Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20parvum_20[genbank_20GCA_5F001305475.1_202015-10- 01] 18 sequences; 9,085,686 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq13 605 4e-168 seq1 408 6e-109 seq7 170 3e-37 seq2 111 2e-19 seq4 102 1e-16 >seq13 Length=102098 Score = 605 bits (670), Expect = 4e-168 Identities = 1114/1607 (69%), Gaps = 47/1607 (3%) Strand=Plus/Plus Query 195295 TCAAGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGA 195354 || |||||||||||| |||||||| || || ||||||||||||||||||||| ||| || Sbjct 3610 TCCAGCTATTGGTATTGATTTAGGTACCACATACTCATGTGTTGGTGTATGGAGAAACGA 3669 Query 195355 TCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTT 195414 | |||||| ||| | || || || ||||| ||||||||||| ||||| || || || || Sbjct 3670 TACTGTAGATATTGTTCCAAACGATCAAGGTAACCGTACAACACCATCATATGTAGCATT 3729 Query 195415 TACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTAT 195474 |||||| | ||| ||||| |||| ||||| ||||| || || |||| ||||| Sbjct 3730 TACAGAAACTGAGCGTCTTATTGGTGATGCAGCAAAGAACCAAGTTGCTAGAAACCCAGA 3789 Query 195475 CAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCA 195534 ||||| || ||||| || || |||||||||||| | |||||| ||| || ||| || Sbjct 3790 AAATACAGTTTTTGATGCTAAACGTCTTATTGGTAGAAAGTTTGATGATCAGGCAGTACA 3849 Query 195535 AGACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGAT 195594 | ||||| | ||||| | | | |||| ||| ||| || ||||| || || Sbjct 3850 AAGTGATATGACTCACTGGCCATTTAAAGTAGTTAGAGGTCCAAAGGACAAGCCAATCAT 3909 Query 195595 TAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGT 195654 | ||| | | ||||| ||||| |||| | | ||||||||||| ||||||| Sbjct 3910 CAGTGTAAACTACTTAGGTGAAAAGAAGGAATTCCATGCTGAAGAAATTTCTGCTATGGT 3969 Query 195655 GTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGT---AAAACTGTGAAAGATGC 195711 || ||||||||||||| | ||| | | | ||||| ||| | ||| | || Sbjct 3970 TTTACAAAAGATGAAGGAGATCTCTGAAGCATACTTGGGTCGCCAAATTAAGAACGCTGT 4029 Query 195712 AGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGC 195771 |||| ||||| || ||||| |||| ||| ||||| || || || |||||||| || | Sbjct 4030 AGTT---ACTGTTCCAGCTTATTTCAATGACTCACAGCGTCAAGCAACAAAGGATGCAGG 4086 Query 195772 TGCTATTGCGGGTCTAAACTGT-CTTAGAATTATCAATGAACCAACAGCGGCTGCAATTG 195830 ||| ||||| ||| | || ||| | ||||| || || || ||||| || ||||| |||| Sbjct 4087 TGCAATTGCTGGTTTGAA-TGTAATGAGAATCATTAACGAGCCAACTGCAGCTGCTATTG 4145 Query 195831 CTTATGGTCTGGACAAGAACAAGGAC-GAAGATAAAAATGTATTGATCTTTGATCTCGGT 195889 |||||||||| || ||||| | | || | || | ||||||||||||||| ||| | ||| Sbjct 4146 CTTATGGTCTTGATAAGAA-AGGAACTGGCGAGAGAAATGTATTGATCTTCGATTTAGGT 4204 Query 195890 GGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCT 195949 |||||||| |||||||| ||| | | | |||||||| |||||| || ||||| || ||| Sbjct 4205 GGTGGTACTTTTGATGTATCATTATTAACTATTGAAGATGGTATTTTTGAAGTTAAAGCT 4264 Query 195950 ACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGT--CATT 