Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20parvum_20[genbank_20GCA_5F001305455.2_202016-05- 09] 18 sequences; 9,104,817 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq4 605 4e-168 seq1 408 6e-109 seq16 170 3e-37 seq11 111 2e-19 seq13 102 1e-16 >seq4 Length=207039 Score = 605 bits (670), Expect = 4e-168 Identities = 1114/1607 (69%), Gaps = 47/1607 (3%) Strand=Plus/Plus Query 195295 TCAAGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGA 195354 || |||||||||||| |||||||| || || ||||||||||||||||||||| ||| || Sbjct 138129 TCCAGCTATTGGTATTGATTTAGGTACCACATACTCATGTGTTGGTGTATGGAGAAACGA 138188 Query 195355 TCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTT 195414 | |||||| ||| | || || || ||||| ||||||||||| ||||| || || || || Sbjct 138189 TACTGTAGATATTGTTCCAAACGATCAAGGTAACCGTACAACACCATCATATGTAGCATT 138248 Query 195415 TACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTAT 195474 |||||| | ||| ||||| |||| ||||| ||||| || || |||| ||||| Sbjct 138249 TACAGAAACTGAGCGTCTTATTGGTGATGCAGCAAAGAACCAAGTTGCTAGAAACCCAGA 138308 Query 195475 CAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCA 195534 ||||| || ||||| || || |||||||||||| | |||||| ||| || ||| || Sbjct 138309 AAATACAGTTTTTGATGCTAAACGTCTTATTGGTAGAAAGTTTGATGATCAGGCAGTACA 138368 Query 195535 AGACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGAT 195594 | ||||| | ||||| | | | |||| ||| ||| || ||||| || || Sbjct 138369 AAGTGATATGACTCACTGGCCATTTAAAGTAGTTAGAGGTCCAAAGGACAAGCCAATCAT 138428 Query 195595 TAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGT 195654 | ||| | | ||||| ||||| |||| | | ||||||||||| ||||||| Sbjct 138429 CAGTGTAAACTACTTAGGTGAAAAGAAGGAATTCCATGCTGAAGAAATTTCTGCTATGGT 138488 Query 195655 GTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGT---AAAACTGTGAAAGATGC 195711 || ||||||||||||| | ||| | | | ||||| ||| | ||| | || Sbjct 138489 TTTACAAAAGATGAAGGAGATCTCTGAAGCATACTTGGGTCGCCAAATTAAGAACGCTGT 138548 Query 195712 AGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGC 195771 |||| ||||| || ||||| |||| ||| ||||| || || || |||||||| || | Sbjct 138549 AGTT---ACTGTTCCAGCTTATTTCAATGACTCACAGCGTCAAGCAACAAAGGATGCAGG 138605 Query 195772 TGCTATTGCGGGTCTAAACTGT-CTTAGAATTATCAATGAACCAACAGCGGCTGCAATTG 195830 ||| ||||| ||| | || ||| | ||||| || || || ||||| || ||||| |||| Sbjct 138606 TGCAATTGCTGGTTTGAA-TGTAATGAGAATCATTAACGAGCCAACTGCAGCTGCTATTG 138664 Query 195831 CTTATGGTCTGGACAAGAACAAGGAC-GAAGATAAAAATGTATTGATCTTTGATCTCGGT 195889 |||||||||| || ||||| | | || | || | ||||||||||||||| ||| | ||| Sbjct 138665 CTTATGGTCTTGATAAGAA-AGGAACTGGCGAGAGAAATGTATTGATCTTCGATTTAGGT 138723 Query 195890 GGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCT 195949 |||||||| |||||||| ||| | | | |||||||| |||||| || ||||| || ||| Sbjct 138724 GGTGGTACTTTTGATGTATCATTATTAACTATTGAAGATGGTATTTTTGAAGTTAAAGCT 138783 Query 195950 ACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGT--CATT 196007 || |||||||||||||| | |||||||||||||| ||| | || ||| ||| Sbjct 138784 ACCGCTGGTGATACTCACTTGGGTGGTGAAGATTTTGATAACAGACT----CGTAGAATT 138839 Query 196008 -TGTCT-GATGAGTTCCGTCGAAAGAATA-AG--AAAGATATTTCTGGAAATCCTAGGGC 196062 ||| | | || ||| ||||||||| || | ||| | | |||| |||| || Sbjct 138840 CTGTGTACAAGATTTCAAGAGAAAGAATAGAGGTATGGATTTAACCACAAATGCTAGAGC 138899 Query 196063 TCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCA 196122 | | | | || || ||| ||| || ||||| || ||||| | || ||| | |||| Sbjct 138900 TTTAAGAAGACTCAGAACTCAATGCGAGCGTGCAAAGAGAACTTTGTCATCTTCTACTCA 138959 Query 196123 AACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACA---ACTATTAC 196179 | | | ||||| | ||||| | | ||| || ||||| ||| || | || | Sbjct 138960 AGCTACAATTGAGTTAGATTCACTCTATGAAGGTATTGA---TTATTCAGTTGCCATCAG 139016 Query 196180 CCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTT--TAGGAAGTGTATGGAACCTGTT 196237 | || | || ||||| | | |||||| || | || | || | || ||| Sbjct 139017 TAGAGCTAGATTCGAAGAACTCTGCGCTGATTACTTCCGTGCAACTTTA--GCTCCAGTT 139074 Query 196238 GAACAAGTACTTCGTGACGCAAAGATGGATAAG---TCTAAGGTTGATGAAATTGTCCTT 196294 || ||||||| || || ||||| ||| ||| || |||| |||| | Sbjct 139075 GAGAAAGTACTCAAGGATGCTGGTATGGACAAGAGATCT---GTACATGATGTTGTATTG 139131 Query 196295 GTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAAT 196354 || || || || || |||||||| ||| |||| || || ||||| || | Sbjct 139132 GTTGGTGGTTCTACACGTATTCCAAAGGTTCAGGCCTTGATTCAGGAATTCTTTAACGGT 139191 Query 196355 AAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAG 196414 ||||| | |||| | ||||| || || ||||| |||||||||||||| || || || Sbjct 139192 AAAGAGCCATGCAAAGCAATCAATCCAGACGAAGCTGTTGCTTATGGTGCTGCTGTACAA 139251 Query 196415 GCTGCTATTCTCTCAGGTGTTGA-CAAT--AATAACGTCCAAGATCTTCTGCTACTTGAT 196471 ||||||| ||| | || ||| |||| | ||| || ||||| | || | ||| Sbjct 139252 GCTGCTA---TCTTAAATGGTGAGCAATCCTCTGCCGTACAGGATCTCTTATTATTGGAT 139308 Query 196472 GTTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGAT 196531 ||||| || |||| || ||| | ||||| || |||||||||||||| || ||||||| Sbjct 139309 GTTGCTCCATTATCACTCGGTTTAGAAACTGCTGGTGGTGTTATGACCAAGCTTATTGAA 139368 Query 196532 AGGAACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAA 196591 | || |||||||| || | |||||| ||||||||| | || ||| | ||||| || Sbjct 139369 CGTAATACAACTATCCCAGCAAAGAAGACACAAGTCTTCACTACTTATGCTGATAACCAG 139428 Query 196592 CCAGGTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTA 196651 ||||| || ||||| ||||| || || | || | |||||||||||||| Sbjct 139429 AGTGGTGTCTTGATCCAAGTTTATGAGGGTGAGAGAGCCATGACTAAGGATAACCATCTC 139488 Query 196652 CTTGGAACTTTCGAT-TTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAA 196710 || |||| ||| || |||| || |||||| | ||||| |||||||| ||||| ||| | Sbjct 139489 CTCGGAAAGTTCCATCTTGA-TGGTATTCCACCAGCACCAAGAGGTGTACCACAAATTGA 139547 