Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20parvum_20[genbank_20GCA_5F001306235.1_202015-10- 01] 18 sequences; 9,112,937 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq2 109 6e-19 >seq2 Length=1198512 Score = 109 bits (120), Expect = 6e-19 Identities = 271/399 (68%), Gaps = 22/399 (6%) Strand=Plus/Plus Query 16674 TTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCT 16733 |||| || || | ||| | |||||||| ||||||||||| || | || || ||| | Sbjct 61645 TTTGATATTCACCAACTCTCTTTTCGAAGAAGTTAGTTTTACCTTGAAGTGAAATAAGGT 61704 Query 16734 CCATGAAATCAAAAGGATTAGTA--GCTGAAAATATTTTAGAGTACCCCAGTTCGGCGAT 16791 |||| ||||||||||||||| | | || | || |||| || || || || | | Sbjct 61705 CCATCCAATCAAAAGGATTAGAAACGTTGTAGAT-TTTTGGAATATCCAAG-GCAAAAAG 61762 Query 16792 TAATCTATCCGCTACAAATTCTATATATTGGCACATTAAT-TCGCAGTTCATTCCTATAA 16850 ||||||||| || |||||||| ||||||||| ||| | | ||| | ||||| || |||| Sbjct 61763 TAATCTATCAGCAACAAATTCAATATATTGGGCCATAAGTCTCG-AATTCATACCAATAA 61821 Query 16851 GACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGC--TCTATAACAACCGCTTCCTTAAT 16908 || || ||||||| || |||| | ||| | || | |||| ||||| | || Sbjct 61822 GATCAACAGGAAGAGAGTC--ACAAAGAAAGTTTCTTTCAACTTCAACAGCTTC--TGAT 61877 Query 16909 AATACTAGCAACTCGTTC-CTCGGA-CGG----TGTATGTTTAAGATGTTTAAACATCAG 16962 | | | | | || | || ||| | | | || |||||| |||| | || | Sbjct 61878 ATGATTTG----TTGTACTCTAGGAGCTGGTAATTTAAATTTAAGGGCTTTATATATTAA 61933 Query 16963 ACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAA 17022 ||| || ||||| ||| | || || || | || |||||||| ||||||||||| | Sbjct 61934 ACAAGCAAAATCAGCATGGAGACCTTCATCACGACTAATAAGTTCATTAGAAAATGTGAG 61993 Query 17023 CCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGC 17061 || ||||| ||| ||||| || | |||||| || || Sbjct 61994 TCCAGGCATAAGTCCACGTTTTTTAAGCCAAAAAATTGC 62032 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517545483552240