 ATGGTTAATGATGC 139688 Score = 253 bits (280), Expect = 1e-61 Identities = 388/551 (70%), Gaps = 3/551 (1%) Strand=Plus/Plus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388 || ||||||||||||||||| || || ||| ||||| | ||| ||| ||| | || Sbjct 138133 GCTATTGGTATTGATTTAGGTACCACATACTCATGTGTTGGTGTATGGAGAAACGATACT 138192 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 ||||| || || | || || |||||||| | ||||||||||||||||| | ||||| Sbjct 138193 GTAGATATTGTTCCAAACGATCAAGGTAACCGTACAACACCATCATATGTAGCATTTACA 138252 Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAAT 474508 |||||||| | ||||||||| ||||| || || | |||| ||| || || | ||| Sbjct 138253 GAAACTGAGCGTCTTATTGGTGATGCAGCAAAGAACCAAGTTGCTAGAAACCCAGAAAAT 138312 Query 474509 ACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCT 474568 || |||||||||||||| | | |||||| | || ||||||||| | || ||| | Sbjct 138313 ACAGTTTTTGATGCTAAACGTCTTATTGGTAGAAAGTTTGATGATCAGGCAGTACAAAGT 138372 Query 474569 GATATGCGTCATTGGCCTTTTAAGGT-GATAAATGT--TGGTGGTAAACCATATATAGAA 474625 |||||| ||| ||||| ||||| || | || | || | || ||| || Sbjct 138373 GATATGACTCACTGGCCATTTAAAGTAGTTAGAGGTCCAAAGGACAAGCCAATCATCAGT 138432 Query 474626 GCAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTA 474685 | || || |||||||| || |||| | ||| |||||||| | ||||||||| Sbjct 138433 GTAAACTACTTAGGTGAAAAGAAGGAATTCCATGCTGAAGAAATTTCTGCTATGGTTTTA 138492 Query 474686 GCCAAAATGAAACAAACCGCGAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATT 474745 || ||||| | | | | |||| | || | || | | | || ||| || Sbjct 138493 CAAAAGATGAAGGAGATCTCTGAAGCATACTTGGGTCGCCAAATTAAGAACGCTGTAGTT 138552 Query 474746 ACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATT 474805 ||||||||||| ||||| ||||| || || ||||||||||| || ||||| || |||| Sbjct 138553 ACTGTTCCAGCTTATTTCAATGACTCACAGCGTCAAGCAACAAAGGATGCAGGTGCAATT 138612 Query 474806 GCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGT 474865 || ||| | ||||| | | || ||||| || ||||| ||||| || ||||||||||| Sbjct 138613 GCTGGTTTGAATGTAATGAGAATCATTAACGAGCCAACTGCAGCTGCTATTGCTTATGGT 138672 Query 474866 CTTGATAAGAA 474876 ||||||||||| Sbjct 138673 CTTGATAAGAA 138683 >seq13 Length=1010751 Score = 269 bits (298), Expect = 2e-66 Identities = 689/1027 (67%), Gaps = 59/1027 (6%) Strand=Plus/Plus Query 296689 GGAACTGGTTTTGTGCATATTGCTCCTTCACATGGAGAGGATGATTTCAGAGTTTGTTGT 296748 || |||||| |||| ||||| |||||| | ||| || ||||||| ||||||||| Sbjct 868842 GGTACTGGTATTGTACATATGGCTCCTGCTTTTGGTGAAGATGATTATAGAGTTTGTGTA 868901 Query 296749 CTTAATAATATTATTGATTCGAGAAATACGCGAGGCAATTTAATTGATGTA--ATTGATG 296806 |||| |||||||||| ||| | |||||| |||| || ||| Sbjct 868902 AGTAATGGTATTATTGAT------AATCATGGTACAAATTTACC--ATGTCCTATGGATT 868953 Query 296807 ATGATGGTAAATTTACAAATCAAATTCATGATTATTTTGGTATATATTTTAGGGATGCTA 296866 | |||||| |||||| | | || |||||| || |||| |||| ||| || Sbjct 868954 CTAATGGTAGATTTACTGAACCTGTTAATGATTTAAAAGGAATATGGTTTAAAGATTCTG 