Query 196711 TGTTTGCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTC 196770 || ||| ||||| || || ||||| || | || || | |||| || ||| | | Sbjct 139548 AGTCACCTTTGATATTGATGCTAATGGTATCTTGAATGTGTCTGCTGTTGATAAGAGTAC 139607 Query 196771 TGGCAA-ATCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAA 196829 ||| || | | | ||||| ||||| || || ||||| | | || ||||| || | Sbjct 139608 TGGTAAGAGCAG-CAAGATCACTATTACTAACGATAAGGGTAGATTATCAAAGGACGATA 139666 Query 196830 TTGAACGTATGGTTCAAGATGCGGAAAAGTACAGGGAAGAAGACGAG 196876 |||||||||||||| | ||||| || || |||| || || || ||| Sbjct 139667 TTGAACGTATGGTTAATGATGCTGAGAAATACAAGGGTGAGGATGAG 139713 >seq1 Length=1277761 Score = 408 bits (452), Expect = 6e-109 Identities = 1052/1576 (67%), Gaps = 56/1576 (4%) Strand=Plus/Plus Query 195298 AGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCG 195357 || |||||||||||||||||| |||||||| |||||||||||| | | | |||| | | Sbjct 80402 AGTTATTGGTATCGATTTAGGTACTACTTATTCATGTGTTGGTATCTACAAGAATGGTAG 80461 Query 195358 TGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTAC 195417 ||||||||||| || ||||| ||||| || |||| || ||||| || || | || || Sbjct 80462 AGTAGAGATTATTCCAAATGAACAAGGTAATCGTATTACACCATCATATGTATCATTCAC 80521 Query 195418 AGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAA 195477 ||| |||| | | |||| || | || || ||||| | |||| || || | | Sbjct 80522 TGATGATGAGAGATTGATTGGTGAATCAGCCAAGAATCAAGCTACTATCAATCCAGTTCA 80581 Query 195478 TACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGA 195537 ||| | || || | ||| | ||||||||||| ||| |||| | |||||| | Sbjct 80582 GACTTTGTTCGATGTAAAGAGACTTATTGGTCGTCGCTTTAAGGATGATTCCGTCCAAAA 80641 Query 195538 CGATATAAAGGACTGGTCT----TATGAAGTTGTTCCCGGTG-TGGCTGATAAGCCTATG 195592 |||| |||| || ||||| || || | | | || |||||| Sbjct 80642 GGATAA----GACTTTGCTACCATATGAGATTATTAACAAAGATAGC----AAGCCTTAC 80693 Query 195593 ATTAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATG 195652 || | ||| || | ||||||||||| ||||| || || ||||| |||| ||||| Sbjct 80694 ATACAAGTTTCTGTTAAGGGTGAGAAGAAGCAATTAGCCCCAGAAGAGGTTTCAGCTATG 80753 Query 195653 GTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCA 195712 || ||| | ||||||||||| | ||| || ||| | ||||| || || ||||| Sbjct 80754 GTCTTGGTCAAGATGAAGGAAATTGCTGAGGCTTATCTCGGTAAGGAAGTAAAGCATGCA 80813 Query 195713 GTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCT 195772 ||| | ||||| || |||||||| | |||| | || || ||||| || ||||| |||| | Sbjct 80814 GTTATTACTGTCCCAGCTTACTTTAATGATGCTCAGCGTCAGGCTACCAAGGATGCTGGT 80873 Query 195773 GCTATTGCGGGTCTAAACTGT-CTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGC 195831 |||||||| ||| | || ||| || | ||||| ||||| |||||||| || |||||||| Sbjct 80874 GCTATTGCCGGTTTGAA-TGTAATTCGTATTATTAATGAGCCAACAGCAGCAGCAATTGC 80932 Query 195832 TTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGG 195891 || |||| |||||||||| || ||||| | | || | | ||| | ||||| Sbjct 