Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20parvum_20[genbank_20GCA_5F001305455.2_202016-05- 09] 18 sequences; 9,104,817 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq16 134 1e-26 >seq16 Length=842072 Score = 134 bits (148), Expect = 1e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| |||| || | || || || ||||| || | ||||| ||| | | Sbjct 531016 ATGCAGATTTTTGTTAAGACTTTGACAGGAAAGACTATCACTTTGGAAGTTGAACCTTCA 531075 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || ||| | || | || || |||||| ||||| || |||||||| || || |||||| Sbjct 531076 GATACAATTGAGAATGTTAAGGCAAAGATTCAAGATAAGGAAGGAATCCCACCTGATCAA 531135 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||||||||||||||||| || ||||| | |||||| |||| | || ||||| ||| Sbjct 531136 CAACGTTTGATCTTTGCAGGAAAACAATTAGAGGATGGTAGAACTCTCTCTGATTACAAC 531195 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 |||||||| || || || ||||||| || Sbjct 531196 ATTCAAAAAGAGTCCACTTTACACTTAGT 531224 Score = 125 bits (138), Expect = 6e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || |||| || | || || || ||||| || | ||||| || | | Sbjct 531472 ATGCAGATTTTCGTTAAGACTTTGACAGGAAAGACTATCACTTTGGAAGTTGAGCCTTCA 531531 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || ||| | || | || || |||||| ||||| || |||||||| || || |||||| Sbjct 531532 GATACAATTGAGAATGTTAAGGCAAAGATTCAAGATAAGGAAGGAATCCCACCTGATCAA 531591 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||||||||||||||||| || ||||| | |||||| |||| | || ||||| ||| Sbjct 531592 CAACGTTTGATCTTTGCAGGAAAACAATTAGAGGATGGTAGAACTCTCTCTGATTACAAC 531651 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 |||||||| || || || ||||||| || Sbjct 531652 ATTCAAAAAGAGTCCACTTTACACTTAGT 531680 Score = 111 bits (122), Expect = 1e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || |||| || | || || || ||||| || | ||||| || | | Sbjct 531244 ATGCAGATTTTCGTTAAGACTTTGACAGGAAAGACTATCACTTTGGAAGTTGAGCCTTCA 531303 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || ||| | || | || || |||||| ||||| || || ||||| || || |||||| Sbjct 531304 GATACAATTGAGAATGTTAAGGCAAAGATTCAAGATAAGGAGGGAATCCCACCTGATCAA 531363 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||||| |||||||| || ||||| | |||||| |||| | || || || ||| Sbjct 531364 CAACGTTTAATCTTTGCAGGAAAACAATTAGAGGATGGTAGAACTCTCTCTGACTACAAC 531423 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGA 24919 |||||||| || || || |||| || || ||| || Sbjct 531424 ATTCAAAAAGAGTCTACTTTACATTTAGTATTGAGA 531459 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897498773040