869013 Query 296867 ATAATCTTATTATTAAAGATTTGAAACATAAAA--AG-TTATTGTTTGATTTTAAACAAT 296923 |||| |||||| |||| || ||| | ||| || ||||| |||| || | | Sbjct 869014 ATAAAATTATTAAACAAGAATTAAAAAAAAAATCCAGATTATTAACTGATAATACA---T 869070 Query 296924 ACAAACATTCTTATCCTTTTTGTTATAGAACAGATACTCCACTTATTTTTAAAATTTGTT 296983 | |||||||||||||| |||| ||| | ||||| || ||| | | | |||| Sbjct 869071 GTATGCATTCTTATCCTTTCTGTTGGAGATCTGATACACCT-TTACAATATAGAGCTGTT 869129 Query 296984 C-TGGTTGGTTTTTAAACGCATCaaatgaaaaattcagagaaaaaatgatgattaataat 297042 | | ||||||| | || | |||| || | ||| ||| | | ||||||||| Sbjct 869130 CCTTCTTGGTTTATTAATGT------TGAATCTTTAAAAGATAAATTATTAATTAATAAT 869183 Query 297043 tctaaaataaattGGATGCCATCAAATAT-TGGTACAAATCAT-TTTGATAATTGGTTAC 297100 |||| |||||||| ||| || ||| | | ||| | ||| |||||||||||| Sbjct 869184 GAAAAAACTAATTGGATTCCA--AATTATGTTAAAGAAAAAAGATTTCATAATTGGTTAC 869241 Query 297101 AATCTTCAGTGGATTGGTGTATTTCAAGAAGTAGATATTGGGGAACACCAATTCCAATTT 297160 || | | ||||||||| || | | | | | |||||||||||| || || || | Sbjct 869242 AAGATGCTAGAGATTGGTGTGTTAGTCGTAATCGTTTTTGGGGAACACCTATACCTATAT 869301 Query 297161 GGAAATCTGATGATGGTGAAGAAATAATTTGTATTGGTTCACTTGAAGAATTAAAAGAAT 297220 || ||| || ||| | | || | ||||||||| |||||||||||||| | Sbjct 869302 GGGTATCAGAAGATTATACAATTATTAAATGTATTGGTAGTATTGAAGAATTAAAATCTT 869361 Query 297221 TTTCAGG-AATT-----GATAAT---ATTAATGATTTACATATTGATAAAATTGATCAAA 297271 | || |||| ||||| ||||||||| ||||| | || |||||| | | Sbjct 869362 TAGCATCCAATTTAAAAGATAAAGAAATTAATGATATACATCGTCATTTTATTGATTATA 869421 Query 297272 TAAAAATTCCTTCTCGTAAAGGAAA-----AGGCATG-TTATCTCGTGTTACCGGTGTTT 297325 | |||||||| || | |||||| | || ||| | || | |||| Sbjct 869422 TTGAAATTCCTGATCCAAGAGGAAATAATTATCCACCATTAAAAAGAATTGAAGAAGTTT 869481 Query 297326 TAGATTGTTGGTTTGAATCAGGTTCTATGCCTTATGGTCAAATTCATTATCCTTTTGAAA 297385 | ||||||||||||||||| |||||||||||||||| ||| ||||||| ||||||| Sbjct 869482 TTGATTGTTGGTTTGAATCTGGTTCTATGCCTTATGCATCCATTAATTATCCATTTGAAA 869541 Query 297386 ATTCCGAAATTTTAGACACTTCACAAGATTATATTGCAGATTTTATAACAGAATCAATTG 297445 || ||| | || | | | | ||| | |||||||||| | ||| | | Sbjct 869542 ATCAAGAATTATTTAATAAT-----ATATT-TCCTGCAGATTTTGTTGGTGAAGGTTTAG 869595 Query 297446 ATCAAACAAGAGGTTGGTTTTATACTTTATTAGTTCTTTCTACAGCTATATTTAACAAAC 297505 ||||||||||||| ||||||||||| ||| | || | || ||||| ||||| | ||| Sbjct 869596 ATCAAACAAGAGGATGGTTTTATACATTAATGGTATTATCAACAGCATTATTTGATCAAC 869655 Query 297506 CAGCATTTAAAAATGTAATTGTTACAGGAATTGTTAACGCAGCTGATGGACAAAAAATGT 297565 |||| ||||||||| | ||||||| || | ||| ||| ||||||| ||||||||| Sbjct 869656 CAGCTTTTAAAAATATTATTGTTAATGGTTTAGTTTTAGCATCTGATGGTAAAAAAATGT 869715 Query 297566 CAAAAAG--TAAAGGTAATTATCCTGATCCA-AATATTTTGATGGATAAATATGGTGCAG 297622 ||||||| |||| ||||||||||||||| | || ||| | ||||||||||||||| Sbjct 869716 CAAAAAGATTAAA--AAATTATCCTGATCCATTAGATATTG-TTAATAAATATGGTGCAG 869772 Query 297623 ATACTTTACGTCTTTATTTATTATCAA--CACCTGTAGTTAAAGCCGAATCAATTAAATT 