Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20parvum_20[genbank_20GCA_5F001306235.1_202015-10- 01] 18 sequences; 9,112,937 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq7 127 2e-24 >seq7 Length=873514 Score = 127 bits (140), Expect = 2e-24 Identities = 172/240 (72%), Gaps = 0/240 (0%) Strand=Plus/Plus Query 27393 AAATATTACTATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGA 27452 ||| | ||| | ||||| || ||||| ||||| | || || |||||||| ||| | || Sbjct 549840 AAAGAATACAAATATGCAGATTTTTGTTAAGACTTTGACAGGAAAGACTATCACTTTGGA 549899 Query 27453 GGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAAT 27512 |||||| | |||| |||| ||| | ||||| || ||||| || ||||||||||| Sbjct 549900 AGTTGAGCCTTCAGATACAATTGAGAATGTTAAGGCAAAGATTCAAGATAAGGAGGGAAT 549959 Query 27513 TCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT 27572 || || || || || ||| |||| ||||| || || ||| | ||||||| | | || || Sbjct 549960 CCCACCTGATCAACAACGTTTAATCTTTGCAGGAAAACAATTAGAGGATGGTAGAACTCT 550019 Query 27573 AGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | ||||| || | ||||| || || ||| | ||| |||| ||| | || | ||||| Sbjct 550020 CTCTGACTACAACATTCAAAAAGAGTCTACTTTACATTTAGTATTGAGACTCAGAGGTGG 550079 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570310271680160