80933 TTTTGGTTTGGACAAGAAGGCTGA-GAAGAGCA-----TTTTAGTATACGATTTGGGTGG 80986 Query 195892 TGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTAC 195951 |||||| |||||||| || || | | ||||| ||| | ||||| || ||||| Sbjct 80987 TGGTACTTTTGATGTTTCTCTCTTGACCATTGATAACGGTGTTTTCGAGGTCGTTGCTAC 81046 Query 195952 TGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCA-TTTGT 196010 ||||||||| ||| | || ||||| ||||||||| | || | || ||| | Sbjct 81047 AAGTGGTGATACCCATTTGGGAGGTGAGGATTTCGATCAGAGAGTTATGGACCACTTTAT 81106 Query 196011 C-TGATGAGTTCCGTCGAAAGAATAAGAAA-GAT---ATTTCTGGAAATCCTAGGGCTCT 196065 | ||| | | ||| |||| | | |||| ||| | |||| || || || || Sbjct 81107 CAAGATCA-TCAAGTC-AAAG-ACAGGAAAGGATGTAAAGTCTGACAA---GAGAGCCCT 81160 Query 196066 TCGTCGGCTTAGGACTGCATGTGAACGTGCCAAA-CGAACTCTCTCTTCTACGGCTCAAA 196124 || |||||||| | | || | | |||| || |||| ||||| | | ||| Sbjct 81161 TCAGAAGCTTAGGAGAG-AGGTCGAGAAGTCAAAGAGAGCTCTTTCTTCAGCTCCACAAG 81219 Query 196125 CAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTG 196184 | ||| |||||||| ||| | || | | || || ||| | ||| | | Sbjct 81220 TTAAGGTCGAGATTGAAGGTTTGATGGAGGATGTAGATTTGAGCGAAACCTTGACCAGAG 81279 Query 196185 CACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAG 196244 | || || ||||| || |||| ||||| || ||| ||| || || ||| || ||| Sbjct 81280 CTAAATTCGATGAGTTGAATGCTGACTTGTTCAGAAAGACTATCGAGCCAGTT-AAGAAG 81338 Query 196245 TACTTCG-TGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGA 196303 || | || || || | |||||| | || ||||| || || | || || || Sbjct 81339 GTTTTGGAGGATGCTGGAATCAAAAAGTCTGAAGTAGATGAGATCGTTTTGGTTGGTGGT 81398 Query 196304 TCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAG--CTTCTTCAATAATAAAGATT 196361 || || ||||| || ||||||||| || || || ||||| || || || Sbjct 81399 TCTACTCGTATCCCTAAGATTCAAGCCTTG--ATCAAGGAGTTCTTTGATGGAAAGGAGC 81456 Query 196362 TAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTA 196421 ||||| | || ||||| |||||||| || ||||||||||| ||||| || |||| || Sbjct 81457 CAAACAGAGGAATTAACCCAGATGAAGCCGTCGCTTATGGTGCTGCCGTACAAGCTGGTA 81516 Query 196422 TTCTCTCAGGTGTTGACAATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCG 196481 | | |||||| | | || | ||| | | || | |||||| | || Sbjct 81517 TCTTAGCAGGTGAAGGCGGTAGT---------GATTTATTATTATTGGATGTTACTCCTT 81567 Query 196482 TATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAA 196541 || | | ||| |||| || | ||||| |||||||| || | |||| ||| ||||| Sbjct 81568 TAACTTTAGGTATTGAGACTGTTGGTGGAGTTATGACAAAGCTCATTGGTAGAAACACTG 81627 Query 196542 CTATTCCGACTAAGAAGGAACAAGTCTTTTCA--ACGTATTCCGATAATCAACCAGGTGT 196599 | |||| || |||||| |||| |||||| || || |||||||| |||| ||| Sbjct 81628 TTGTTCCAACCAAGAAGAGCCAAG--TTTTCAGTACTTACCAAGATAATCAGCCAGCTGT 81685 Query 196600 TCATATTCAAGTATATGAAGGAGAACGCTCCCGTG-CAAAGGATAACCATCTACTTGGAA 196658 | ||| || || ||||| || || || ||| || | ||||||||| |||| ||||||| Sbjct 81686 