196007 || |||||||||||||| | |||||||||||||| ||| | || ||| ||| Sbjct 4265 ACCGCTGGTGATACTCACTTGGGTGGTGAAGATTTTGATAACAGACT----CGTAGAATT 4320 Query 196008 -TGTCT-GATGAGTTCCGTCGAAAGAATA-AG--AAAGATATTTCTGGAAATCCTAGGGC 196062 ||| | | || ||| ||||||||| || | ||| | | |||| |||| || Sbjct 4321 CTGTGTACAAGATTTCAAGAGAAAGAATAGAGGTATGGATTTAACCACAAATGCTAGAGC 4380 Query 196063 TCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCA 196122 | | | | || || ||| ||| || ||||| || ||||| | || ||| | |||| Sbjct 4381 TTTAAGAAGACTCAGAACTCAATGCGAGCGTGCAAAGAGAACTTTGTCATCTTCTACTCA 4440 Query 196123 AACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACA---ACTATTAC 196179 | | | ||||| | ||||| | | ||| || ||||| ||| || | || | Sbjct 4441 AGCTACAATTGAGTTAGATTCACTCTATGAAGGTATTGA---TTATTCAGTTGCCATCAG 4497 Query 196180 CCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTT--TAGGAAGTGTATGGAACCTGTT 196237 | || | || ||||| | | |||||| || | || | || | || ||| Sbjct 4498 TAGAGCTAGATTCGAAGAACTCTGCGCTGATTACTTCCGTGCAACTTTA--GCTCCAGTT 4555 Query 196238 GAACAAGTACTTCGTGACGCAAAGATGGATAAG---TCTAAGGTTGATGAAATTGTCCTT 196294 || ||||||| || || ||||| ||| ||| || |||| |||| | Sbjct 4556 GAGAAAGTACTCAAGGATGCTGGTATGGACAAGAGATCT---GTACATGATGTTGTATTG 4612 Query 196295 GTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAAT 196354 || || || || || |||||||| ||| |||| || || ||||| || | Sbjct 4613 GTTGGTGGTTCTACACGTATTCCAAAGGTTCAGGCCTTGATTCAGGAATTCTTTAACGGT 4672 Query 196355 AAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAG 196414 ||||| | |||| | ||||| || || ||||| |||||||||||||| || || || Sbjct 4673 AAAGAGCCATGCAAAGCAATCAATCCAGACGAAGCTGTTGCTTATGGTGCTGCTGTACAA 4732 Query 196415 GCTGCTATTCTCTCAGGTGTTGA-CAAT--AATAACGTCCAAGATCTTCTGCTACTTGAT 196471 ||||||| ||| | || ||| |||| | ||| || ||||| | || | ||| Sbjct 4733 GCTGCTA---TCTTAAATGGTGAGCAATCCTCTGCCGTACAGGATCTCTTATTATTGGAT 4789 Query 196472 GTTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGAT 196531 ||||| || |||| || ||| | ||||| || |||||||||||||| || ||||||| Sbjct 4790 GTTGCTCCATTATCACTCGGTTTAGAAACTGCTGGTGGTGTTATGACCAAGCTTATTGAA 4849 Query 196532 AGGAACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAA 196591 | || |||||||| || | |||||| ||||||||| | || ||| | ||||| || Sbjct 4850 CGTAATACAACTATCCCAGCAAAGAAGACACAAGTCTTCACTACTTATGCTGATAACCAG 4909 Query 196592 CCAGGTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTA 196651 ||||| || ||||| ||||| || || | || | |||||||||||||| Sbjct 4910 AGTGGTGTCTTGATCCAAGTTTATGAGGGTGAGAGAGCCATGACTAAGGATAACCATCTC 4969 Query 196652 CTTGGAACTTTCGAT-TTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAA 196710 || |||| ||| || |||| || |||||| | ||||| |||||||| ||||| ||| | Sbjct 4970 CTCGGAAAGTTCCATCTTGA-TGGTATTCCACCAGCACCAAGAGGTGTACCACAAATTGA 5028 Query 196711 TGTTTGCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTC 196770 || ||| ||||| || || ||||| || | || || | |||| || ||| | | Sbjct 5029 AGTCACCTTTGATATTGATGCTAATGGTATCTTGAATGTGTCTGCTGTTGATAAGAGTAC 5088 Query 196771 TGGCAA-ATCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAA 196829 ||| || | | | ||||| ||||| || || ||||| | | || ||||| || | Sbjct 5089 TGGTAAGAGCAG-CAAGATCACTATTACTAACGATAAGGGTAGATTATCAAAGGACGATA 5147 Query 196830 TTGAACGTATGGTTCAAGATGCGGAAAAGTACAGGGAAGAAGACGAG 196876 |||||||||||||| | ||||| || || |||| || || || ||| Sbjct 5148 TTGAACGTATGGTTAATGATGCTGAGAAATACAAGGGTGAGGATGAG 5194 >seq1 Length=1198458 Score = 408 bits (452), Expect = 6e-109 Identities = 1052/1576 (67%), Gaps = 56/1576 (4%) Strand=Plus/Plus Query 195298 AGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCG 195357 || |||||||||||||||||| |||||||| |||||||||||| | | | |||| | | Sbjct 79909 AGTTATTGGTATCGATTTAGGTACTACTTATTCATGTGTTGGTATCTACAAGAATGGTAG 79968 Query 195358 TGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTAC 195417 ||||||||||| || ||||| ||||| || |||| || ||||| || || | || || Sbjct 79969 AGTAGAGATTATTCCAAATGAACAAGGTAATCGTATTACACCATCATATGTATCATTCAC 80028 Query 195418 AGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAA 195477 ||| |||| | | |||| || | || || ||||| | |||| || || | | Sbjct 80029 TGATGATGAGAGATTGATTGGTGAATCAGCCAAGAATCAAGCTACTATCAATCCAGTTCA 80088 Query 195478 TACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGA 195537 ||| | || || | ||| | ||||||||||| ||| |||| | |||||| | Sbjct 80089 GACTTTGTTCGATGTAAAGAGACTTATTGGTCGTCGCTTTAAGGATGATTCCGTCCAAAA 80148 Query 195538 CGATATAAAGGACTGGTCT----TATGAAGTTGTTCCCGGTG-TGGCTGATAAGCCTATG 195592 |||| |||| || ||||| || || | | | || |||||| Sbjct 80149 GGATAA----GACTTTGCTACCATATGAGATTATTAACAAAGATAGC----AAGCCTTAC 80200 Query 195593 ATTAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATG 195652 || | ||| || | ||||||||||| ||||| || || ||||| |||| ||||| Sbjct 80201 ATACAAGTTTCTGTTAAGGGTGAGAAGAAGCAATTAGCCCCAGAAGAGGTTTCAGCTATG 80260 Query 195653 GTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCA 195712 || ||| | ||||||||||| | ||| || ||| | ||||| || || ||||| Sbjct 80261 GTCTTGGTCAAGATGAAGGAAATTGCTGAGGCTTATCTCGGTAAGGAAGTAAAGCATGCA 80320 Query 195713 GTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCT 195772 ||| | ||||| || |||||||| | |||| | || || ||||| || ||||| |||| | Sbjct 80321 GTTATTACTGTCCCAGCTTACTTTAATGATGCTCAGCGTCAGGCTACCAAGGATGCTGGT 80380 Query 195773 GCTATTGCGGGTCTAAACTGT-CTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGC 195831 |||||||| ||| | || ||| || | ||||| ||||| |||||||| || |||||||| Sbjct 80381 GCTATTGCCGGTTTGAA-TGTAATTCGTATTATTAATGAGCCAACAGCAGCAGCAATTGC 80439 Query 195832 TTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGG 195891 || |||| |||||||||| || ||||| | | || | | ||| | ||||| Sbjct 80440 TTTTGGTTTGGACAAGAAGGCTGA-GAAGAGCA-----TTTTAGTATACGATTTGGGTGG 80493 Query 195892 TGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTAC 195951 |||||| |||||||| || || | | ||||| ||| | ||||| || ||||| Sbjct 80494 TGGTACTTTTGATGTTTCTCTCTTGACCATTGATAACGGTGTTTTCGAGGTCGTTGCTAC 80553 Query 195952 TGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCA-TTTGT 196010 ||||||||| ||| | || ||||| ||||||||| | || | || ||| | Sbjct 80554 AAGTGGTGATACCCATTTGGGAGGTGAGGATTTCGATCAGAGAGTTATGGACCACTTTAT 80613 Query 196011 C-TGATGAGTTCCGTCGAAAGAATAAGAAA-GAT---ATTTCTGGAAATCCTAGGGCTCT 196065 | ||| | | ||| |||| | | |||| ||| | |||| || || || || Sbjct 80614 CAAGATCA-TCAAGTC-AAAG-ACAGGAAAGGATGTAAAGTCTGACAA---GAGAGCCCT 80667 Query 196066 TCGTCGGCTTAGGACTGCATGTGAACGTGCCAAA-CGAACTCTCTCTTCTACGGCTCAAA 196124 || |||||||| | | || | | |||| || |||| ||||| | | ||| Sbjct 80668 TCAGAAGCTTAGGAGAG-AGGTCGAGAAGTCAAAGAGAGCTCTTTCTTCAGCTCCACAAG 80726 Query 196125 CAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTG 196184 | ||| |||||||| ||| | || | | || || ||| | ||| | | Sbjct 80727 TTAAGGTCGAGATTGAAGGTTTGATGGAGGATGTAGATTTGAGCGAAACCTTGACCAGAG 80786 Query 196185 CACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAG 196244 | || || ||||| || |||| ||||| || ||| ||| || || ||| || ||| Sbjct 80787 CTAAATTCGATGAGTTGAATGCTGACTTGTTCAGAAAGACTATCGAGCCAGTT-AAGAAG 80845 Query 196245 TACTTCG-TGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGA 196303 || | || || || | |||||| | || ||||| || || | || || || Sbjct 80846 GTTTTGGAGGATGCTGGAATCAAAAAGTCTGAAGTAGATGAGATCGTTTTGGTTGGTGGT 80905 Query 196304 TCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAG--CTTCTTCAATAATAAAGATT 196361 || || ||||| || ||||||||| || || || ||||| || || || Sbjct 80906 TCTACTCGTATCCCTAAGATTCAAGCCTTG--ATCAAGGAGTTCTTTGATGGAAAGGAGC 80963 Query 196362 TAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTA 196421 ||||| | || ||||| |||||||| || ||||||||||| ||||| || |||| || Sbjct 80964 CAAACAGAGGAATTAACCCAGATGAAGCCGTCGCTTATGGTGCTGCCGTACAAGCTGGTA 81023 Query 196422 TTCTCTCAGGTGTTGACAATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCG 196481 | | |||||| | | || | ||| | | || | |||||| | || Sbjct 81024 TCTTAGCAGGTGAAGGCGGTAGT---------GATTTATTATTATTGGATGTTACTCCTT 81074 Query 196482 TATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAA 196541 || | | ||| |||| || | ||||| |||||||| || | |||| ||| ||||| Sbjct 81075 TAACTTTAGGTATTGAGACTGTTGGTGGAGTTATGACAAAGCTCATTGGTAGAAACACTG 81134 Query 196542 CTATTCCGACTAAGAAGGAACAAGTCTTTTCA--ACGTATTCCGATAATCAACCAGGTGT 196599 | |||| || |||||| |||| |||||| || || |||||||| |||| ||| Sbjct 81135 TTGTTCCAACCAAGAAGAGCCAAG--TTTTCAGTACTTACCAAGATAATCAGCCAGCTGT 81192 Query 196600 TCATATTCAAGTATATGAAGGAGAACGCTCCCGTG-CAAAGGATAACCATCTACTTGGAA 196658 | ||| || || ||||| || || || ||| || | ||||||||| |||| ||||||| Sbjct 81193 ACTTATCCAGGTTTATGAGGGTGAGCG-TCCAATGACTAAGGATAACAATCTCCTTGGAA 81251 Query 196659 CTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCT 