Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20parvum_20[genbank_20GCA_5F001306245.1_202015-10- 01] 18 sequences; 9,221,024 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq13 416 4e-111 seq1 235 7e-57 seq2 223 4e-53 seq9 165 1e-35 seq4 107 2e-18 seq6 91.5 2e-13 >seq13 Length=98922 Score = 416 bits (460), Expect = 4e-111 Identities = 1103/1667 (66%), Gaps = 36/1667 (2%) Strand=Plus/Minus Query 6503 GTTCCTTTCATTTGATAACAGTAGTTTTCGAGACCATTCTTCGCCTCGACCTTTTTCGCG 6562 |||||| ||| | ||| |||||| || | | ||||| ||||| | ||| | Sbjct 4269 GTTCCT--CATGTTATAGAGGTAGTTCTCCAAAGAGTTCTTAGCCTCAATCTTAAGTCTG 4212 Query 6563 TACTTTTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCT 6622 | || ||||| ||| | || || || || ||||| | ||||| |||||| || || Sbjct 4211 TTCTGCTCATCCTCACCCTTGTATTTCTCAGCATCATTAACCATACGTTCAATATCGTCC 4152 Query 6623 TTCGATAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTA 6682 || |||||||| |||||||| || ||||| || ||||| | ||||| | |||| Sbjct 4151 TTTGATAATCTACCCTTATCGTTAGTAATAGTGATCTTGCTGCTCTTACCAGTACTCTTA 4092 Query 6683 TCTTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGT 6742 || ||||| |||||||| |||||||| ||||||| ||| || | || | ||||||| Sbjct 4091 TCAACAGCAGACACATTCAAGATACCATTAGCATCAATATCAAAGGTGACTTCAATTTGT 4032 Query 6743 GGTGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTA 6802 ||| ||| || ||||| | ||||||||| | || || | || || | | |||| Sbjct 4031 GGTACACCTCTTGGTGCTGGTGGAATACCATCAAGATGGAACTTTCCGAGGAGATGGTTA 3972 Query 6803 TCCGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCT 6862 ||| | | | | | ||||| ||||| |||| || || || || ||||| Sbjct 3971 TCCTTAGTCATGGCTCTCTCACCCTCATAAACTTGGATCAAGACACCACTCTGGTTATCA 3912 Query 6863 TGTGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACC 6922 || | ||||| |||| ||||| | ||| || || ||||| | ||||| | Sbjct 3911 GCATAAGTAGTGAAGACTTGTGTCTTCTTTGCTGGGATAGTTGTATTACGTTCAATAAGC 3852 Query 6923 GGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGT 6982 |||||||| |||||| |||||| | || || || | || | || ||||| | | Sbjct 3851 TTGGTCATAACACCACCAGCAGTTTCTAAACCGAGTGATAATGGAGCAACATCCAATAAT 3792 Query 6983 AACAGGTCTTGAACAG-ATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGC 7041 || || || || || | | | | || |||| ||||||| || ||||| || | || Sbjct 3791 AAGAGATCCTGTACGGCAGAGGATTGCT-CACCATTTAAGATAGCAGCTTGTACAGCAGC 3733 Query 7042 CCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATA 7101 || || || || || || || || || || | ||| | |||||||||||||| | Sbjct 3732 ACCATAAGCAACAGCTTCGTCTGGATTGATTGCTTTGCATGGCTCTTTACCGTTAAAGAA 3673 Query 7102 ATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTC 7161 ||| | || |||| || || || ||||| || ||||| ||||| || | || Sbjct 3672 TTCCTGAATCAAGGCCTGAACCTTTGGAATACGTGTAGAACCACCAACCAATACAACATC 3613 Query 7162 ATTCACTTTCGAT---TTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCAT 7218 || || ||| || || || | || ||| ||| || || || | | Sbjct 3612 