ACTTATCCAGGTTTATGAGGGTGAGCG-TCCAATGACTAAGGATAACAATCTCCTTGGAA 81744 Query 196659 CTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCT 196718 ||||| | | || || ||| | || || ||||||||||| || ||| | ||| | Sbjct 81745 AATTCGAGCTTTCTGGAATCCCACCAGCTCCAAGAGGTGTTCCCCAAATTGAGGTTACTT 81804 Query 196719 TCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAAT 196778 | || || || | |||| ||| || | || | || |||| |||| | |||| |||| Sbjct 81805 TTGAAATTGATACTGATGGTATTTTACAAGTTAGTGCAAAGGATAAGGGTACTGGTAAAT 81864 Query 196779 CTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTA 196838 |||| |||||| || || ||||| ||||| | || || |||| || || || |||| Sbjct 81865 CTGAGAAGATTACTATCACAAATGATAAGGGTAGACTCTCACAGGAAGACATAGAGCGTA 81924 Query 196839 TGGTTCAAGATGCGGA 196854 || || | || || || Sbjct 81925 TGATTAAGGAGGCTGA 81940 >seq16 Length=842072 Score = 170 bits (188), Expect = 3e-37 Identities = 175/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 171861 TATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTC 171920 |||||| || ||||| || || | || ||||| |||||||| | || ||||| | || Sbjct 531015 TATGCAGATTTTTGTTAAGACTTTGACAGGAAAGACTATCACTTTGGAAGTTGAACCTTC 531074 Query 171921 AGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCA 171980 ||| ||||| || || | || || |||||||||||||||||||| || ||||| ||||| Sbjct 531075 AGATACAATTGAGAATGTTAAGGCAAAGATTCAAGATAAGGAAGGAATCCCACCTGATCA 531134 Query 171981 GCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAA 172040 ||||| | || ||||| || ||||| | || ||||| | || ||| |||||||||| Sbjct 531135 ACAACGTTTGATCTTTGCAGGAAAACAATTAGAGGATGGTAGAACTCTCTCTGATTACAA 531194 Query 172041 CGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 | ||||||| ||||| ||| ||||| | || || || ||| | |||||| Sbjct 531195 CATTCAAAAAGAGTCCACTTTACACTTAGTCCTGAGACTTAGAGGTGGT 531243 Score = 167 bits (184), Expect = 3e-36 Identities = 176/232 (76%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| || || || || || | || ||||| |||||||| | || |||||| Sbjct 531467 GTGGTATGCAGATTTTCGTTAAGACTTTGACAGGAAAGACTATCACTTTGGAAGTTGAGC 531526 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | ||||| ||||| || || | || || |||||||||||||||||||| || ||||| | Sbjct 531527 CTTCAGATACAATTGAGAATGTTAAGGCAAAGATTCAAGATAAGGAAGGAATCCCACCTG 531586 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 |||| ||||| | || ||||| || ||||| | || ||||| | || ||| |||||| Sbjct 531587 ATCAACAACGTTTGATCTTTGCAGGAAAACAATTAGAGGATGGTAGAACTCTCTCTGATT 531646 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 ||||| ||||||| ||||| ||| ||||| | || || || ||| | || || Sbjct 531647 ACAACATTCAAAAAGAGTCCACTTTACACTTAGTCCTGAGACTTAGAGGCGG 531698 Score = 154 bits (170), Expect = 2e-32 Identities = 159/208 (76%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| || || || || || | || ||||| |||||||| | || |||||| Sbjct 531239 GTGGTATGCAGATTTTCGTTAAGACTTTGACAGGAAAGACTATCACTTTGGAAGTTGAGC 