196718 ||||| | | || || ||| | || || ||||||||||| || ||| | ||| | Sbjct 81252 AATTCGAGCTTTCTGGAATCCCACCAGCTCCAAGAGGTGTTCCCCAAATTGAGGTTACTT 81311 Query 196719 TCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAAT 196778 | || || || | |||| ||| || | || | || |||| |||| | |||| |||| Sbjct 81312 TTGAAATTGATACTGATGGTATTTTACAAGTTAGTGCAAAGGATAAGGGTACTGGTAAAT 81371 Query 196779 CTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTA 196838 |||| |||||| || || ||||| ||||| | || || |||| || || || |||| Sbjct 81372 CTGAGAAGATTACTATCACAAATGATAAGGGTAGACTCTCACAGGAAGACATAGAGCGTA 81431 Query 196839 TGGTTCAAGATGCGGA 196854 || || | || || || Sbjct 81432 TGATTAAGGAGGCTGA 81447 >seq7 Length=822230 Score = 170 bits (188), Expect = 3e-37 Identities = 175/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 171861 TATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTC 171920 |||||| || ||||| || || | || ||||| |||||||| | || ||||| | || Sbjct 557430 TATGCAGATTTTTGTTAAGACTTTGACAGGAAAGACTATCACTTTGGAAGTTGAACCTTC 557489 Query 171921 AGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCA 171980 ||| ||||| || || | || || |||||||||||||||||||| || ||||| ||||| Sbjct 557490 AGATACAATTGAGAATGTTAAGGCAAAGATTCAAGATAAGGAAGGAATCCCACCTGATCA 557549 Query 171981 GCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAA 172040 ||||| | || ||||| || ||||| | || ||||| | || ||| |||||||||| Sbjct 557550 ACAACGTTTGATCTTTGCAGGAAAACAATTAGAGGATGGTAGAACTCTCTCTGATTACAA 557609 Query 172041 CGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 | ||||||| ||||| ||| ||||| | || || || ||| | |||||| Sbjct 557610 CATTCAAAAAGAGTCCACTTTACACTTAGTCCTGAGACTTAGAGGTGGT 557658 Score = 163 bits (180), Expect = 4e-35 Identities = 173/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 171861 TATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTC 171920 |||||| || ||||| || || | || ||||| |||||||| | || ||||| | || Sbjct 558331 TATGCAGATTTTTGTTAAGACTTTGACAGGAAAGACTATCACTTTGGAAGTTGAACCTTC 558390 Query 171921 AGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCA 171980 ||| ||||| || || | || || |||||||||||||||||||| || ||||| ||||| Sbjct 558391 AGATACAATTGAGAATGTTAAGGCAAAGATTCAAGATAAGGAAGGAATCCCACCTGATCA 558450 Query 171981 GCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAA 172040 ||||| | || ||||| || ||||| | || ||||| | || ||| |||||||||| Sbjct 558451 ACAACGTTTGATCTTTGCAGGAAAACAATTAGAGGATGGTAGAACTCTCTCTGATTACAA 558510 Query 172041 CGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | ||||||| ||||| ||| ||||| | || || || ||| | || || Sbjct 558511 CATTCAAAAAGAGTCCACTTTACACTTAGTCCTGAGACTTAGAGGCGG 558558 Score = 154 bits (170), Expect = 2e-32 Identities = 159/208 (76%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| || || || || || | || ||||| |||||||| | || |||||| Sbjct 557654 GTGGTATGCAGATTTTCGTTAAGACTTTGACAGGAAAGACTATCACTTTGGAAGTTGAGC 