ATGTACA---GATCTCTTGTCCATACCAGCATCCTTGAGTACTTTCTCAACTGGAGCTAA 3556 Query 7219 ACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGA---TGT 7275 | | |||||| | || || ||||| || || | || | | |||| || Sbjct 3555 AGTTGCACGGAAGTAATCAGCGCAGAGTTCTTCGAATCTAGCTCTACTGATGGCAACTGA 3496 Query 7276 ATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGA 7335 ||| ||||| || || || | ||||| | ||||| || | ||| | | || || Sbjct 3495 ATA---ATCAATACCTTCATAGAGTGAATCTAACTCAATTGTAGCTTGAGTAGAAGATGA 3439 Query 7336 TAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACC 7395 || |||| |||||| ||||| || |||| | | | | || | | || Sbjct 3438 CAAAGTTCTCTTTGCACGCTCGCATTGAGTTCTGAGTCTTCTTAAAGCTCTAGCATTTGT 3379 Query 7396 GGAAATATCTTT--CT-TATGTTTACGTTTAAACTCTT---CAGAGAAGTGTCGAAGGAG 7449 || | ||| | || ||| || | || || |||| || |||| | | | ||| Sbjct 3378 GGTTAAATCCATACCTCTATTCTTTCTCTTGAAATCTTGTACACAGAATTCT---ACGAG 3322 Query 7450 TCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAA 7509 ||| ||| |||||||||||||||||||| ||||| || ||||| ||||| |||||||| Sbjct 3321 TCTGTTATCAAAATCTTCACCACCCAAGTGAGTATCACCAGCGGTAGCTTTAACTTCAAA 3262 Query 7510 GATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAAT 7569 ||||| ||||||| |||| || || |||||||| ||||||||||| | || || || Sbjct 3261 AATACCATCTTCAATAGTTAATAATGATACATCAAAAGTACCACCACCTAAATCGAAGAT 3202 Query 7570 GAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGT 7629 | ||| || | ||| | | |||||||| ||||| || || ||||| || || || Sbjct 3201 CAATACATTTCTCTCGCCAGTTCCTTTCTTATCAAGACCATAAGCAATAGCAGCTGCAGT 3142 Query 7630 TGGTTCATTAATAATAC-GAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCG 7688 ||| || ||||| || | | ||| |||| |||||||| | | ||||| || || | Sbjct 3141 TGGCTCGTTAATGATTCTCATTACA-TTCAAACCAGCAATTGCACCTGCATCCTTTGTTG 3083 Query 7689 CTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCT 7748 |||| || || || || || || || || || || || || || |||| | | | || Sbjct 3082 CTTGACGCTGTGAGTCATTGAAATAAGCTGGAACAGTAACTACAGCGTTCTTAATTTGGC 3023 Query 7749 TACCGAGATACGATTCCGCGATATCTTTCAT-TTTGGTAAGAACCATCGATGAAATCTCT 7807 ||| | || | ||| | ||| || ||||| ||| |||| |||||| | ||||| ||| Sbjct 3022 GACCCAAGTATGCTTCAGAGATCTCCTTCATCTTTTGTAA-AACCATAGCAGAAATTTCT 2964 Query 7808 TCAGCCGCAAACTGTTTCGTTTCACCGTTAA--AATCAACTTCAATCATGGGTTTATCCG 7865 ||||| || | ||| ||||||| ||| | | || || || || || ||| Sbjct 2963 TCAGCATGGAATTCCTTCTTTTCACC--TAAGTAGTTTACACTGATGATTGGCTTGTCCT 2906 Query 7866 CAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCG 7925 | ||| | || ||| | | ||| | ||||||| ||| || || || Sbjct 2905 TTGGACCTCTAACTACTTTAAATGGCCAGTGAGTCATATCACTTTGTACTGCCTGATCAT 2846 Query 7926 AAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTG 7985 ||||||||| || |||||||| || |||||||||||||| |||| ||||| | || Sbjct 2845 CAAACTTTCTACCAATAAGACGTTTAGCATCAAAAACTGTATTTTCTGGGTTTCTAGCAA 2786 Query 7986 TTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACG 8045 ||||||||| || || || || |||||||| || | |||| ||||| || || || | Sbjct 