531298 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | ||||| ||||| || || | || || ||||||||||||||||| || || ||||| | Sbjct 531299 CTTCAGATACAATTGAGAATGTTAAGGCAAAGATTCAAGATAAGGAGGGAATCCCACCTG 531358 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 |||| ||||| | || ||||| || ||||| | || ||||| | || ||| |||| | Sbjct 531359 ATCAACAACGTTTAATCTTTGCAGGAAAACAATTAGAGGATGGTAGAACTCTCTCTGACT 531418 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACA 172064 ||||| ||||||| ||||||||| |||| Sbjct 531419 ACAACATTCAAAAAGAGTCTACTTTACA 531446 >seq11 Length=1218479 Score = 111 bits (122), Expect = 2e-19 Identities = 1145/1828 (63%), Gaps = 46/1828 (3%) Strand=Plus/Plus Query 77870 GACTTTGAATTTGGGTATTTTGGATTGAAGACTCTCGAAAAAAGTTACCTGCAGTACATG 77929 || ||||||| | ||||||| || || ||||| |||| | || || | | || Sbjct 361197 GATTTTGAATACGATTATTTTGCCTTCAAAACTCTAGAAAGATCCTATCTTCTTAAAATT 361256 Query 77930 GATGGAAAGCTCATGGAGACACCTCAATACTTATTCATGCGTGTTTCTATTGGTATTCAT 77989 || || | |||| | ||| ||| | | | ||||| || ||| |||||||||| Sbjct 361257 GACAACAAAGTTGTGGAAAGACCACAACATCTTCTGATGCGGGTCTCTTGTGGTATTCAT 361316 Query 77990 GGAAATGATATTCCAGCGGTACTTGAAACGTATGATAAAATGTC-CAATGGTATGTTTAT 78048 | ||||||| ||| | ||||||||| ||||| | || ||| ||| |||| Sbjct 361317 TGTGGTGATATTGAAGCTGCACTTGAAACATATGAGTTGTTATCGCAAAAATAT-TTTAC 361375 Query 78049 TCACGCAACACCTACTTTGTTTAATGCAGGTACTCCCCGTCCACAGATGTCATCTTGTTT 78108 ||| |||||||| || | |||||| |||| ||||| || || || |||||||||||||| Sbjct 361376 TCATGCAACACCCACACTCTTTAATTCAGGCACTCCACGACCTCAAATGTCATCTTGTTT 361435 Query 78109 CCTACTTGCAAATAAGGAGGACTCTATTAATGGTATATACGGGACTCTCACAGAGTGTGC 78168 |||| | | || || || || || ||||| | | || || || | || || Sbjct 361436 TTTACTCAGGATTCCAGAAGATTCAATAAACGGTATCTTTGACACACTAACTAAATGCGC 361495 Query 78169 TCAGATTTCTAAGTGGGCTGGTGGTATAGGTCTTCATATTCACGATGTTCGTGCAAACAA 78228 | ||| |||| || |||||| | || | | || || | | ||| Sbjct 361496 AAACATTAGTAAGACTGCGGGTGGTCTTGGGGTGGCAGTGAGTAATATTAGAG-GAACTG 361554 Query 78229 GTCCA-GGATTAGAGGAACTAATGGTCAGTCTGATGGAATTATTCCTATGCTTAGGGTAT 78287 || || ||| ||||||| ||||| ||| ||||| | ||||| ||||| | || | Sbjct 361555 GTTCATATATTCGAGGAACAAATGGGAGATCTAATGGATTAATTCCGATGCTGCGCGTTT 361614 Query 78288 TCAATGCTACAGCACGCTATGTCAACCAAGCGGGTCGTAGG----AAGGGGTCATTCGCT 78343 |||| || || | ||| | | |||| || | | | |||| | |||| || Sbjct 361615 ATAATGACACTGCTAGGTATATTGATCAAGGTGGAGGGAAGCGTAAAGGTGCCATT-GCA 361673 Query 78344 ATGTACCTTGAACCTTGGCACGCCGATGTAATGGATTTTTTGGAACTTCGTCTCAACCAG 78403 || || | || || ||||||| ||||| | || ||| | ||| | | || || Sbjct 361674 ATTTATTTGGAGCCGTGGCACGTTGATGTTGTAGAGTTTATTGAAATCAGGAAGAATCAC 361733 Query 78404 GGTGACGAGGAAGCTCGATGCAGGGATTTATTCACTGCTATGTGGATTCCGGATCTTTTT 78463 || | || || |||| | ||| | || |||| | ||| |||| ||||| || Sbjct 361734 GGAAAGGAAGAGATGAGATGTCGCGATCTCTTTCCTGCCCTTTGGGTTCCTGATCTGTTC 361793 Query 78464 