Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20parvum_20[genbank_20GCA_5F001306245.1_202015-10- 01] 18 sequences; 9,221,024 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq13 605 4e-168 seq1 408 6e-109 seq7 170 3e-37 seq2 111 2e-19 seq4 102 1e-16 >seq13 Length=98922 Score = 605 bits (670), Expect = 4e-168 Identities = 1114/1607 (69%), Gaps = 47/1607 (3%) Strand=Plus/Plus Query 195295 TCAAGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGA 195354 || |||||||||||| |||||||| || || ||||||||||||||||||||| ||| || Sbjct 2622 TCCAGCTATTGGTATTGATTTAGGTACCACATACTCATGTGTTGGTGTATGGAGAAACGA 2681 Query 195355 TCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTT 195414 | |||||| ||| | || || || ||||| ||||||||||| ||||| || || || || Sbjct 2682 TACTGTAGATATTGTTCCAAACGATCAAGGTAACCGTACAACACCATCATATGTAGCATT 2741 Query 195415 TACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTAT 195474 |||||| | ||| ||||| |||| ||||| ||||| || || |||| ||||| Sbjct 2742 TACAGAAACTGAGCGTCTTATTGGTGATGCAGCAAAGAACCAAGTTGCTAGAAACCCAGA 2801 Query 195475 CAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCA 195534 ||||| || ||||| || || |||||||||||| | |||||| ||| || ||| || Sbjct 2802 AAATACAGTTTTTGATGCTAAACGTCTTATTGGTAGAAAGTTTGATGATCAGGCAGTACA 2861 Query 195535 AGACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGAT 195594 | ||||| | ||||| | | | |||| ||| ||| || ||||| || || Sbjct 2862 AAGTGATATGACTCACTGGCCATTTAAAGTAGTTAGAGGTCCAAAGGACAAGCCAATCAT 2921 Query 195595 TAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGT 195654 | ||| | | ||||| ||||| |||| | | ||||||||||| ||||||| Sbjct 2922 CAGTGTAAACTACTTAGGTGAAAAGAAGGAATTCCATGCTGAAGAAATTTCTGCTATGGT 2981 Query 195655 GTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGT---AAAACTGTGAAAGATGC 195711 || ||||||||||||| | ||| | | | ||||| ||| | ||| | || Sbjct 2982 TTTACAAAAGATGAAGGAGATCTCTGAAGCATACTTGGGTCGCCAAATTAAGAACGCTGT 3041 Query 195712 AGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGC 195771 |||| ||||| || ||||| |||| ||| ||||| || || || |||||||| || | Sbjct 3042 AGTT---ACTGTTCCAGCTTATTTCAATGACTCACAGCGTCAAGCAACAAAGGATGCAGG 3098 Query 195772 TGCTATTGCGGGTCTAAACTGT-CTTAGAATTATCAATGAACCAACAGCGGCTGCAATTG 195830 ||| ||||| ||| | || ||| | ||||| || || || ||||| || ||||| |||| Sbjct 3099 TGCAATTGCTGGTTTGAA-TGTAATGAGAATCATTAACGAGCCAACTGCAGCTGCTATTG 3157 Query 195831 CTTATGGTCTGGACAAGAACAAGGAC-GAAGATAAAAATGTATTGATCTTTGATCTCGGT 195889 |||||||||| || ||||| | | || | || | ||||||||||||||| ||| | ||| Sbjct 3158 CTTATGGTCTTGATAAGAA-AGGAACTGGCGAGAGAAATGTATTGATCTTCGATTTAGGT 3216 Query 195890 GGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCT 195949 |||||||| |||||||| ||| | | | |||||||| |||||| || ||||| || ||| Sbjct 3217 GGTGGTACTTTTGATGTATCATTATTAACTATTGAAGATGGTATTTTTGAAGTTAAAGCT 3276 Query 195950 ACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGT--CATT 