557713 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | ||||| ||||| || || | || || ||||||||||||||||| || || ||||| | Sbjct 557714 CTTCAGATACAATTGAGAATGTTAAGGCAAAGATTCAAGATAAGGAGGGAATCCCACCTG 557773 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 |||| ||||| | || ||||| || ||||| | || ||||| | || ||| |||| | Sbjct 557774 ATCAACAACGTTTAATCTTTGCAGGAAAACAATTAGAGGATGGTAGAACTCTCTCTGACT 557833 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACA 172064 ||||| ||||||| ||||||||| |||| Sbjct 557834 ACAACATTCAAAAAGAGTCTACTTTACA 557861 >seq2 Length=1258884 Score = 111 bits (122), Expect = 2e-19 Identities = 1145/1828 (63%), Gaps = 46/1828 (3%) Strand=Plus/Plus Query 77870 GACTTTGAATTTGGGTATTTTGGATTGAAGACTCTCGAAAAAAGTTACCTGCAGTACATG 77929 || ||||||| | ||||||| || || ||||| |||| | || || | | || Sbjct 369453 GATTTTGAATACGATTATTTTGCCTTCAAAACTCTAGAAAGATCCTATCTTCTTAAAATT 369512 Query 77930 GATGGAAAGCTCATGGAGACACCTCAATACTTATTCATGCGTGTTTCTATTGGTATTCAT 77989 || || | |||| | ||| ||| | | | ||||| || ||| |||||||||| Sbjct 369513 GACAACAAAGTTGTGGAAAGACCACAACATCTTCTGATGCGGGTCTCTTGTGGTATTCAT 369572 Query 77990 GGAAATGATATTCCAGCGGTACTTGAAACGTATGATAAAATGTC-CAATGGTATGTTTAT 78048 | ||||||| ||| | ||||||||| ||||| | || ||| ||| |||| Sbjct 369573 TGTGGTGATATTGAAGCTGCACTTGAAACATATGAGTTGTTATCGCAAAAATAT-TTTAC 369631 Query 78049 TCACGCAACACCTACTTTGTTTAATGCAGGTACTCCCCGTCCACAGATGTCATCTTGTTT 78108 ||| |||||||| || | |||||| |||| ||||| || || || |||||||||||||| Sbjct 369632 TCATGCAACACCCACACTCTTTAATTCAGGCACTCCACGACCTCAAATGTCATCTTGTTT 369691 Query 78109 CCTACTTGCAAATAAGGAGGACTCTATTAATGGTATATACGGGACTCTCACAGAGTGTGC 78168 |||| | | || || || || || ||||| | | || || || | || || Sbjct 369692 TTTACTCAGGATTCCAGAAGATTCAATAAACGGTATCTTTGACACACTAACTAAATGCGC 369751 Query 78169 TCAGATTTCTAAGTGGGCTGGTGGTATAGGTCTTCATATTCACGATGTTCGTGCAAACAA 78228 | ||| |||| || |||||| | || | | || || | | ||| Sbjct 369752 AAACATTAGTAAGACTGCGGGTGGTCTTGGGGTGGCAGTGAGTAATATTAGAG-GAACTG 369810 Query 78229 GTCCA-GGATTAGAGGAACTAATGGTCAGTCTGATGGAATTATTCCTATGCTTAGGGTAT 78287 || || ||| ||||||| ||||| ||| ||||| | ||||| ||||| | || | Sbjct 369811 GTTCATATATTCGAGGAACAAATGGGAGATCTAATGGATTAATTCCGATGCTGCGCGTTT 369870 Query 78288 TCAATGCTACAGCACGCTATGTCAACCAAGCGGGTCGTAGG----AAGGGGTCATTCGCT 78343 |||| || || | ||| | | |||| || | | | |||| | |||| || Sbjct 369871 ATAATGACACTGCTAGGTATATTGATCAAGGTGGAGGGAAGCGTAAAGGTGCCATT-GCA 369929 Query 78344 ATGTACCTTGAACCTTGGCACGCCGATGTAATGGATTTTTTGGAACTTCGTCTCAACCAG 78403 || || | || || ||||||| ||||| | || ||| | ||| | | || || Sbjct 369930 ATTTATTTGGAGCCGTGGCACGTTGATGTTGTAGAGTTTATTGAAATCAGGAAGAATCAC 369989 Query 78404 GGTGACGAGGAAGCTCGATGCAGGGATTTATTCACTGCTATGTGGATTCCGGATCTTTTT 78463 || | || || |||| | ||| | || |||| | ||| |||| ||||| || Sbjct 369990 GGAAAGGAAGAGATGAGATGTCGCGATCTCTTTCCTGCCCTTTGGGTTCCTGATCTGTTC 370049 Query 78464 