Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20parvum_20[genbank_20GCA_5F001306235.1_202015-10- 01] 18 sequences; 9,112,937 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq7 86.0 6e-12 >seq7 Length=873514 Score = 86.0 bits (94), Expect = 6e-12 Identities = 149/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 138402 CAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTC 138461 ||| |||||||||| | ||||| ||||||||||||||||| | ||| | || Sbjct 550065 CAATACTAAATGTAAAGTAGACTCTTTTTGAATGTTGTAGTCAGAGAGAGTTCTACCATC 550006 Query 138462 CTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTC 138521 ||| | |||||| || | | |||||| ||| ||||| || || || || || || || || Sbjct 550005 CTCTAATTGTTTTCCTGCAAAGATTAAACGTTGTTGATCAGGTGGGATTCCCTCCTTATC 549946 Query 138522 GGTGATTTTTTGTTTTAA-TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCG 138580 ||| | |||| |||| | || | || || | | ||| || || | || | | Sbjct 549945 -TTGAATCTTTGCCTTAACATTCTCAATTGTATCTGAAGGCTCAACTTCCAAAGTGATAG 549887 Query 138581 TTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 | || || |||| ||| || |||||||||||||| Sbjct 549886 TCTTTCCTGTCAAAGTCTTAACAAAAATCTGCAT 549853 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496262288340960