196007 || |||||||||||||| | |||||||||||||| ||| | || ||| ||| Sbjct 3277 ACCGCTGGTGATACTCACTTGGGTGGTGAAGATTTTGATAACAGACT----CGTAGAATT 3332 Query 196008 -TGTCT-GATGAGTTCCGTCGAAAGAATA-AG--AAAGATATTTCTGGAAATCCTAGGGC 196062 ||| | | || ||| ||||||||| || | ||| | | |||| |||| || Sbjct 3333 CTGTGTACAAGATTTCAAGAGAAAGAATAGAGGTATGGATTTAACCACAAATGCTAGAGC 3392 Query 196063 TCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCA 196122 | | | | || || ||| ||| || ||||| || ||||| | || ||| | |||| Sbjct 3393 TTTAAGAAGACTCAGAACTCAATGCGAGCGTGCAAAGAGAACTTTGTCATCTTCTACTCA 3452 Query 196123 AACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACA---ACTATTAC 196179 | | | ||||| | ||||| | | ||| || ||||| ||| || | || | Sbjct 3453 AGCTACAATTGAGTTAGATTCACTCTATGAAGGTATTGA---TTATTCAGTTGCCATCAG 3509 Query 196180 CCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTT--TAGGAAGTGTATGGAACCTGTT 196237 | || | || ||||| | | |||||| || | || | || | || ||| Sbjct 3510 TAGAGCTAGATTCGAAGAACTCTGCGCTGATTACTTCCGTGCAACTTTA--GCTCCAGTT 3567 Query 196238 GAACAAGTACTTCGTGACGCAAAGATGGATAAG---TCTAAGGTTGATGAAATTGTCCTT 196294 || ||||||| || || ||||| ||| ||| || |||| |||| | Sbjct 3568 GAGAAAGTACTCAAGGATGCTGGTATGGACAAGAGATCT---GTACATGATGTTGTATTG 3624 Query 196295 GTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAAT 196354 || || || || || |||||||| ||| |||| || || ||||| || | Sbjct 3625 GTTGGTGGTTCTACACGTATTCCAAAGGTTCAGGCCTTGATTCAGGAATTCTTTAACGGT 3684 Query 196355 AAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAG 196414 ||||| | |||| | ||||| || || ||||| |||||||||||||| || || || Sbjct 3685 AAAGAGCCATGCAAAGCAATCAATCCAGACGAAGCTGTTGCTTATGGTGCTGCTGTACAA 3744 Query 196415 GCTGCTATTCTCTCAGGTGTTGA-CAAT--AATAACGTCCAAGATCTTCTGCTACTTGAT 196471 ||||||| ||| | || ||| |||| | ||| || ||||| | || | ||| Sbjct 3745 GCTGCTA---TCTTAAATGGTGAGCAATCCTCTGCCGTACAGGATCTCTTATTATTGGAT 3801 Query 196472 GTTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGAT 196531 ||||| || |||| || ||| | ||||| || |||||||||||||| || ||||||| Sbjct 3802 GTTGCTCCATTATCACTCGGTTTAGAAACTGCTGGTGGTGTTATGACCAAGCTTATTGAA 3861 Query 196532 AGGAACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAA 196591 | || |||||||| || | |||||| ||||||||| | || ||| | ||||| || Sbjct 3862 CGTAATACAACTATCCCAGCAAAGAAGACACAAGTCTTCACTACTTATGCTGATAACCAG 3921 Query 196592 CCAGGTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTA 196651 ||||| || ||||| ||||| || || | || | |||||||||||||| Sbjct 3922 AGTGGTGTCTTGATCCAAGTTTATGAGGGTGAGAGAGCCATGACTAAGGATAACCATCTC 3981 Query 196652 CTTGGAACTTTCGAT-TTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAA 196710 || |||| ||| || |||| || |||||| | ||||| |||||||| ||||| ||| | Sbjct 3982 CTCGGAAAGTTCCATCTTGA-TGGTATTCCACCAGCACCAAGAGGTGTACCACAAATTGA 4040 Query 196711 TGTTTGCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTC 196770 || ||| ||||| || || ||||| || | || || | |||| || ||| | | Sbjct 4041 AGTCACCTTTGATATTGATGCTAATGGTATCTTGAATGTGTCTGCTGTTGATAAGAGTAC 4100 Query 196771 TGGCAA-ATCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAA 196829 ||| || | | | ||||| ||||| || || ||||| | | || ||||| || | Sbjct 4101 TGGTAAGAGCAG-CAAGATCACTATTACTAACGATAAGGGTAGATTATCAAAGGACGATA 4159 Query 196830 TTGAACGTATGGTTCAAGATGCGGAAAAGTACAGGGAAGAAGACGAG 196876 |||||||||||||| | ||||| || || |||| || || || ||| Sbjct 4160 TTGAACGTATGGTTAATGATGCTGAGAAATACAAGGGTGAGGATGAG 4206 >seq1 Length=1295191 Score = 408 bits (452), Expect = 6e-109 Identities = 1052/1576 (67%), Gaps = 56/1576 (4%) Strand=Plus/Plus Query 195298 AGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCG 195357 || |||||||||||||||||| |||||||| |||||||||||| | | | |||| | | Sbjct 79973 AGTTATTGGTATCGATTTAGGTACTACTTATTCATGTGTTGGTATCTACAAGAATGGTAG 80032 Query 195358 TGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTAC 195417 ||||||||||| || ||||| ||||| || |||| || ||||| || || | || || Sbjct 80033 AGTAGAGATTATTCCAAATGAACAAGGTAATCGTATTACACCATCATATGTATCATTCAC 80092 Query 195418 AGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAA 195477 ||| |||| | | |||| || | || || ||||| | |||| || || | | Sbjct 80093 TGATGATGAGAGATTGATTGGTGAATCAGCCAAGAATCAAGCTACTATCAATCCAGTTCA 80152 Query 195478 TACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGA 195537 ||| | || || | ||| | ||||||||||| ||| |||| | |||||| | Sbjct 80153 GACTTTGTTCGATGTAAAGAGACTTATTGGTCGTCGCTTTAAGGATGATTCCGTCCAAAA 80212 Query 195538 CGATATAAAGGACTGGTCT----TATGAAGTTGTTCCCGGTG-TGGCTGATAAGCCTATG 195592 |||| |||| || ||||| || || | | | || |||||| Sbjct 80213 GGATAA----GACTTTGCTACCATATGAGATTATTAACAAAGATAGC----AAGCCTTAC 80264 Query 195593 ATTAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATG 195652 || | ||| || | ||||||||||| ||||| || || ||||| |||| ||||| Sbjct 80265 ATACAAGTTTCTGTTAAGGGTGAGAAGAAGCAATTAGCCCCAGAAGAGGTTTCAGCTATG 80324 Query 195653 GTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCA 195712 || ||| | ||||||||||| | ||| || ||| | ||||| || || ||||| Sbjct 80325 GTCTTGGTCAAGATGAAGGAAATTGCTGAGGCTTATCTCGGTAAGGAAGTAAAGCATGCA 80384 Query 195713 GTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCT 195772 ||| | ||||| || |||||||| | |||| | || || ||||| || ||||| |||| | Sbjct 80385 GTTATTACTGTCCCAGCTTACTTTAATGATGCTCAGCGTCAGGCTACCAAGGATGCTGGT 80444 Query 195773 GCTATTGCGGGTCTAAACTGT-CTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGC 195831 |||||||| ||| | || ||| || | ||||| ||||| |||||||| || |||||||| Sbjct 80445 GCTATTGCCGGTTTGAA-TGTAATTCGTATTATTAATGAGCCAACAGCAGCAGCAATTGC 80503 Query 195832 TTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGG 195891 || |||| |||||||||| || ||||| | | || | | ||| | ||||| Sbjct 80504 TTTTGGTTTGGACAAGAAGGCTGA-GAAGAGCA-----TTTTAGTATACGATTTGGGTGG 