297680 || ||||| | |||||| | || || |||| || |||| ||| ||| | | | ||| Sbjct 869773 ATTCTTTAAG--ATTATTTTTAATTAATTCACCAGTTGTTAGAGCAGAAACTTTAAGATT 869830 Query 297681 TGATGAA 297687 | | ||| Sbjct 869831 TAAAGAA 869837 Score = 214 bits (236), Expect = 1e-49 Identities = 348/494 (70%), Gaps = 18/494 (4%) Strand=Plus/Plus Query 295795 GATGGACCTCCATTTGCTACAGGA--ACTATGCATTATGGACATATTTTAGTCTCAACTA 295852 |||||||||||||||||||||||| || | |||||||| ||||| | | ||| Sbjct 868011 GATGGACCTCCATTTGCTACAGGATTACCA--CATTATGGTCATATACTTGCAGGTACTG 868068 Query 295853 TTAAAGATACCATGACTAGATATTTAACAATGAATGGTTATCAAGTTAATATGGGAATTG 295912 |||||||| | || |||||| ||| || || ||| | | | | || ||| Sbjct 868069 TTAAAGATGTAGTTACAAGATATGCAACTCAAAAAGGATATTATTGTGAAAGAAGATTTG 868128 Query 295913 GTTGGGATTGCCATGGAGTTCCAATTGAA-ATG---TTGGCTaaaaaaaCTATCGGATAT 295968 | ||||||||||||||| | ||| | ||| ||| ||| | |||| || | || Sbjct 868129 GATGGGATTGCCATGGATTACCAGTAGAACATGAAATTG-----ATAAACAATT--AAAT 868181 Query 295969 ATCACAA--AGA-AAGATTTATTGGAATACGGTATTGATCGTCATAATGATATTTGTCGT 296025 ||||||| ||| ||||| | || | | ||||| ||| | ||||||| ||| | Sbjct 868182 ATCACAAGTAGAGAAGATGTTTTAAATAAAGGTATAGATTTTTATAATGAATCATGTAGA 868241 Query 296026 GATATGGTATTAAAATGTACTGATAAATGGTATTCTGATTTTGAGAGAATTGGAAGATGG 296085 || ||||||| || |||| | ||||| | || | |||| ||| ||||||||| Sbjct 868242 TCAATTGTATTAAGATATACTCAAGAATGGAAATCAACTGTTGAAAGAGTTGGAAGATTA 868301 Query 296086 ATTGATATTAATAATGAATATAAAACAATGGATAAAAATTTTATGGAATCTGTTATTTGG 296145 || ||| || |||||| |||||||| |||||| |||||| ||| || |||| ||| Sbjct 868302 ATCGATTTTGATAATGGTTATAAAACTATGGATTTAAATTTCATGCAAACTGTATGGTGG 868361 Query 296146 TCATTTAAACAACTTTATGAAAAGGAAATGATTTTTGAAGGTTATAAAGTTATGCCTTAT 296205 |||||||||||||| ||| ||| | | ||| | || ||||| ||| ||||| ||| Sbjct 868362 GTATTTAAACAACTTTTTGATAAGAATCTTGTTTATAGAGCTTATAGAGTAATGCCATAT 868421 Query 296206 TCTACTGGTTGCAATACACCATTATCTCATTTTGAGGCAAAACAAAATTATAAAGAGATT 296265 ||||| | || ||||||||||||| ||||||| || |||||||||||| || Sbjct 868422 TCTACAGCATGTGCTACACCATTATCTAATTTTGAATGTAATTTAAATTATAAAGATGTT 868481 Query 296266 ATTGATCCATCTGT 296279 | |||||||||||| Sbjct 868482 AATGATCCATCTGT 868495 Score = 140 bits (154), Expect = 2e-27 Identities = 270/397 (68%), Gaps = 16/397 (4%) Strand=Plus/Minus Query 475790 GTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGT 475849 || || ||||| |||||||||||| ||||||||| | ||||| | | |||| ||| Sbjct 774277 GTTAACCCTGACGAAGCTGTTGCAATGGGAGCTGCTATACAAGCTGGTGTTTTGAAAGGG 774218 Query 475850 CAATCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGT 475909 |||| | || || || | | | ||||| || || | || |||||| Sbjct 774217 ---------GAGA---TCAAGGATCTTTTGTTACTCGACGTTACACCCTTATCTTTAGGT 774170 Query 475910 CTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGC 475969 ||||||| | || || || | ||| | ||| |||||||||| | || || Sbjct 774169 