2785 CTTGGTTCTTTGCTGCATCACCAATAAGACGCTC---AGTTTCTGTAAATGCTACATATG 2729 Query 8046 ATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGA 8105 |||| || || || || ||||| ||||| | || ||| ||||| |||||| ||| | Sbjct 2728 ATGGTGTTGTACGGTTACCTTGATCGTTTGGAACAATATCTACAGTATCGTTTCTCCATA 2669 Query 8106 CGCCGACGCACGAATACGTTGTTCCTAAATCAATACCGATTGCTTGA 8152 | || || || || || || || |||||||||||||| || ||| || Sbjct 2668 CACCAACACATGAGTATGTGGTACCTAAATCAATACCAATAGCTGGA 2622 >seq1 Length=1295191 Score = 235 bits (260), Expect = 7e-57 Identities = 802/1241 (65%), Gaps = 23/1241 (2%) Strand=Plus/Minus Query 6611 TCAATGTCTTCTTTCGATAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTA 6670 || |||||||| | || | ||| ||||||||||| || || |||||||| || |||||| Sbjct 81490 TCTATGTCTTCCTGTGAGAGTCTACCCTTATCATTTGTGATAGTAATCTTCTCAGATTTA 81431 Query 6671 CCCGAGGCCTTATCTTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTT 6730 || | ||||||| | ||||| || | |||||||||| | ||||| || || | Sbjct 81430 CCAGTACCCTTATCCTTTGCACTAACTTGTAAAATACCATCAGTATCAATTTCAAAAGTA 81371 Query 6731 ACATTAATTTGTGGTGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCA 6790 || | |||||| || ||| || || || | ||| || || | | || ||| | ||| Sbjct 81370 ACCTCAATTTGGGGAACACCTCTTGGAGCTGGTGGGATTCCAGAAAGCTCGAATTTTCCA 81311 Query 6791 AGTAAACTGTTATCCGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCA 6850 || | | |||||||| | | | | ||| ||||| ||||| || | || || || Sbjct 81310 AGGAGATTGTTATCCTTAGTCATTGGACGCTCACCCTCATAAACCTGGATAAGTACAGCT 81251 Query 6851 GGTTGATTATCTTGTGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTT 6910 || ||||||||||| || ||| | ||| ||||| | ||||| || ||| Sbjct 81250 GGCTGATTATCTTGGTAAGTACTGAAAACTTGGCTCTTCTTGGTTGGAACAACAGTGTTT 81191 Query 6911 CTCGGAATAACCGGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTC 6970 || ||| | | ||||||| ||||| | ||| || | || | || | ||| || Sbjct 81190 CTACCAATGAGCTTTGTCATAACTCCACCAACAGTCTCAATACCTAAAGTTAAAGGAGTA 81131 Query 6971 ACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCT 7030 || ||||| | ||| | || | | |||||||| | |||||| | ||| Sbjct 81130 ACATCCAATAATAATAAATCACTACCG---------CCTTCACCTGCTAAGATACCAGCT 81080 Query 7031 TGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTA 7090 || || | || || || ||||| || ||||| |||||||| | | || | || || Sbjct 81079 TGTACGGCAGCACCATAAGCGACGGCTTCATCTGGGTTAATTCCTCTGTTTGGCTCCTTT 81020 Query 7091 CCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACC 7150 || | ||| | ||| | || |||||| || ||||| || || || ||||| ||| Sbjct 81019 CCATCAAAGAACTCCTTGATCAAGGCTTGAATCTTAGGGATACGAGTAGAACCACCAACC 80960 Query 7151 AAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTC-TCGAAGTGTTTTTTCGAC 7209 |||||||| |||| |||| || || | ||| | || || || || || || Sbjct 80959 AAAACGATCTCATCTACTTCAGACTTTTTGATTCCAGCATCCTCCAAAACCTTCTTA-AC 80901 Query 7210 AGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAAT 7269 || || ||| || | ||||||||| | || || || || || | ||| | Sbjct 80900 TGGCTCGATAGTCTTTCTGAACAAGTCAGCATTCAACTCATCGAATTTAGCTCTGGTCAA 80841 Query 7270 GGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGT 7329 || | ||||| || | || || ||||| || | | ||||| | Sbjct 80840 GGTTTCGCTCAAATCTACATCCTCCATCAAACCTTCAATCTCGACCTTAACTTGTGGAGC 80781 Query 7330 CGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGAC-GAAGGGCACGCG 7388 ||||| | | || ||||| ||| || | || ||| | | ||||||| | | Sbjct 80780 TGAAGAAAGAGCTCTCTTTGACTTCTCG-ACCTCTCTCCTAAGCTTCTGAAGGGCTCTCT 80722 Query 7389 GGTTACCGGAAATATC-TTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGG 7447 || | | ||| |||| | | ||| || | |||| | | ||||| | Sbjct 80721 TGTCAGACTTTACATCCTTTCCTGTCTTTGACTTGATGATCTTGATA-AAGTGGTCCATA 80663 Query 7448 AGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCA 7507 | |||| ||||||||| ||||| ||||| || ||||| || || || ||| || Sbjct 80662 ACTCTCTGATCGAAATCCTCACCTCCCAAATGGGTATCACCACTTGTAGCAACGACCTCG 80603 Query 7508 AAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAA 7567 || | ||| |||||| | || | ||||||||||| ||||||||||||| || | Sbjct 80602 AAAACACCGTTATCAATGGTCAAGAGAGAAACATCAAAAGTACCACCACCCAAATCGTAT 80543 Query 7568 ATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCC 7627 | | | | || | || | | |||| || | ||| | || || || || || Sbjct 80542 ACTAAAATGCTCTTCTCAGCCT------TCTTGTCCAAACCAAAAGCAATTGCTGCTGCT 80489 Query 7628 GTTGGTTCATTAATAATACGAAG-ACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGT 7686 ||||| |||||||||||||||| ||| |||| || ||||||| | ||||| || || Sbjct 80488 GTTGGCTCATTAATAATACGAATTACA-TTCAAACCGGCAATAGCACCAGCATCCTTGGT 80430 Query 7687 CGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTT 7746 || || || || | ||| |||||||| || ||||| || | || || | | | |||| Sbjct 80429 AGCCTGACGCTGAGCATCATTAAAGTAAGCTGGGACAGTAATAACTGCATGCTTTACTTC 80370 Query 7747 CTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTC 7806 |||||||||||| | || || || || ||||| ||| | ||||| | ||||| ||| Sbjct 80369 CTTACCGAGATAAGCCTCAGCAATTTCCTTCATCTTGACCAAGACCATAGCTGAAACCTC 80310 Query 7807 TTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTT 7847 ||| | || || || ||| | ||||| |||| | ||||| Sbjct 80309 TTCTGGGGCTAATTGCTTCTTCTCACCCTTAACAGAAACTT 80269 >seq2 Length=1238148 Score = 223 bits (246), Expect = 4e-53 Identities = 1153/1822 (63%), Gaps = 43/1822 (2%) Strand=Plus/Minus Query 104368 TAATACATACCCGTTTTTAAACCAGTTTTCCACGCGTACATGTGCATAGACGAAAGTTTT 104427 ||||| || || ||||||| ||| ||||||| | || | |||||||| || | ||| Sbjct 381701 TAATAAATGCCTGTTTTTAGACCTTTTTTCCAACCATAAAAATGCATAGATGATAACTTT 381642 Query 104428 GAAATTGTTGGACTCTCGAC--GAATAAGTTCATACTTTGACTTTGGTCTATATACACAC 104485 | || | | | | || | |||| ||||| | ||| ||| | ||| || Sbjct 381641 GCAAAGTTAGCATTTTCCATATGAAT--GTTCAAAGATTGCGATTGACAAACATATGGAC 381584 Query 104486 CTCTATCCGCCGCCATATCGATGATTGTTTTTTGACTCATTTCCCATACGGTTTTATACA 104545 | ||||| || |||||||| || | ||| ||||| | ||||||||||| || ||||| | Sbjct 381583 CCCTATCTGCAGCCATATCAATTACTGTCTTTTGCTTAATTTCCCATACAGTCTTATAAA 381524 Query 104546 ATTCCTTAAGATCATCGGGTATATCAATAATGTTTTGAACAGACCCATTTGCCTTCACCA 104605 || | ||| || || || || || ||||||| | ||||| || | | Sbjct 381523 GCTCGCGTATATCTTCCGGAATTGTAAGTATATTTTGAATACTGCCATTA---TTTGCAA 381467 Query 104606 TAAGATCTTTCATTT-CCTTCGA--CCAGAGTCCACGTTCTTTCAAATCGTTTACTAAAT 104662 ||| || | | | ||| | ||| | ||| | ||| ||||| |||| |||| Sbjct 381466 TAATATTCTGCTTAAGCCTATCATCCCATAACCCAAGCTCTAGTAAATCATTTAGCAAAT 381407 Query 104663 GTTTGTTTACGACGACAAATTCACCCGCGAGTGTTCGTCTCAAATAGATATTGGTCGTAT 104722 | ||||| || | || ||||| | ||| || | ||| || || | ||| Sbjct 381406 GCGGATTTACTACAAAGAACTCACCAGATAGTACTCTACGATGATAAATGTTCGAGGTAA 381347 Query 104723 ACGGTTCGAAACACTCGTTGTTCCCTAAAATCTGGGATGTGGATGCGGTAGGCATAGGTG 104782 | || || |||| ||| ||||| |||||||| || || |||||||| || ||||| || | Sbjct 381346 ATGGCTCAAAACTCTCATTGTTACCTAAAATTTGCGAAGTGGATGCTGTTGGCATTGGAG 381287 Query 104783 CAAGAAGAAGACTATTCATAGTTCCTTTCTTAACAAG------TTTACGCATGGCATTCC 104836 | | ||| ||| | | || | || || |||| ||| || || Sbjct 381286 ATATTAATAGAGAATTACGAATACCATGTTTGGAAATCCTATCTTTAAGCAA---ATCCC 381230 Query 104837 AATCGTATCGACCACTAAACTTTGG-GT--CTCGATCCCACATATCGAATTGAAGAATAC 104893 |||| | | ||| | | ||| || ||| |||||||||| ||||| | ||||| Sbjct 381229 AATCACAAAGTCCAG---AGTCTGGTGTAACTC---CCCACATATCAAATTGTAAAATAC 381176 Query 104894 CTTTACTAAACGGTGACCCCTTAAACGTTTCATAAGGACCGTACATTTCGGCAAGTTCAC 104953 | ||||| || || || | | ||||| || || ||||| |||| ||||| |||| Sbjct 381175 CCTTACTCGCAGGCGAACCGGAATATGTTTCGTATGGCCCGTATTTTTCTGCAAGCTCAC 381116 Query 104954 ACGACGATTCGAGTGATGCGTGGTAGATAGTTTCGAATATATCAATGTTGAGTTTTCTCG 105013 | | ||||| | ||| | |||||| ||| || || | | || | || | | Sbjct 381115 AGCTAGCGTCGAGAGCTGCATAATAGATAACTTCAAAAATTTGTTTATTTAACTTCTTAG 381056 Query 105014 ATTCTTCTGAACCGAATGTCATTCTTAACATGATAAACACGTCAGCGAGACCCTGAACAC 105073 | | || || || | | ||| | | ||| ||||| ||| ||||| || |||| | Sbjct 381055 CTCCCTCAGACTCGTACGGCATACGAAGCATCATAAAACAGTCTGCGAGCCCTTGAATGC 380996 Query 105074 CAATACCGATGGGTCTGTGACGCATATTTGAACGTTTCCCGTTTTCGGTTGGGTAAAAGT 105133 |||| || | || | || | | ||| || ||| | | || | | ||| | Sbjct 380995 CAATCCCCAATGGACGATGTCTTAAATTCGATTTTTTACACTCTTTGAGAGAATAATATC 380936 Query 105134 TTTTATCAATAACCTTGTTTAAGTTACGTGTAACCATTTTCGTAACACGATGTAACTCTT 105193 ||||| | || || || || | |||| || |||||||| | ||||| | Sbjct 380935 CAACGTCAATCAATTTATTCAAATTCCTCGTAATCACCTTCGTAACTTCTTTTAACTTAT 380876 Query 105194 CATGGTTAAACTCGTTCTTCTCGACATCAACGTATTTTGGTAACGCGATTGATGCGAGAT 105253 || | |||| || || | ||||||| ||||||| | | || || || |||| Sbjct 380875 CAAAATCAAACGTCTTGTTATTTTTATCAACGAATTTTGGAAGGCCAATAGACGCCAGAT 380816 Query 105254 TACATACGGCGGTTTCTTCCTTATCCGTAAACTCCAGAATTTCTGTACACAAATTTGATG 105313 |||| ||||| ||| ||| | || | || | |||||||| || || || || Sbjct 380815 