80557 Query 195892 TGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTAC 195951 |||||| |||||||| || || | | ||||| ||| | ||||| || ||||| Sbjct 80558 TGGTACTTTTGATGTTTCTCTCTTGACCATTGATAACGGTGTTTTCGAGGTCGTTGCTAC 80617 Query 195952 TGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCA-TTTGT 196010 ||||||||| ||| | || ||||| ||||||||| | || | || ||| | Sbjct 80618 AAGTGGTGATACCCATTTGGGAGGTGAGGATTTCGATCAGAGAGTTATGGACCACTTTAT 80677 Query 196011 C-TGATGAGTTCCGTCGAAAGAATAAGAAA-GAT---ATTTCTGGAAATCCTAGGGCTCT 196065 | ||| | | ||| |||| | | |||| ||| | |||| || || || || Sbjct 80678 CAAGATCA-TCAAGTC-AAAG-ACAGGAAAGGATGTAAAGTCTGACAA---GAGAGCCCT 80731 Query 196066 TCGTCGGCTTAGGACTGCATGTGAACGTGCCAAA-CGAACTCTCTCTTCTACGGCTCAAA 196124 || |||||||| | | || | | |||| || |||| ||||| | | ||| Sbjct 80732 TCAGAAGCTTAGGAGAG-AGGTCGAGAAGTCAAAGAGAGCTCTTTCTTCAGCTCCACAAG 80790 Query 196125 CAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTG 196184 | ||| |||||||| ||| | || | | || || ||| | ||| | | Sbjct 80791 TTAAGGTCGAGATTGAAGGTTTGATGGAGGATGTAGATTTGAGCGAAACCTTGACCAGAG 80850 Query 196185 CACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAG 196244 | || || ||||| || |||| ||||| || ||| ||| || || ||| || ||| Sbjct 80851 CTAAATTCGATGAGTTGAATGCTGACTTGTTCAGAAAGACTATCGAGCCAGTT-AAGAAG 80909 Query 196245 TACTTCG-TGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGA 196303 || | || || || | |||||| | || ||||| || || | || || || Sbjct 80910 GTTTTGGAGGATGCTGGAATCAAAAAGTCTGAAGTAGATGAGATCGTTTTGGTTGGTGGT 80969 Query 196304 TCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAG--CTTCTTCAATAATAAAGATT 196361 || || ||||| || ||||||||| || || || ||||| || || || Sbjct 80970 TCTACTCGTATCCCTAAGATTCAAGCCTTG--ATCAAGGAGTTCTTTGATGGAAAGGAGC 81027 Query 196362 TAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTA 196421 ||||| | || ||||| |||||||| || ||||||||||| ||||| || |||| || Sbjct 81028 CAAACAGAGGAATTAACCCAGATGAAGCCGTCGCTTATGGTGCTGCCGTACAAGCTGGTA 81087 Query 196422 TTCTCTCAGGTGTTGACAATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCG 196481 | | |||||| | | || | ||| | | || | |||||| | || Sbjct 81088 TCTTAGCAGGTGAAGGCGGTAGT---------GATTTATTATTATTGGATGTTACTCCTT 81138 Query 196482 TATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAA 196541 || | | ||| |||| || | ||||| |||||||| || | |||| ||| ||||| Sbjct 81139 TAACTTTAGGTATTGAGACTGTTGGTGGAGTTATGACAAAGCTCATTGGTAGAAACACTG 81198 Query 196542 CTATTCCGACTAAGAAGGAACAAGTCTTTTCA--ACGTATTCCGATAATCAACCAGGTGT 196599 | |||| || |||||| |||| |||||| || || |||||||| |||| ||| Sbjct 81199 TTGTTCCAACCAAGAAGAGCCAAG--TTTTCAGTACTTACCAAGATAATCAGCCAGCTGT 81256 Query 196600 TCATATTCAAGTATATGAAGGAGAACGCTCCCGTG-CAAAGGATAACCATCTACTTGGAA 196658 | ||| || || ||||| || || || ||| || | ||||||||| |||| ||||||| Sbjct 81257 ACTTATCCAGGTTTATGAGGGTGAGCG-TCCAATGACTAAGGATAACAATCTCCTTGGAA 