ATTGAAACTTTGGGTGGAGTTTTTACTCGATTAATTAACAGAAATACCACAATACCTACT 774110 Query 475970 AAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATC 476029 ||||| ||||||| |||||| | | || |||||||| || || || | Sbjct 774109 AAAAAGAGCCAAGTATTCTCCACTGCTGCAGACAATCAAACTCAAGTTGGAATTAAAGTT 774050 Query 476030 TTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTT--AATCTTG 476087 || |||| |||||| |||| || |||||||| |||||| ||| ||| || Sbjct 774049 TTCCAAGGAGAAAGAGAATTTGCTGCTGATAATAAGTTGCTTGGACAATTTGAAATGATG 773990 Query 476088 AAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATG 476147 || |||||||| || |||||||| || |||||||||||||| || ||||||||||||| Sbjct 773989 --GGAATTCCTCCAGCACCCAGAGGGGTACCTCAAATTGAAGTCACCTTTGATATTGATG 773932 Query 476148 CAAATGGTATTCTTAATGTTACTGCTTGTGATAAATC 476184 ||||||| ||| | |||||| ||| |||||| || Sbjct 773931 CAAATGGAATTATGAATGTTGGTGCAATTGATAAGTC 773895 Score = 125 bits (138), Expect = 5e-23 Identities = 138/184 (75%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 474681 TTTTAGCCAAAATGAAACAAACCGCGAGCTCATATCTTGGACAAGAAGTAACTGATGCAG 474740 |||| | ||||||||| |||| || | |||||||| || |||| |||| | Sbjct 774999 TTTTGGAAAAAATGAAAGAAACTGCCGAAACTTATCTTGGTAGAGGTGTAAAGCATGCTG 774940 Query 474741 TAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAA 474800 | |||||||| ||||| || |||||||||||||| |||||||||||||| ||||| || Sbjct 774939 TTATTACTGTGCCAGCTTACTTTAATGATTCTCAGCGTCAAGCAACTAAGGATGCTGGCT 774880 Query 474801 GAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTT 474860 || ||||| | ||||| | | || |||||||| ||||||||||| || ||||| | Sbjct 774879 CTATAGCAGGCTTAAATGTAACAAGAATCATTAATGAGCCAACAGCAGCAGCTCTTGCAT 774820 Query 474861 ATGG 474864 | || Sbjct 774819 ACGG 774816 >seq1 Length=1277761 Score = 228 bits (252), Expect = 5e-54 Identities = 397/564 (70%), Gaps = 20/564 (4%) Strand=Plus/Plus Query 474332 ATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTA 474391 |||||||| |||||||| |||||||| ||||| | | | | | ||||||| |||| Sbjct 80406 ATTGGTATCGATTTAGGTACTACTTATTCATGTGTTGGTATCTACAAGAATGGTAGAGTA 80465 Query 474392 GAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAA 474451 || || ||| | ||||| ||||||||| | | |||||||||||||| || || ||||| Sbjct 80466 GAGATTATTCCAAATGAACAAGGTAATCGTATTACACCATCATATGTATCATTCACTGAT 80525 Query 474452 ACTGA-ACATCTTATTGGAGATGCTGCTAAATATCAAGCTGC-ATCTAATCCTGTTAATA 474509 ||| | || | ||||| || | || || |||||||| | ||| ||||| ||| | | Sbjct 80526 GATGAGAGAT-TGATTGGTGAATCAGCCAAGAATCAAGCTACTATC-AATCCAGTTCAGA 80583 Query 474510 CTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTT---GATGATACCACTGTCCAAT 474566 || | || |||| || ||| | ||||||||| ||| |||||| || |||||| Sbjct 80584 CTTTGTTCGATGTAAAGAGACTTATTGGTCGTCGCTTTAAGGATGATTCC---GTCCAAA 80640 Query 474567 CTGATATGCGTCATTGG--CCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGA 474624 |||| | | ||| || | | || | || || | | | || || || ||| | Sbjct 80641 