Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20parvum_20[genbank_20GCA_5F001305455.2_202016-05- 09] 18 sequences; 9,104,817 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq11 100 3e-16 >seq11 Length=1218479 Score = 100 bits (110), Expect = 3e-16 Identities = 172/250 (69%), Gaps = 0/250 (0%) Strand=Plus/Plus Query 53490 ATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTG 53549 ||||| | | || ||||| ||||| | || |||| || |||| | | || |||| Sbjct 361588 ATGGATTAATTCCGATGCTGCGCGTTTATAATGACACTGCTAGGTATATTGATCAAGGTG 361647 Query 53550 GTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGG 53609 | |||||||| || || | | || || || | ||||||||||||| || || | | Sbjct 361648 GAGGGAAGCGTAAAGGTGCCATTGCAATTTATTTGGAGCCGTGGCACGTTGATGTTGTAG 361707 Query 53610 AGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTTTA 53669 ||||| | || | | |||||| || | ||||||||| | || || || || ||| Sbjct 361708 AGTTTATTGAAATCAGGAAGAATCACGGAAAGGAAGAGATGAGATGTCGCGATCTCTTTC 361767 Query 53670 CAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACC 53729 | || || ||| |||| || || |||||| ||| || |||||||| | || ||| | Sbjct 361768 CTGCCCTTTGGGTTCCTGATCTGTTCATGGAAAGAGTTGAGAAGGATCAAGATTGGACTC 361827 Query 53730 TGATGTGCCC 53739 | |||||||| Sbjct 361828 TAATGTGCCC 361837 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215876876400