81315 Query 196659 CTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCT 196718 ||||| | | || || ||| | || || ||||||||||| || ||| | ||| | Sbjct 81316 AATTCGAGCTTTCTGGAATCCCACCAGCTCCAAGAGGTGTTCCCCAAATTGAGGTTACTT 81375 Query 196719 TCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAAT 196778 | || || || | |||| ||| || | || | || |||| |||| | |||| |||| Sbjct 81376 TTGAAATTGATACTGATGGTATTTTACAAGTTAGTGCAAAGGATAAGGGTACTGGTAAAT 81435 Query 196779 CTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTA 196838 |||| |||||| || || ||||| ||||| | || || |||| || || || |||| Sbjct 81436 CTGAGAAGATTACTATCACAAATGATAAGGGTAGACTCTCACAGGAAGACATAGAGCGTA 81495 Query 196839 TGGTTCAAGATGCGGA 196854 || || | || || || Sbjct 81496 TGATTAAGGAGGCTGA 81511 >seq7 Length=872730 Score = 170 bits (188), Expect = 3e-37 Identities = 175/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 171861 TATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTC 171920 |||||| || ||||| || || | || ||||| |||||||| | || ||||| | || Sbjct 577635 TATGCAGATTTTTGTTAAGACTTTGACAGGAAAGACTATCACTTTGGAAGTTGAACCTTC 577694 Query 171921 AGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCA 171980 ||| ||||| || || | || || |||||||||||||||||||| || ||||| ||||| Sbjct 577695 AGATACAATTGAGAATGTTAAGGCAAAGATTCAAGATAAGGAAGGAATCCCACCTGATCA 577754 Query 171981 GCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAA 172040 ||||| | || ||||| || ||||| | || ||||| | || ||| |||||||||| Sbjct 577755 ACAACGTTTGATCTTTGCAGGAAAACAATTAGAGGATGGTAGAACTCTCTCTGATTACAA 577814 Query 172041 CGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 | ||||||| ||||| ||| ||||| | || || || ||| | |||||| Sbjct 577815 CATTCAAAAAGAGTCCACTTTACACTTAGTCCTGAGACTTAGAGGTGGT 577863 Score = 154 bits (170), Expect = 2e-32 Identities = 159/208 (76%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| || || || || || | || ||||| |||||||| | || |||||| Sbjct 577859 GTGGTATGCAGATTTTCGTTAAGACTTTGACAGGAAAGACTATCACTTTGGAAGTTGAGC 577918 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | ||||| ||||| || || | || || ||||||||||||||||| || || ||||| | Sbjct 577919 CTTCAGATACAATTGAGAATGTTAAGGCAAAGATTCAAGATAAGGAGGGAATCCCACCTG 577978 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 |||| ||||| | || ||||| || ||||| | || ||||| | || ||| |||| | Sbjct 577979 ATCAACAACGTTTAATCTTTGCAGGAAAACAATTAGAGGATGGTAGAACTCTCTCTGACT 578038 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACA 172064 ||||| ||||||| ||||||||| |||| Sbjct 578039 ACAACATTCAAAAAGAGTCTACTTTACA 578066 Score = 154 bits (170), Expect = 2e-32 Identities = 156/203 (77%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945 || ||||| |||||||| | || |||||| | ||||| ||||| || || | || || Sbjct 578417 ACAGGAAAGACTATCACTTTGGAAGTTGAGCCTTCAGATACAATTGAGAATGTTAAGGCA 578476 Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005 |||||||||||||||||||| || ||||| ||||| ||||| | || ||||| || ||| Sbjct 578477 AAGATTCAAGATAAGGAAGGAATCCCACCTGATCAACAACGTTTGATCTTTGCAGGAAAA 578536 Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065 || | || ||||| | || ||| ||||||||||| ||||||| ||||| ||| ||||| Sbjct 578537 CAATTAGAGGATGGTAGAACTCTCTCTGATTACAACATTCAAAAAGAGTCCACTTTACAC 578596 Query 172066 CTTGTTCTAAGGCTTCGGGGTGG 172088 | || || || ||| | || || Sbjct 578597 TTAGTCCTGAGACTTAGAGGCGG 578619 >seq2 Length=1238148 Score = 111 bits (122), Expect = 2e-19 Identities = 1145/1828 (63%), Gaps = 46/1828 (3%) Strand=Plus/Plus Query 77870 GACTTTGAATTTGGGTATTTTGGATTGAAGACTCTCGAAAAAAGTTACCTGCAGTACATG 77929 || ||||||| | ||||||| || || ||||| |||| | || || | | || Sbjct 379900 GATTTTGAATACGATTATTTTGCCTTCAAAACTCTAGAAAGATCCTATCTTCTTAAAATT 379959 Query 77930 GATGGAAAGCTCATGGAGACACCTCAATACTTATTCATGCGTGTTTCTATTGGTATTCAT 77989 || || | |||| | ||| ||| | | | ||||| || ||| |||||||||| Sbjct 379960 GACAACAAAGTTGTGGAAAGACCACAACATCTTCTGATGCGGGTCTCTTGTGGTATTCAT 380019 Query 77990 GGAAATGATATTCCAGCGGTACTTGAAACGTATGATAAAATGTC-CAATGGTATGTTTAT 78048 | ||||||| ||| | ||||||||| ||||| | || ||| ||| |||| Sbjct 380020 TGTGGTGATATTGAAGCTGCACTTGAAACATATGAGTTGTTATCGCAAAAATAT-TTTAC 380078 Query 78049 TCACGCAACACCTACTTTGTTTAATGCAGGTACTCCCCGTCCACAGATGTCATCTTGTTT 78108 ||| |||||||| || | |||||| |||| ||||| || || || |||||||||||||| Sbjct 380079 TCATGCAACACCCACACTCTTTAATTCAGGCACTCCACGACCTCAAATGTCATCTTGTTT 380138 Query 78109 CCTACTTGCAAATAAGGAGGACTCTATTAATGGTATATACGGGACTCTCACAGAGTGTGC 78168 |||| | | || || || || || ||||| | | || || || | || || Sbjct 380139 TTTACTCAGGATTCCAGAAGATTCAATAAACGGTATCTTTGACACACTAACTAAATGCGC 380198 Query 78169 TCAGATTTCTAAGTGGGCTGGTGGTATAGGTCTTCATATTCACGATGTTCGTGCAAACAA 78228 | ||| |||| || |||||| | || | | || || | | ||| Sbjct 380199 AAACATTAGTAAGACTGCGGGTGGTCTTGGGGTGGCAGTGAGTAATATTAGAG-GAACTG 380257 Query 78229 GTCCA-GGATTAGAGGAACTAATGGTCAGTCTGATGGAATTATTCCTATGCTTAGGGTAT 78287 || || ||| ||||||| ||||| ||| ||||| | ||||| ||||| | || | Sbjct 380258 GTTCATATATTCGAGGAACAAATGGGAGATCTAATGGATTAATTCCGATGCTGCGCGTTT 380317 Query 78288 TCAATGCTACAGCACGCTATGTCAACCAAGCGGGTCGTAGG----AAGGGGTCATTCGCT 78343 |||| || || | ||| | | |||| || | | | |||| | |||| || Sbjct 380318 ATAATGACACTGCTAGGTATATTGATCAAGGTGGAGGGAAGCGTAAAGGTGCCATT-GCA 380376 Query 78344 ATGTACCTTGAACCTTGGCACGCCGATGTAATGGATTTTTTGGAACTTCGTCTCAACCAG 78403 || || | || || ||||||| ||||| | || ||| | ||| | | || || Sbjct 380377 ATTTATTTGGAGCCGTGGCACGTTGATGTTGTAGAGTTTATTGAAATCAGGAAGAATCAC 380436 Query 78404 GGTGACGAGGAAGCTCGATGCAGGGATTTATTCACTGCTATGTGGATTCCGGATCTTTTT 78463 || | || || |||| | ||| | || |||| | ||| |||| ||||| || Sbjct 380437 GGAAAGGAAGAGATGAGATGTCGCGATCTCTTTCCTGCCCTTTGGGTTCCTGATCTGTTC 380496 Query 78464 ATGAAGAGAGTTGAGGAAGGAGGTA-AATGGTCTCTTTTCTGTCCAGATAAGACTAAGGG 