ATGAAGAGAGTTGAGGAAGGAGGTA-AATGGTCTCTTTTCTGTCCAGATAAGACTAAGGG 78522 ||| | |||||||| |||||| | | ||| |||| | || |||||| | | |||| Sbjct 370050 ATGGAAAGAGTTGA-GAAGGATCAAGATTGGACTCTAATGTGCCCAGATGA-ATGCAGGG 370107 Query 78523 TCTTTC-AGATGTATACGGGGAAGAATTCGAAAAATTGTACACTAAATACGAAGAGGAAG 78581 || | |||||| | || || || || | || | || | || || | ||| Sbjct 370108 GATTGCAAGATGTTTGGGGCGATGATTTTAAGAAGCTATATGAAGAGTATGAGAAACAAG 370167 Query 78582 GTCTCGCTATTAAGACAATTGATGCATCTGAACTATGGAAAGCTATTATCAAAAG-TCAA 78640 | | | | || || || | || |||| ||| || | | | | | |||| Sbjct 370168 GCCGTGGAAGGAAAACGATGAAAGCGCAGAAACTTTGG-TTCTTAATCTTACAGGCTCAA 370226 Query 78641 ACAGAGACCGGCACCCCGTATATGCTATACAAAGACAGCTG-TAACAGAAAGTCTAACCA 78699 | ||||| || || || | ||| || ||||| |||| || || || |||||| Sbjct 370227 ATTGAGACGGGGACACCATTTATTTGTTATAAAGA-TGCTGCAAATAGCAAAAGTAACCA 370285 Query 78700 AAAGAACCTAGG---TGTCATCAAAAGCTCTAACCTTTGCACAGAAATTCTGGAATACAC 78756 || || | || | | | ||| |||| | ||||||||||| | |||||||| Sbjct 370286 GAAAAATTTGGGAACTATTGTTTCAAG---TAACTTATGCACAGAAATCATAGAATACAC 370342 Query 78757 GGATAAGAATGAAACAGCTGTATGTAATCTAGGGTCTATCGCTCTACCAAAGTTTGTTGA 78816 | | | ||| || || |||||||| | |||||| | || ||||| || ||||| Sbjct 370343 TAGCACGGACGAAGTTGCCGTCTGTAATCTGGCGTCTATTGGCCTTCCAAAATTCGTTGA 370402 Query 78817 TCGAGAATTA-AAGACATTTGATTATTCAAAGCTCCACGAAATTACAAAAATCGTAACTA 78875 | | ||| | ||||| ||||||| | ||| | | ||| |||| || | | || | Sbjct 370403 T-AAAAATAACAAGACGTTTGATTTTGATAAGTTAAAAGAAGTTACGAAGGTGATTACGA 370461 Query 78876 AAAATTTAAATCGTGTAATTGACCGTAACTACTACCCAGTC-GAGACTGCTAAATATTCT 78934 ||||| ||| | |||||| | || || | || ||| || |||| | || Sbjct 370462 GGAATTTGAATAAATTGATTGACGTTGGATATTATTCTCTCAAAGAGTG-TAAAAAATCG 370520 Query 78935 AATATGAAACATAGACCAATTGGTCTAGGTGTTCAAGGATTGGCAGA-TGTATTCAACTT 78993 ||| | | |||| | ||| | || | || ||||||| | ||||| ||| || | | Sbjct 370521 AATTTAAGACATCGTCCATTGGGGATTGGCATTCAAGGGCTCGCAGACTGT-TTTATGAT 370579 Query 78994 GTGTGGTCTTCCCTTCGATTGCGAAGATTCAAGGACTATGAATGCTCATATTTTCGAGAC 79053 | | || | || | ||| | || | | | || | ||| || ||||| || Sbjct 370580 GCTTCGTATGCCGTACGAGTCTGAGGGAGCTAAGAAGTTAAATAAACAAATTTTTGAAGT 370639 Query 79054 TATTTATCATGCAGCTTTAGAAGCAAGTTCAGAACTTGCTGAAATTAATGGGCCTTATGA 79113 ||| ||| |||||||| | || || || | || ||||| |||| | ||||| || || Sbjct 370640 TATCTATTATGCAGCTCTCGACGCTAGCTGTGAGCTTGCAGAAAAATACGGGCCATACGA 370699 Query 79114 GAGTTTCGAGGGTTCACCCGCTTCACAAGGTCTTCTTCAACCAGATCTATGGGAAGGTGA 79173 | | ||||| || || | ||| || | ||| ||| | |||| || | Sbjct 370700 AACATATTCCGGTTCGCCTGCGAGTAAGGGTATTTTACAATTTGATATGTGGGGAGTTAC 370759 Query 79174 AGCTAAATACAGTGGTCGTTACGATTGGGA--TGCAATGAGAAAGCGTGTAATGACGAAG 79231 | | | || ||| | || |||||||| ||| ||| || | | || | Sbjct 370760 ACC---AGACTCTGGACTTTGTGATTGGGATTTGCTTAAAGATAGGATTTCCAAAC--AT 370814 Query 79232 GGTCTGAGAAACAGTCTTCTCGTAGCACCAATGCCCACTGCTTCGACGGCTCAGATCCTC 79291 ||| | | || ||| | || | |||||||| || || || || | || || | Sbjct 370815 GGTATTCGTAATTCTCTATTAATATCTCCAATGCCAACAGCATCCACTTCGCAAATTTTA 370874 Query 79292 GGTAATAATGAGTGTTTTGAACCATACACTACAAACATATATCTTCGTCGCACATTAGCT 79351 ||||| |||||| ||||||| |||| || | ||||| |||| |||| | | || || Sbjct 370875 GGTAACAATGAGAGTTTTGAGCCATTTACCTCGAACATTTATCATCGTAGAGTACTATCT 370934 Query 79352 GGTGAATTTGTTGTGGTTAACAAACATCTTGTTGAA-GATTT-GAAGAAGTTAGGTCTTT 79409 ||||| || |||| || || ||| ||| | || ||||| ||| || ||| | Sbjct 370935 GGTGAGTTCTTTGTAGTAAATCCGCAT-TTGCTAAATGATTTACTAGAGCTTGGGTTATG 370993 Query 79410 GGTCAAAAGAGATGAA--AGACT-TAATGGTCAAAGCCGGAGGGAGTGTGCAAAACATAG 79466 || | || | | || ||| | | || | |||| || ||| | ||||| ||| Sbjct 370994 GGATGATAG-GCTTAAGCAGAATATTATTG-CAAA--TAATGGCAGTATTCAAAATATAC 371049 Query 79467 TAGAGATACCAGATAATATTAAAAATCTTTATAAGACTGTTTGGGAAATTAGCCAAAAAT 79526 | || || || |||| | |||||||||||||| |||||||||| ||||| Sbjct 371050 TTACAATTCCGGAAGATATACGCGAGCTTTATAAGACTGTATGGGAAATTAAGCAAAAGA 371109 Query 79527 GTATTATCGACATGGCAGCGGACAGGGGTCGTTTTATCTGTCAATCACAATCTATGAATT 79586 | || || ||||| || || ||||||| | | | |||||||| |||||| |||| Sbjct 371110 CAGTAATTGATATGGCTGCAGATAGGGGTCCATATGTTTGTCAATCGCAATCTTTGAACA 371169 Query 79587 TGTTTTTAGAGTCACCTACAATTGGAAAAATATCCTCTATGCACATGTATGCGTGGAAGT 79646 | | | || ||| ||| ||| |||| |||||||| | |||| ||||| Sbjct 371170 TTCATATGGAAAATGCTAACTTTGCAAAGTTATCATCTATGCATTTTTATGGTTGGAAAA 371229 Query 79647 CTGGACTCAAGACAGGTATGTACTACTT 79674 || || || ||||| || || || || Sbjct 371230 AAGGTCTAAAAACAGGCATTTATTATTT 371257 >seq4 Length=1009175 Score = 102 bits (112), Expect = 1e-16 Identities = 200/296 (68%), Gaps = 0/296 (0%) Strand=Plus/Minus Query 196454 GATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTT 196513 |||||| || |||| || ||| ||||| |||| | ||| ||||||| |||||| ||| Sbjct 765755 GATCTTTTGTTACTCGACGTTACACCCTTATCTTTAGGTATTGAAACTTTGGGTGGAGTT 765696 Query 196514 ATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCA 196573 | ||| | | ||| | || || || || || || ||||| ||| ||||| || || Sbjct 765695 TTTACTCGATTAATTAACAGAAATACCACAATACCTACTAAAAAGAGCCAAGTATTCTCC 765636 Query 196574 ACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGT 196633 || | | || |||||| | ||| ||| |||| | |||||||| | | Sbjct 765635 ACTGCTGCAGACAATCAAACTCAAGTTGGAATTAAAGTTTTCCAAGGAGAAAGAGAATTT 765576 Query 196634 GCAAAGGATAACCATCTACTTGGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGA 196693 || ||||| | | |||||| || || ||| ||| ||||| | ||||||||| Sbjct 765575 GCTGCTGATAATAAGTTGCTTGGACAATTTGAAATGATGGGAATTCCTCCAGCACCCAGA 765516 Query 196694 GGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAATGGAATTCTAAACGT 196749 || || || || ||| | || ||| ||||| || |||||||||||| | || || Sbjct 765515 GGGGTACCTCAAATTGAAGTCACCTTTGATATTGATGCAAATGGAATTATGAATGT 765460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657862251980960