TACAGACGGCAACTTCGTCCGTGCTAGTGTATTCTATGATTTCTGTGCATAAGTTACTTG 380756 Query 105314 ATTTAATCGTACCAACGTGTTTATGGTTCGACTTTTC--ATTACACGCGTCTTTGTAAAG 105371 | ||| || || | | ||| ||||| |||||| ||| || ||||| ||| Sbjct 380755 AAACAATAGTTCCCAAATTTTTCTGGTT--ACTTTTGCTATTTGCAGCATCTTTATAACA 380698 Query 105372 CATATATGGGGTTCCCGTTTCACTTTGGGATTTAATAATTGCTTTCCAAATCTCCGAAGC 105431 ||| |||| || ||||| ||| |||| | | | ||| ||||| | | || Sbjct 380697 AATAAATGGTGTCCCCGTCTCAATTTGAGCCTGTAAGATTAAGAACCAAAGTTTCTGCGC 380638 Query 105432 TGGTACAAC--TTTAGTTGCGATACCTTCAGATTCGTATTTCTCGTAAAGATCTTCAAAC 105489 | | || | ||| || | |||| || || | || || || | | ||| Sbjct 380637 T--TTCATCGTTTTCCTTCCACGGCCTTGTTTCTCATACTCTTCATATAGCTTCTTAAAA 380580 Query 105490 TCTTTACCGTACACGTCT-GAAAGACCCTTTGCCTG-ATCAGGACAAAACAATGACCAAT 105547 || | || | || ||| | || |||| || | ||| || || | | | ||||| Sbjct 380579 TCATCGCCCCAAACATCTTGCAATCCCCT--GCATTCATCTGGGCACATTAGAGTCCAAT 380522 Query 105548 TACCATCGGATTCAACGCGTTTCATGAACAAATCTGGAATCCACATGGCTGAAAAGAGGT 105607 ||| ||||| | || |||||||| ||| |||| ||| | ||| | |||||| | Sbjct 380521 CTTGATCCTTCTCAACTCTTTCCATGAACAGATCAGGAACCCAAAGGGCAGGAAAGAGAT 380462 Query 105608 CTCGACACCTCGCCTCTTCATCACCTTGATTCAAACGAATTTCGAGAAAATCGAGAATAT 105667 | ||||| ||| |||||| | || |||||| | ||||| | ||| || | || || Sbjct 380461 CGCGACATCTCATCTCTTCCTTTCCGTGATTCTTCCTGATTTCAATAAACTCTACAACAT 380402 Query 105668 CGGCGTGCCATGGTTCTAAATAGACTGCAATAGACCCTTTACGACGCCCCGC---TTGAT 105724 | ||||||| || || ||||| | |||||| | |||||||| ||| | ||||| Sbjct 380401 CAACGTGCCACGGCTCCAAATAAATTGCAATGGCACCTTTACGCTTCCCTCCACCTTGAT 380342 Query 105725 TGACATATCTTGCGGTTGAGTTATACACTCGTAACATTGGAATAATACCATCGGATGTTC 105784 | ||| || || || ||||| || || | ||| ||||| | |||| ||| | | Sbjct 380341 CAATATACCTAGCAGTGTCATTATAAACGCGCAGCATCGGAATTAATCCATTAGATCTCC 380282 Query 105785 CATTTGTTCCACGAATATGTGATTTATTTGCACGTACATCGTGAACGTGTAACCCAATAC 105844 |||||||||| ||||||| ||| | || | | | || || | ||||| || Sbjct 380281 CATTTGTTCCTCGAATATATGAACCAGTTCCTCTAATATTACTCACTGCCACCCCAAGAC 380222 Query 105845 CCCCAGCCCACTTACTGATACGCGCACACTCTTTTACTGTATCGTAAATACCGTCGATAC 105904 | || || |||||| || || || | ||| ||| || | ||||||| || Sbjct 380221 CACCCGCAGTCTTACTAATGTTTGCGCATTTAGTTAGTGTGTCAAAGATACCGTTTATTG 380162 Query 105905 TATCTTCCTTATTCGCAATCAGGAAACACGATGACATTTGTGGTCTGGGTGTACCAGCAT 105964 |||||| | || | | ||||| ||||||||||| |||| || || || | || Sbjct 380161 AATCTTCTGGAATCCTGAGTAAAAAACAAGATGACATTTGAGGTCGTGGAGTGCCTGAAT 380102 Query 105965 TGAACAGAGTTGGTGTTGCATGAATGAACAAACCTTTCGATAACGCTTCGTATGTTTCCA 106024 | || || || |||||||||||| | || | || ||||||| || |||||||| | Sbjct 380101 TAAAGAGTGTGGGTGTTGCATGAGTAAAATATTTTTGCGATAACAACTCATATGTTTCAA 380042 Query 106025 GGACGTGATCAATATCGTGTCCATGAATACCAATAGCGACGCGCATATAGAGATATTGGG 106084 | | |||||||| | |||||||||| || ||| ||||| |||| ||| | Sbjct 380041 GTGCAGCTTCAATATCACCACAATGAATACCACAAGAGACCCGCATCAGAAGATGTTGTG 379982 Query 106085 