Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20parvum_20[genbank_20GCA_5F001305475.1_202015-10- 01] 18 sequences; 9,085,686 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq7 86.0 6e-12 >seq7 Length=822230 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 142976 ACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCG 143035 ||||| || | || || |||||||| ||||||||||| | || || || || Sbjct 557639 ACTAAGTGTAAAGTGGACTCTTTTTGAATGTTGTAATCAGAGAGAGTTCTACCATCCTCT 557580 Query 143036 AGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTA 143095 | |||||| || ||| |||||| |||||| ||||| || || || ||||| || || | Sbjct 557579 AATTGTTTTCCTGCAAAGATCAAACGTTGTTGATCAGGTGGGATTCCTTCCTTATCTTGA 557520 Query 143096 ATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTG 143155 || ||| || | | || | || || | ||||| ||||| | ||| | ||||| Sbjct 557519 ATCTTTGCCTTAACATTCTCAATTGTATCTGAAGGTTCAACTTCCAAAGTGATAGTCTTT 557460 Query 143156 CCGGTCAATGTTTTTACGAATATTTGCATA 143185 || ||||| || || || || || |||||| Sbjct 557459 CCTGTCAAAGTCTTAACAAAAATCTGCATA 557430 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 142976 ACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCG 143035 ||||| || | || || |||||||| ||||||||||| | || || || || Sbjct 558540 ACTAAGTGTAAAGTGGACTCTTTTTGAATGTTGTAATCAGAGAGAGTTCTACCATCCTCT 558481 Query 143036 AGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTA 143095 | |||||| || ||| |||||| |||||| ||||| || || || ||||| || || | Sbjct 558480 AATTGTTTTCCTGCAAAGATCAAACGTTGTTGATCAGGTGGGATTCCTTCCTTATCTTGA 558421 Query 143096 ATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTG 143155 || ||| || | | || | || || | ||||| ||||| | ||| | ||||| Sbjct 558420 ATCTTTGCCTTAACATTCTCAATTGTATCTGAAGGTTCAACTTCCAAAGTGATAGTCTTT 558361 Query 143156 CCGGTCAATGTTTTTACGAATATTTGCATA 143185 || ||||| || || || || || |||||| Sbjct 558360 CCTGTCAAAGTCTTAACAAAAATCTGCATA 558331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507014285921760