Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20parvum_20[genbank_20GCA_5F001306245.1_202015-10- 01] 18 sequences; 9,221,024 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq7 86.0 5e-12 >seq7 Length=872730 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| ||||| || || || | || ||||| || || || | ||| ||| | Sbjct 577864 ATGCAGATTTTCGTTAAGACTTTGACAGGAAAGACTATCACTTTGGAAGTTGAGCCTTCA 577923 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 || || ||| | || || ||| ||| ||||| || || |||| |||||| Sbjct 577924 GATACAATTGAGAATGTTAAGGCAAAGATTCAAGATAAGGAGGGAATCCCACCTGATCAA 577983 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 ||| | | || | ||| || ||||||||||| |||| | ||| | | || || ||| Sbjct 577984 CAACGTTTAATCTTTGCAGGAAAACAATTAGAGGATGGTAGAACTCTCTCTGACTACAAC 578043 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 |||||||||||||||||| ||||| | || |||||| | |||| || Sbjct 578044 ATTCAAAAAGAGTCTACTTTACATTTAGTATTGAGACTCAGAGGTGG 578090 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 115282 AAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTC 115341 ||| ||||| |||||||| || || | || ||||| || || || | ||| || | Sbjct 577632 AAATATGCAGATTTTTGTTAAGACTTTGACAGGAAAGACTATCACTTTGGAAGTTGAACC 577691 Query 115342 CAGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401 || || ||| | || || ||| ||| ||||| ||||| |||| ||| Sbjct 577692 TTCAGATACAATTGAGAATGTTAAGGCAAAGATTCAAGATAAGGAAGGAATCCCACCTGA 577751 Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTA 115461 ||| ||| | | || | ||| || ||||||||||| |||| | ||| | | ||||| Sbjct 577752 TCAACAACGTTTGATCTTTGCAGGAAAACAATTAGAGGATGGTAGAACTCTCTCTGATTA 577811 Query 115462 TAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||||||||||||||| ||| |||| | || ||||| | |||| || Sbjct 577812 CAACATTCAAAAAGAGTCCACTTTACACTTAGTCCTGAGACTTAGAGGTGG 577862 Score = 84.2 bits (92), Expect = 2e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 115379 GATAAAGAAGGCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAA 115438 ||||| ||||| |||| |||||| ||| | | || | ||| || ||||||||||| Sbjct 578486 GATAAGGAAGGAATCCCACCTGATCAACAACGTTTGATCTTTGCAGGAAAACAATTAGAG 578545 Query 115439 GATGACAAAACCATGGCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498 |||| | ||| | | ||||| ||||||||||||||||| ||| |||| | || || Sbjct 578546 GATGGTAGAACTCTCTCTGATTACAACATTCAAAAAGAGTCCACTTTACACTTAGTCCTG 578605 Query 115499 AGATTGCGAGGAGGAA 115514 ||| | |||| |||| Sbjct 578606 AGACTTAGAGGCGGAA 578621 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425343906690160