ATGAAGAGAGTTGAGGAAGGAGGTA-AATGGTCTCTTTTCTGTCCAGATAAGACTAAGGG 78522 ||| | |||||||| |||||| | | ||| |||| | || |||||| | | |||| Sbjct 361794 ATGGAAAGAGTTGA-GAAGGATCAAGATTGGACTCTAATGTGCCCAGATGA-ATGCAGGG 361851 Query 78523 TCTTTC-AGATGTATACGGGGAAGAATTCGAAAAATTGTACACTAAATACGAAGAGGAAG 78581 || | |||||| | || || || || | || | || | || || | ||| Sbjct 361852 GATTGCAAGATGTTTGGGGCGATGATTTTAAGAAGCTATATGAAGAGTATGAGAAACAAG 361911 Query 78582 GTCTCGCTATTAAGACAATTGATGCATCTGAACTATGGAAAGCTATTATCAAAAG-TCAA 78640 | | | | || || || | || |||| ||| || | | | | | |||| Sbjct 361912 GCCGTGGAAGGAAAACGATGAAAGCGCAGAAACTTTGG-TTCTTAATCTTACAGGCTCAA 361970 Query 78641 ACAGAGACCGGCACCCCGTATATGCTATACAAAGACAGCTG-TAACAGAAAGTCTAACCA 78699 | ||||| || || || | ||| || ||||| |||| || || || |||||| Sbjct 361971 ATTGAGACGGGGACACCATTTATTTGTTATAAAGA-TGCTGCAAATAGCAAAAGTAACCA 362029 Query 78700 AAAGAACCTAGG---TGTCATCAAAAGCTCTAACCTTTGCACAGAAATTCTGGAATACAC 78756 || || | || | | | ||| |||| | ||||||||||| | |||||||| Sbjct 362030 GAAAAATTTGGGAACTATTGTTTCAAG---TAACTTATGCACAGAAATCATAGAATACAC 362086 Query 78757 GGATAAGAATGAAACAGCTGTATGTAATCTAGGGTCTATCGCTCTACCAAAGTTTGTTGA 78816 | | | ||| || || |||||||| | |||||| | || ||||| || ||||| Sbjct 362087 TAGCACGGACGAAGTTGCCGTCTGTAATCTGGCGTCTATTGGCCTTCCAAAATTCGTTGA 362146 Query 78817 TCGAGAATTA-AAGACATTTGATTATTCAAAGCTCCACGAAATTACAAAAATCGTAACTA 78875 | | ||| | ||||| ||||||| | ||| | | ||| |||| || | | || | Sbjct 362147 T-AAAAATAACAAGACGTTTGATTTTGATAAGTTAAAAGAAGTTACGAAGGTGATTACGA 362205 Query 78876 AAAATTTAAATCGTGTAATTGACCGTAACTACTACCCAGTC-GAGACTGCTAAATATTCT 78934 ||||| ||| | |||||| | || || | || ||| || |||| | || Sbjct 362206 GGAATTTGAATAAATTGATTGACGTTGGATATTATTCTCTCAAAGAGTG-TAAAAAATCG 362264 Query 78935 AATATGAAACATAGACCAATTGGTCTAGGTGTTCAAGGATTGGCAGA-TGTATTCAACTT 78993 ||| | | |||| | ||| | || | || ||||||| | ||||| ||| || | | Sbjct 362265 AATTTAAGACATCGTCCATTGGGGATTGGCATTCAAGGGCTCGCAGACTGT-TTTATGAT 362323 Query 78994 GTGTGGTCTTCCCTTCGATTGCGAAGATTCAAGGACTATGAATGCTCATATTTTCGAGAC 79053 | | || | || | ||| | || | | | || | ||| || ||||| || Sbjct 362324 GCTTCGTATGCCGTACGAGTCTGAGGGAGCTAAGAAGTTAAATAAACAAATTTTTGAAGT 362383 Query 79054 TATTTATCATGCAGCTTTAGAAGCAAGTTCAGAACTTGCTGAAATTAATGGGCCTTATGA 79113 ||| ||| |||||||| | || || || | || ||||| |||| | ||||| || || Sbjct 362384 TATCTATTATGCAGCTCTCGACGCTAGCTGTGAGCTTGCAGAAAAATACGGGCCATACGA 362443 Query 79114 GAGTTTCGAGGGTTCACCCGCTTCACAAGGTCTTCTTCAACCAGATCTATGGGAAGGTGA 79173 | | ||||| || || | ||| || | ||| ||| | |||| || | Sbjct 362444 AACATATTCCGGTTCGCCTGCGAGTAAGGGTATTTTACAATTTGATATGTGGGGAGTTAC 362503 Query 79174 AGCTAAATACAGTGGTCGTTACGATTGGGA--TGCAATGAGAAAGCGTGTAATGACGAAG 79231 | | | || ||| | || |||||||| ||| ||| || | | || | Sbjct 362504 ACC---AGACTCTGGACTTTGTGATTGGGATTTGCTTAAAGATAGGATTTCCAAAC--AT 362558 Query 79232 GGTCTGAGAAACAGTCTTCTCGTAGCACCAATGCCCACTGCTTCGACGGCTCAGATCCTC 79291 ||| | | || ||| | || | |||||||| || || || || | || || | Sbjct 362559 GGTATTCGTAATTCTCTATTAATATCTCCAATGCCAACAGCATCCACTTCGCAAATTTTA 362618 Query 79292 GGTAATAATGAGTGTTTTGAACCATACACTACAAACATATATCTTCGTCGCACATTAGCT 79351 ||||| |||||| ||||||| |||| || | ||||| |||| |||| | | || || Sbjct 362619 GGTAACAATGAGAGTTTTGAGCCATTTACCTCGAACATTTATCATCGTAGAGTACTATCT 362678 Query 79352 GGTGAATTTGTTGTGGTTAACAAACATCTTGTTGAA-GATTT-GAAGAAGTTAGGTCTTT 79409 ||||| || |||| || || ||| ||| | || ||||| ||| || ||| | Sbjct 362679 GGTGAGTTCTTTGTAGTAAATCCGCAT-TTGCTAAATGATTTACTAGAGCTTGGGTTATG 362737 Query 79410 GGTCAAAAGAGATGAA--AGACT-TAATGGTCAAAGCCGGAGGGAGTGTGCAAAACATAG 79466 || | || | | || ||| | | || | |||| || ||| | ||||| ||| Sbjct 362738 GGATGATAG-GCTTAAGCAGAATATTATTG-CAAA--TAATGGCAGTATTCAAAATATAC 362793 Query 79467 TAGAGATACCAGATAATATTAAAAATCTTTATAAGACTGTTTGGGAAATTAGCCAAAAAT 79526 | || || || |||| | |||||||||||||| |||||||||| ||||| Sbjct 362794 TTACAATTCCGGAAGATATACGCGAGCTTTATAAGACTGTATGGGAAATTAAGCAAAAGA 362853 Query 79527 GTATTATCGACATGGCAGCGGACAGGGGTCGTTTTATCTGTCAATCACAATCTATGAATT 79586 | || || ||||| || || ||||||| | | | |||||||| |||||| |||| Sbjct 362854 CAGTAATTGATATGGCTGCAGATAGGGGTCCATATGTTTGTCAATCGCAATCTTTGAACA 362913 Query 79587 TGTTTTTAGAGTCACCTACAATTGGAAAAATATCCTCTATGCACATGTATGCGTGGAAGT 79646 | | | || ||| ||| ||| |||| |||||||| | |||| ||||| Sbjct 362914 TTCATATGGAAAATGCTAACTTTGCAAAGTTATCATCTATGCATTTTTATGGTTGGAAAA 362973 Query 79647 CTGGACTCAAGACAGGTATGTACTACTT 79674 || || || ||||| || || || || Sbjct 362974 AAGGTCTAAAAACAGGCATTTATTATTT 363001 >seq13 Length=1010751 Score = 102 bits (112), Expect = 1e-16 Identities = 200/296 (68%), Gaps = 0/296 (0%) Strand=Plus/Minus Query 196454 GATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTT 196513 |||||| || |||| || ||| ||||| |||| | ||| ||||||| |||||| ||| Sbjct 774208 GATCTTTTGTTACTCGACGTTACACCCTTATCTTTAGGTATTGAAACTTTGGGTGGAGTT 774149 Query 196514 ATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCA 196573 | ||| | | ||| | || || || || || || ||||| ||| ||||| || || Sbjct 774148 TTTACTCGATTAATTAACAGAAATACCACAATACCTACTAAAAAGAGCCAAGTATTCTCC 774089 Query 196574 ACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGT 196633 || | | || |||||| | ||| ||| |||| | |||||||| | | Sbjct 774088 ACTGCTGCAGACAATCAAACTCAAGTTGGAATTAAAGTTTTCCAAGGAGAAAGAGAATTT 774029 Query 196634 GCAAAGGATAACCATCTACTTGGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGA 196693 || ||||| | | |||||| || || ||| ||| ||||| | ||||||||| Sbjct 774028 GCTGCTGATAATAAGTTGCTTGGACAATTTGAAATGATGGGAATTCCTCCAGCACCCAGA 773969 Query 196694 GGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAATGGAATTCTAAACGT 196749 || || || || ||| | || ||| ||||| || |||||||||||| | || || Sbjct 773968 GGGGTACCTCAAATTGAAGTCACCTTTGATATTGATGCAAATGGAATTATGAATGT 773913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657862251980960