GTGTTTCAATAATTTCACCGTCAATTTTCTGGAGATACCCTTTTTCAAGTGTTTTTAAAC 106144 || |||| | || || ||||||||| | ||||| | |||| || ||||| || Sbjct 379981 GTCTTTCCACAACTTTGTTGTCAATTTTAAGAAGATAGGATCTTTCTAGAGTTTTGAAGG 379922 Query 106145 CAAAATACCCAAACTCAAAATC 106166 ||||||| | | |||||||| Sbjct 379921 CAAAATAATCGTATTCAAAATC 379900 >seq9 Length=379940 Score = 165 bits (182), Expect = 1e-35 Identities = 338/499 (68%), Gaps = 9/499 (2%) Strand=Plus/Minus Query 183161 CCGGTACCAATACCTTCAGTTCCATTTACCAAAACGGTCGGTAATATAGGAACATAATAG 183220 || |||||||| || ||||| ||||||||||||| | || | ||| ||||| ||||| Sbjct 191915 CCTGTACCAATTCCATCAGTACCATTTACCAAAATCATTGGAATTATTGGAACGTAATAT 191856 Query 183221 TCAGGTTCGATTTGTTTACCGTCGTCGTCGAGATAGTTTAATACTGGATCATC----TTT 183276 |||||| ||||||| || || || | | ||| |||||| |||||||| | | Sbjct 191855 AAAGGTTCAATTTGTTGTCCATCATCATATAAATAAGTTAATAAAGGATCATCAGCCTCT 191796 Query 183277 GGGATCAAAAAGTATTCTCGCGTTTTTAGTCAATTTTGTAAATATATACCTGGTTTGACT 183336 |||| ||| ||| || | ||||| | || ||||||||||| | | ||| Sbjct 191795 GGGA---AAATATAT-CTAGTCCATTTAGATAGCTTAGTAAATATATAACGAGCAGCACT 191740 Query 183337 CGCGTCTTTACCACCCATGAGACGTGTACCAAATTGACCACATGGTTCGAGTAAATTAAT 183396 || ||||| ||||| | |||||||||||||||||||||| | || ||| | Sbjct 191739 TGCATCTTTTCCACCTTCTTTTCTACTACCAAATTGACCACATGGTTCTAATAGATTTAG 191680 Query 183397 ATTATTCGACCCCGTAAAATTATGTGCTAATTTTACAATTGTATCTGCCAAAGAGACTTC 183456 |||||| || |||||| || || | || ||||| ||| | ||| || ||| Sbjct 191679 ATTATTACTTCCAACAAAATTTTGAGCCATATTAACAATAGTACTTTGCAATGATGATTC 191620 Query 183457 ACCGTGGTGATACGATGTTTTTTCCGAAACGTATGCGGCTAATTGCGCAACCTTCATTTC 183516 || || ||||| | | | ||| | ||| || | |||||||| ||||| || | ||| Sbjct 191619 TCCATGATGATAAGCACTATGTTCAGCAACATAACCAGCTAATTGTGCAACTTTAAGTTC 191560 Query 183517 AGATGTAAGATTCTTTGTGAAACACGCGTATAACACTTTTCGTTGGGATGGTTTTAAACC 183576 | |||| || ||| | || || | | ||||||| ||| ||||||||||| Sbjct 191559 ATTATTAAGCTTTTTTTTAAATGTTGCAAAAAGTACTTTTCTTTGTCCAGGTTTTAAACC 191500 Query 183577 ATCTGAAACGTGTGCAATCGACCTTTTCAAATCAGCAAGACTGAAATTTACAAGATCTTT 183636 |||| | | | || ||| || || | |||| ||| || |||||| ||||| Sbjct 191499 ATCTAATAAATTTGGAATAGATCTAGTAGTATCATATCTACTAAATAATACAAGTTCTTT 191440 Query 183637 ATGAATAAAATCAGAAATA 183655 ||||||||||||| ||||| Sbjct 191439 ATGAATAAAATCA-AAATA 191422 >seq4 Length=1026413 Score = 107 bits (118), Expect = 2e-18 Identities = 210/303 (69%), Gaps = 13/303 (4%) Strand=Plus/Plus Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748 |||| ||||||| ||| ||||||||||||| ||| || | || | |||||| | ||| Sbjct 787886 GCACCAACATTCATAATTCCATTTGCATCAATATCAAAGGTGACTTCAATTTGAG--GTA 787943 Query 6749 CCCCTC--GGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCG 6806 |||||| ||||| | ||||| ||| | | |||||| ||||| || | ||||| | Sbjct 787944 CCCCTCTGGGTGCTGGAGGAATTCCCATCATTTCAAATTGTCCAAGCAACTTATTATCAG 788003 Query 6807 TCGC--CTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTG 6864 || |||| | ||| |||| | ||||||||| || || |||||| ||| Sbjct 788004 CAGCAAATTCT--CTTTCTCCTTGGAAAACTTTAATTCCAACTTGAGTTTGATTGTCTGC 788061 Query 6865 TGCCGTTGAGAAGA-TTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCG 6923 || || ||||| | || | ||||| |||| || || || |||||||| ||| | Sbjct 788062 AGCAGTGGAGAATACTTGGCTCTTT-TTAGTAGGTATTGTGGTATTTCTGTTAATTAATC 788120 Query 6924 GGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTA 6983 | || | || ||||||| |||||| | || | ||| | ||||| ||||| ||||| Sbjct 788121 GAGTAAAAACTCCACCCAAAGTTTCAATACCTAAAGATAAGGGTGTAACGTC---GAGTA 788177 Query 6984 ACA 6986 ||| Sbjct 788178 ACA 788180 Score = 82.4 bits (90), Expect = 1e-10 Identities = 196/291 (67%), Gaps = 8/291 (3%) Strand=Plus/Plus Query 7493 GTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCA 7552 || ||||| |||||||| | || || ||| | ||| | |||| ||| || ||||| Sbjct 788687 GTTGCTTTAACTTCAAACACTCCGCCAAGAATCTCTAAAATAGAAATATCGAAAGTACCT 788746 Query 7553 CCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTAC 7612 || |||| ||| ||| | || | || | | | ||| | | || || | ||||| Sbjct 788747 CCTCCCAAATCATAAAC---TGCGATTGTTTTGCCATCT--GCTTTT-TCCATTCCGTAT 788800 Query 7613 GCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAG-ACAGTTCAGGCCAGCAATAGT 7671 || | ||| || || ||||| |||||||| || | ||| || || || || |||| Sbjct 788801 GCAAGAGCTGCTGCTGTTGGCTCATTAATGATTCTTGTTACATTTAAG-CCTGCTATAGA 788859 Query 7672 TGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGAC 7731 | ||||| || || ||||| || || ||||| |||||||| || || || || | || Sbjct 788860 GCCAGCATCCTTAGTTGCTTGACGCTGAGAATCATTAAAGTAAGCTGGCACAGTAATAAC 788919 Query 7732 CGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTT 7782 || | | | || |||| ||||| | ||| || | ||||||||||| Sbjct 788920 AGCATGCTTTACACCTCTACCAAGATAAGTTTCGGCAGTTTCTTTCATTTT 788970 >seq6 Length=863389 Score = 91.5 bits (100), Expect = 2e-13 Identities = 168/241 (70%), Gaps = 9/241 (4%) Strand=Plus/Plus Query 11445 TTTCTTACCAATCGCATCAATTTCATCTATAAAGATAATACACG--GTTGATTTTCACGT 11502 |||||| |||| |||||||||||||| ||||| | ||||| | | | ||||| | | Sbjct 730123 TTTCTT-CCAACTGCATCAATTTCATCAATAAAAACAATACTTGGAGATAATTTT--CTT 730179 Query 11503 GCCAATTCAAATATATCACGGACTCTTTTTGCGCCTACGCCTACAAACATTTCAACGAAC 11562 ||| | ||||| || | ||||| |||| || | || ||||| || |||| || Sbjct 730180 GCCTGTGAAAATAATTCTCTTACTCTACTTGCACCCATTCCAACAAAAATCTCAATAAA- 730238 Query 11563 GATGAC--CCCGAACACTGAATAAAAGGAACGGAAGATTCACCCGCTATAGCACGTGCTA 11620 || || || || | || ||| || || || |||||| || | ||| ||| | Sbjct 730239 -ATCACTTCCAGATATATAAAAAAATGGTACATTAGCTTCACCAGCAACAGCTTTTGCCA 730297 Query 11621 AAAGTGTTTTACCTGTACCTGGTTTACCTGTTAATAATGCACCCCTTGGTATTTTAGCAC 11680 | | ||||||||| ||||||||| ||| ||||| ||||| |||||||||| |||| Sbjct 730298 ATAATGTTTTACCGGTACCTGGTGGTCCTACCAATAAAGCACCTTTTGGTATTTTTGCAC 730357 Query 11681 C 11681 | Sbjct 730358 C 730358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132657095120