AGGATAAGACT--TTGCTACCATATGAGATTATTAACAAAGATAGCAAGCCTTACATACA 80698 Query 474625 AGCAATACACGCA--GGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTT 474682 || | | | ||||| | || ||||| | || ||| | |||| | ||||| Sbjct 80699 AGT--TTCTGTTAAGGGTGAGAAGAAGCAATTAGCCCCAGAAGAGGTTTCAGCTATGGTC 80756 Query 474683 TTAGCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGT 474741 || | ||| ||||| ||| || ||| | ||||| || | ||||||| ||||||| Sbjct 80757 TTGGTCAAGATGAAGGAAATTGCTGAGG-CTTATCTCGGTAAGGAAGTAAAGCATGCAGT 80815 Query 474742 AATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAG 474801 |||||||| ||||| || ||||||||| |||| ||||| || || || ||||| || Sbjct 80816 TATTACTGTCCCAGCTTACTTTAATGATGCTCAGCGTCAGGCTACCAAGGATGCTGGTGC 80875 Query 474802 AATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTA 474861 ||||| ||| | ||||| | |||||||||||||| ||||||||||| ||| |||||| Sbjct 80876 TATTGCCGGTTTGAATGTAATTCGTATTATTAATGAGCCAACAGCAGCAGCAATTGCTTT 80935 Query 474862 TGGTCTTGATAAGAATTCTGACAA 474885 |||| | || ||||| |||| || Sbjct 80936 TGGTTTGGACAAGAAGGCTGAGAA 80959 Score = 138 bits (152), Expect = 7e-27 Identities = 261/382 (68%), Gaps = 13/382 (3%) Strand=Plus/Plus Query 475793 AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAA 475852 || || |||||||| || || ||||| ||||| || ||||| | ||| ||| ||||| || Sbjct 81471 AACCCAGATGAAGCCGTCGCTTATGGTGCTGCCGTACAAGCTGGTATCTTAGCAGGTGAA 81530 Query 475853 TCAGACG--AGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTC 475910 | || || | | | || ||||| | |||| ||||| | | |||||| Sbjct 81531 ---GGCGGTAGTGATTTATTATTATTGGA--TGTT------ACTCCTTTAACTTTAGGTA 81579 Query 475911 TTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCA 475970 |||| || ||||| || ||||||| || || |||| ||||| ||| | | ||| || Sbjct 81580 TTGAGACTGTTGGTGGAGTTATGACAAAGCTCATTGGTAGAAACACTGTTGTTCCAACCA 81639 Query 475971 AAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCT 476030 | || |||| || ||||| |||||||| || ||||| ||||| | | Sbjct 81640 AGAAGAGCCAAGTTTTCAGTACTTACCAAGATAATCAGCCAGCTGTACTTATCCAGGTTT 81699 Query 476031 TTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAG 476090 ||| ||||| | | | ||||| ||||| || ||||||| || | ||| | Sbjct 81700 ATGAGGGTGAGCGTCCAATGACTAAGGATAACAATCTCCTTGGAAAATTCGAGCTTTCTG 81759 Query 476091 GTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAA 476150 | || || || ||||| ||||| ||||| |||||||| ||||||||||| |||||| | Sbjct 81760 GAATCCCACCAGCTCCAAGAGGTGTTCCCCAAATTGAGGTTACTTTTGAAATTGATACTG 81819 Query 476151 ATGGTATTCTTAATGTTACTGC 476172 |||||||| | | |||| ||| Sbjct 81820 ATGGTATTTTACAAGTTAGTGC 81841 Score = 129 bits (142), Expect = 4e-24 Identities = 254/365 (70%), Gaps = 18/365 (5%) Strand=Plus/Plus Query 269113 CTCGTTAACAATTGTGTCGG-TCCACGCGCTCTAGAGTGAGTTTTATCGCCCACCATTTG 269171 || |||| || ||||| | | ||| | ||||||| ||| |||||||| | ||||| || Sbjct 834502 CTGGTTAGCA-TTGTGACTGCTCCTCTAGCTCTAGCATGAATTTTATCGTCAACCATATG 834560 Query 