78522 ||| | |||||||| |||||| | | ||| |||| | || |||||| | | |||| Sbjct 380497 ATGGAAAGAGTTGA-GAAGGATCAAGATTGGACTCTAATGTGCCCAGATGA-ATGCAGGG 380554 Query 78523 TCTTTC-AGATGTATACGGGGAAGAATTCGAAAAATTGTACACTAAATACGAAGAGGAAG 78581 || | |||||| | || || || || | || | || | || || | ||| Sbjct 380555 GATTGCAAGATGTTTGGGGCGATGATTTTAAGAAGCTATATGAAGAGTATGAGAAACAAG 380614 Query 78582 GTCTCGCTATTAAGACAATTGATGCATCTGAACTATGGAAAGCTATTATCAAAAG-TCAA 78640 | | | | || || || | || |||| ||| || | | | | | |||| Sbjct 380615 GCCGTGGAAGGAAAACGATGAAAGCGCAGAAACTTTGG-TTCTTAATCTTACAGGCTCAA 380673 Query 78641 ACAGAGACCGGCACCCCGTATATGCTATACAAAGACAGCTG-TAACAGAAAGTCTAACCA 78699 | ||||| || || || | ||| || ||||| |||| || || || |||||| Sbjct 380674 ATTGAGACGGGGACACCATTTATTTGTTATAAAGA-TGCTGCAAATAGCAAAAGTAACCA 380732 Query 78700 AAAGAACCTAGG---TGTCATCAAAAGCTCTAACCTTTGCACAGAAATTCTGGAATACAC 78756 || || | || | | | ||| |||| | ||||||||||| | |||||||| Sbjct 380733 GAAAAATTTGGGAACTATTGTTTCAAG---TAACTTATGCACAGAAATCATAGAATACAC 380789 Query 78757 GGATAAGAATGAAACAGCTGTATGTAATCTAGGGTCTATCGCTCTACCAAAGTTTGTTGA 78816 | | | ||| || || |||||||| | |||||| | || ||||| || ||||| Sbjct 380790 TAGCACGGACGAAGTTGCCGTCTGTAATCTGGCGTCTATTGGCCTTCCAAAATTCGTTGA 380849 Query 78817 TCGAGAATTA-AAGACATTTGATTATTCAAAGCTCCACGAAATTACAAAAATCGTAACTA 78875 | | ||| | ||||| ||||||| | ||| | | ||| |||| || | | || | Sbjct 380850 T-AAAAATAACAAGACGTTTGATTTTGATAAGTTAAAAGAAGTTACGAAGGTGATTACGA 380908 Query 78876 AAAATTTAAATCGTGTAATTGACCGTAACTACTACCCAGTC-GAGACTGCTAAATATTCT 78934 ||||| ||| | |||||| | || || | || ||| || |||| | || Sbjct 380909 GGAATTTGAATAAATTGATTGACGTTGGATATTATTCTCTCAAAGAGTG-TAAAAAATCG 380967 Query 78935 AATATGAAACATAGACCAATTGGTCTAGGTGTTCAAGGATTGGCAGA-TGTATTCAACTT 78993 ||| | | |||| | ||| | || | || ||||||| | ||||| ||| || | | Sbjct 380968 AATTTAAGACATCGTCCATTGGGGATTGGCATTCAAGGGCTCGCAGACTGT-TTTATGAT 381026 Query 78994 GTGTGGTCTTCCCTTCGATTGCGAAGATTCAAGGACTATGAATGCTCATATTTTCGAGAC 79053 | | || | || | ||| | || | | | || | ||| || ||||| || Sbjct 381027 GCTTCGTATGCCGTACGAGTCTGAGGGAGCTAAGAAGTTAAATAAACAAATTTTTGAAGT 381086 Query 79054 TATTTATCATGCAGCTTTAGAAGCAAGTTCAGAACTTGCTGAAATTAATGGGCCTTATGA 79113 ||| ||| |||||||| | || || || | || ||||| |||| | ||||| || || Sbjct 381087 TATCTATTATGCAGCTCTCGACGCTAGCTGTGAGCTTGCAGAAAAATACGGGCCATACGA 381146 Query 79114 GAGTTTCGAGGGTTCACCCGCTTCACAAGGTCTTCTTCAACCAGATCTATGGGAAGGTGA 79173 | | ||||| || || | ||| || | ||| ||| | |||| || | Sbjct 381147 AACATATTCCGGTTCGCCTGCGAGTAAGGGTATTTTACAATTTGATATGTGGGGAGTTAC 381206 Query 79174 AGCTAAATACAGTGGTCGTTACGATTGGGA--TGCAATGAGAAAGCGTGTAATGACGAAG 79231 | | | || ||| | || |||||||| ||| ||| || | | || | Sbjct 381207 ACC---AGACTCTGGACTTTGTGATTGGGATTTGCTTAAAGATAGGATTTCCAAAC--AT 381261 Query 79232 GGTCTGAGAAACAGTCTTCTCGTAGCACCAATGCCCACTGCTTCGACGGCTCAGATCCTC 79291 ||| | | || ||| | || | |||||||| || || || || | || || | Sbjct 381262 GGTATTCGTAATTCTCTATTAATATCTCCAATGCCAACAGCATCCACTTCGCAAATTTTA 381321 Query 79292 GGTAATAATGAGTGTTTTGAACCATACACTACAAACATATATCTTCGTCGCACATTAGCT 79351 ||||| |||||| ||||||| |||| || | ||||| |||| |||| | | || || Sbjct 381322 GGTAACAATGAGAGTTTTGAGCCATTTACCTCGAACATTTATCATCGTAGAGTACTATCT 381381 Query 79352 GGTGAATTTGTTGTGGTTAACAAACATCTTGTTGAA-GATTT-GAAGAAGTTAGGTCTTT 79409 ||||| || |||| || || ||| ||| | || ||||| ||| || ||| | Sbjct 381382 GGTGAGTTCTTTGTAGTAAATCCGCAT-TTGCTAAATGATTTACTAGAGCTTGGGTTATG 381440 Query 79410 GGTCAAAAGAGATGAA--AGACT-TAATGGTCAAAGCCGGAGGGAGTGTGCAAAACATAG 79466 || | || | | || ||| | | || | |||| || ||| | ||||| ||| Sbjct 381441 GGATGATAG-GCTTAAGCAGAATATTATTG-CAAA--TAATGGCAGTATTCAAAATATAC 381496 Query 79467 TAGAGATACCAGATAATATTAAAAATCTTTATAAGACTGTTTGGGAAATTAGCCAAAAAT 79526 | || || || |||| | |||||||||||||| |||||||||| ||||| Sbjct 381497 TTACAATTCCGGAAGATATACGCGAGCTTTATAAGACTGTATGGGAAATTAAGCAAAAGA 381556 Query 79527 GTATTATCGACATGGCAGCGGACAGGGGTCGTTTTATCTGTCAATCACAATCTATGAATT 79586 | || || ||||| || || ||||||| | | | |||||||| |||||| |||| Sbjct 381557 CAGTAATTGATATGGCTGCAGATAGGGGTCCATATGTTTGTCAATCGCAATCTTTGAACA 381616 Query 79587 TGTTTTTAGAGTCACCTACAATTGGAAAAATATCCTCTATGCACATGTATGCGTGGAAGT 79646 | | | || ||| ||| ||| |||| |||||||| | |||| ||||| Sbjct 381617 TTCATATGGAAAATGCTAACTTTGCAAAGTTATCATCTATGCATTTTTATGGTTGGAAAA 381676 Query 79647 CTGGACTCAAGACAGGTATGTACTACTT 79674 || || || ||||| || || || || Sbjct 381677 AAGGTCTAAAAACAGGCATTTATTATTT 381704 >seq4 Length=1026413 Score = 102 bits (112), Expect = 1e-16 Identities = 200/296 (68%), Gaps = 0/296 (0%) Strand=Plus/Minus Query 196454 GATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTT 196513 |||||| || |||| || ||| ||||| |||| | ||| ||||||| |||||| ||| Sbjct 788187 GATCTTTTGTTACTCGACGTTACACCCTTATCTTTAGGTATTGAAACTTTGGGTGGAGTT 788128 Query 196514 ATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCA 196573 | ||| | | ||| | || || || || || || ||||| ||| ||||| || || Sbjct 788127 TTTACTCGATTAATTAACAGAAATACCACAATACCTACTAAAAAGAGCCAAGTATTCTCC 788068 Query 196574 ACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGT 196633 || | | || |||||| | ||| ||| |||| | |||||||| | | Sbjct 788067 ACTGCTGCAGACAATCAAACTCAAGTTGGAATTAAAGTTTTCCAAGGAGAAAGAGAATTT 788008 Query 196634 GCAAAGGATAACCATCTACTTGGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGA 196693 || ||||| | | |||||| || || ||| ||| ||||| | ||||||||| Sbjct 788007 GCTGCTGATAATAAGTTGCTTGGACAATTTGAAATGATGGGAATTCCTCCAGCACCCAGA 787948 Query 196694 GGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAATGGAATTCTAAACGT 196749 || || || || ||| | || ||| ||||| || |||||||||||| | || || Sbjct 787947 GGGGTACCTCAAATTGAAGTCACCTTTGATATTGATGCAAATGGAATTATGAATGT 787892 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657862251980960