269172 TTTTAAACGCTGATAATATGTCGGACCAATAAATATTTT-GACATGCATTTTTTCTCCCG 269230 ||||| | |||||| || || || |||||||| ||| | ||| | || | | | ||||| Sbjct 834561 TTTTAGTCTCTGATAGTAAGTTGGCCCAATAAAGATTCTCGAC-TCCAATCTCTTTCCCG 834619 Query 269231 TCATACCATTTGTCATTGTTTCATTTCCCCATGCTTC--ATATCCG----TATG-AAACT 269283 | ||||| |||| ||||||||| || ||| | | ||| |||| |||| Sbjct 834620 TATGGCCATTGTACATTACTTCATTTCC--ATTTTTCTGAAACCCGGAACTATGTAAACG 834677 Query 269284 AGTTCATCATTTATTTTATTAATATCTACACCTGTAAATGGTGTCGCATCACCATATACT 269343 | || || | || | | || | | ||||| || || |||||||| | | | Sbjct 834678 GCTAGAT-ATCTCTTCAACTGTAATTTTC----GTAAAAGGAGTTGCATCACCCTCCAAT 834732 Query 269344 CCTTTAATAGCACATACTTTTCCTAATAGACATTCAATCAATTGTCCAATGGTCATACGT 269403 |||| ||| || || |||| || | ||||||||||| || || ||||| |||||||| Sbjct 834733 CCTTGAATTGCGCACGCTTTGCCAAGCAGACATTCAATTAAATGGCCAATTGTCATACGC 834792 Query 269404 TTTGGCATACAATTAGGATTAATAATAATATCTGGCACAAGTCCAGATTTAGTAAATGGC 269463 || ||| || |||||| |||||||| ||||| | || ||| || ||||||||| Sbjct 834793 GAAGGAATAGCATGAGGATTCATAATAATGTCTGGAATAATCCCATCTTGTGTAAATGGC 834852 Query 269464 ATATC 269468 ||||| Sbjct 834853 ATATC 834857 Score = 122 bits (134), Expect = 6e-22 Identities = 133/177 (75%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 480593 ATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTG 480652 ||| || |||| ||||||||| |||||| | ||||||||||||||| || ||||| || Sbjct 550196 ATTGTAGTCAGATAGAGTTCTACCATCTTCCAATTGCTTTCCAGCAAAGATCAGACGCTG 550255 Query 480653 TTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATC 480712 ||||||||||||||| || ||||| || || |||||| || ||| ||||||||||| Sbjct 550256 TTGATCAGGAGGAATACCCTCCTTATCCTGGATCTTTGCCTTTACATTCTCAATAGTATC 550315 Query 480713 AGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || | ||| | || || || || || || | ||| || || |||||||| Sbjct 550316 GGAAGGTTCAACTTCCAATGTGATGGTCTTTCCTGTTAAAGTTTTGACAAAAATTTG 550372 >seq2 Length=154880 Score = 147 bits (162), Expect = 1e-29 Identities = 132/166 (80%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 817098 TAGATTTTTCATCTCCAAATATTGCAAAGGAAATGCATATTGGACACTTGAGATCTACAA 817157 ||||||| ||||| ||||| ||||| || ||||||||| |||||||||| |||||||||| Sbjct 140552 TAGATTTCTCATCACCAAACATTGCCAAAGAAATGCATGTTGGACACTTAAGATCTACAA 140611 Query 817158 TAATTGGTGAATCTCTTTGTAGAATATATGAATTTTGTGGATGTGAAGTACAAAGAATAA 817217 | |||||||| | |||||||| ||||| || |||| ||||||| |||| | | Sbjct 140612 TTATTGGTGATACAACATGTAGAATTCTTGAATATTTAGGATTTGAAGTATTAAGAGTTA 140671 Query 817218 ATCATATTGGTGATTGGGGAACACAATTTGGTATGTTAATTGCATA 817263 |||| |||| |||||||| || |||||||| ||| | |||| ||| Sbjct 140672 ATCACGTTGGAGATTGGGGTACTCAATTTGGCATGCTTATTGAATA 140717 >seq18 Length=417378 Score = 141 bits (156), Expect = 6e-28 Identities = 338/505 (67%), Gaps = 17/505 (3%) Strand=Plus/Minus Query 355249 CCAGTGCCAATACCTTCTGTTCCATTAACTAAAATCATTGGAATTACAGGTACATAAAAT 355308 || || ||||| || || || ||||| || |||||||||||||||| || || ||| || Sbjct 216486 CCTGTACCAATTCCATCAGTACCATTTACCAAAATCATTGGAATTATTGGAACGTAATAT 216427 Query 355309 ACTGGTTCAATCATTTTATTATCTTCAAATTGAT--GTTGCAATACATCAAAATCATGTT 355366 | |||||||| || ||| ||| || || ||| |||| | | |||| | Sbjct 216426 AAAGGTTCAATTTGTTGTCCATCATCATATAAATAAGTT--AATAAAGGATCATCAGCCT 216369 Query 355367 GTATGAAAATATATTTAGTTAATTGATTGAGTTGTGTGAAGATATATCGTGCA---CTTG 355423 | |||||||||| |||| ||| | || | || || ||||| || ||| |||| Sbjct 216368 CTGGGAAAATATATCTAGTCCATTTAGATAGCTTAGTAAATATATAACGAGCAGCACTTG 216309 Query 355424 CATTATCTTTGCCTCCACTTAATCTTGTACCAAATTGACCATTGGGAAGTAATAAATTTA 355483 ||| |||| || || | ||| |||||||||||||| || ||||| ||||| Sbjct 216308 CAT---CTTTTCCACCTTCTTTTCTACTACCAAATTGACCACATGGTTCTAATAGATTTA 216252 Query 355484 TGTTGTTACTTCCAACATAATTTTGTGCCATTTTTATTATAGTTTCAGTCATTGACTGTT 355543 || |||||||||||| ||||||| ||||| || | ||||| || ||| || Sbjct 216251 GATTATTACTTCCAACAAAATTTTGAGCCATATTAACAATAGTACTTTGCAATGATGATT 216192 Query 355544 CTCCATGATGATATTTAGTTCTTTTCGAAACTGCACCTTGTAATTCAGATACTTTAATTT 355603 ||||||||||||| | | || | ||| ||| ||||| | ||||||| Sbjct 216191 CTCCATGATGATAAGCACTATGTTCAGCAACATAACCAGCTAATTGTGCAACTTTAA--- 216135 Query 355604 CTTCTTTATAAATACCTTCTTCCTCTGAACCATACAATACTTTTCTTTGAGATGGTTTAA 355663 ||| |||| || || || || || | | |||||||||||| ||||| | Sbjct 216134 GTTCATTATTAAGCTTTTTTTTAAATGTTGCAAAAAGTACTTTTCTTTGTCCAGGTTTTA 216075 Query 355664 GACCGTCAGCTATGTTAGGTATTGATCTCATATTATC--ATCGACTGAAAATGAAATAAG 355721 ||| || || || || || ||||| || |||| ||| ||| |||| | | ||| Sbjct 216074 AACCATCTAATAAATTTGGAATAGATCTAGTAGTATCATATCTACT--AAATAATACAAG 216017 Query 355722 TTCGCGATGAATAAAATCATAATAT 355746 ||| ||||||||||||| ||||| Sbjct 216016 TTCTTTATGAATAAAATCAAAATAT 215992 >seq16 Length=842072 Score = 123 bits (136), Expect = 2e-22 Identities = 149/199 (75%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 480572 AAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTT 480631 ||||| ||| | ||| || || ||||||| |||||||| ||| || | ||| || Sbjct 531670 AAGTGGACTCTTTTTG--AATGTTGTAATCAGAGAGAGTTCTACCATCCTCTAATTGTTT 531613 Query 480632 TCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTG 480691 ||| ||||| || | ||||||||||||||| || ||||||||||| |||||||||||| Sbjct 531612 TCCTGCAAAGATCAAACGTTGTTGATCAGGTGGGATTCCTTCCTTATCTTGAATCTTTGC 531553 Query 480692 TTTGACAGCTTCAATAGTATCAGTGTG-TGAAGTTTCAAGGGTAATAGTTTTACCGGTGA 480750 || ||| ||||| ||||| | | | || || ||| | | ||||| || || || | Sbjct 531552 CTTAACATTCTCAATTGTATCTGAAGGCTCAACTTCCAAAG-TGATAGTCTTTCCTGTCA 531494 Query 480751 GAGTCTTAACGAAAATTTG 480769 ||||||||||||||| || Sbjct 531493 AAGTCTTAACGAAAATCTG 531475 Score = 120 bits (132), Expect = 2e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 480572 AAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTT 480631 ||||| ||| | ||| || || ||||||| |||||||| ||| || | ||| || Sbjct 531214 AAGTGGACTCTTTTTG--AATGTTGTAATCAGAGAGAGTTCTACCATCCTCTAATTGTTT 531157 Query 480632 TCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTG 480691 ||| ||||| || | ||||||||||||||| || ||||||||||| |||||||||||| Sbjct 531156 TCCTGCAAAGATCAAACGTTGTTGATCAGGTGGGATTCCTTCCTTATCTTGAATCTTTGC 531097 Query 480692 TTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAG 480751 || ||| ||||| ||||| | || | ||| | || ||||| || || || | Sbjct 531096 CTTAACATTCTCAATTGTATCTGAAGGTTCAACTTCCAAAGTGATAGTCTTTCCTGTCAA 531037 Query 480752 AGTCTTAACGAAAATTTG 480769 ||||||||| ||||| || Sbjct 531036 AGTCTTAACAAAAATCTG 531019 Score = 114 bits (126), Expect = 8e-20 Identities = 133/177 (75%), Gaps = 2/177 (1%) Strand=Plus/Minus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 || || |||| |||||||| ||| || | ||| ||||| ||||| || | ||||||| Sbjct 531422 TTGTAGTCAGAGAGAGTTCTACCATCCTCTAATTGTTTTCCTGCAAAGATTAAACGTTGT 531363 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 |||||||| || ||||| ||||| |||||||||||| || ||| ||||| ||||| Sbjct 531362 TGATCAGGTGGGATTCCCTCCTTATCTTGAATCTTTGCCTTAACATTCTCAATTGTATCT 531303 Query 480714 GTGTG-TGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | | | || || ||| | | ||||| || || || | ||||||||||||||| || Sbjct 531302 GAAGGCTCAACTTCCAAAG-TGATAGTCTTTCCTGTCAAAGTCTTAACGAAAATCTG 531247 >seq11 Length=1218479 Score = 113 bits (124), Expect = 3e-19 Identities = 247/367 (67%), Gaps = 16/367 (4%) Strand=Plus/Minus Query 894979 AATaaaaaaaTGGATTCTGATCTTGATAAAATAAAAGATGTAGGTTTATATTTCATTGAA 895038 ||||| || |||| | ||||||||| ||||| || ||| ||| ||||||| || | Sbjct 599425 AATAATAAGATGGGTGGTGATCTTGAAAAAATTAAGATTGTTGGTGAATATTTCGTTCAC 599366 Query 895039 GTTTTTAAAGCATGTGGTATTAATATGTCTGAAACAAAGTTTATTTGGTCAAGTGATTTA 895098 | | || || || || ||||| | | || ||| ||||| || |||||| Sbjct 599365 ATATGGAAGGCTGCAGGAATGGATATGACAAATGTAAGATTTGTTTGGGCATCTGATTTT 599306 Query 895099 TTTAATA---AAAATCCTGAAAAATATTTTACAAGATTGTTAGATATTTCCGAAGAAACC 895155 ||||| || || || | | |||| |||| | || |||||||| ||||| Sbjct 599305 ATTAATGGGGAAGATTCTAATGAGTATTGGTTAAGAGTTTTTGATATTTCT--AGAAAGT 599248 Query 895156 TC--TCTTTCCAGGAGTAAAAGATGTTGTCAAATTATGGGTCGAAAAGACGGAGATGAAT 895213 | | || | || | |||||||||||| ||||||||||| || |||| |||||| Sbjct 599247 TTAATATTACTAGAATTAAAAGATGTTGCCAAATTATGGGAAGACAAGAAAATGATGAAC 599188 Query 895214 TATCTGTTTCTCAAATTATTTATCCTTGCATGCAAGTTGCAGATATTTTTGAACTCGAAC 895273 | | | || | | ||||||| ||||||||| ||| ||||| || ||||| Sbjct 599187 AACCGTGTGCTTCAGTATTTTATCCATGCATGCAATGTGCTGATATATTCCAACTC---- 599132 Query 895274 CTGAAGGAATAGATATTTGTCAATTAGGTGTTGATCAACGTAAAGTTAATATGCTCGCTC 895333 |||| ||||||||| || |||||| | |||||| | |||||||| ||||| ||| Sbjct 599131 ---AAGG--CAGATATTTGCCAGTTAGGTATGGATCAAAGAAAAGTTAACATGCTTGCTA 599077 Query 895334 TCGAATA 895340 ||||| Sbjct 599076 GAGAATA 599070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268178427892664