Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20parvum_20[genbank_20GCA_5F001306245.1_202015-10- 01] 18 sequences; 9,221,024 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq13 545 2e-149 seq1 251 5e-61 seq4 147 2e-29 seq2 109 4e-18 seq10 105 5e-17 seq9 105 5e-17 >seq13 Length=98922 Score = 545 bits (604), Expect = 2e-149 Identities = 1077/1573 (68%), Gaps = 38/1573 (2%) Strand=Plus/Minus Query 281329 AGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTCCGCGATTATTAGTAAT 281388 ||| || ||| ||| | ||||| | || | || ||||| || || |||||||| Sbjct 4182 AGCATCATTAACCATACGTTCAATATCGTCCTTTGATAATCTACCCTTATCGTTAGTAAT 4123 Query 281389 AGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGAATACCATT 281448 ||| || || || || || |||||| | |||| |||||| | |||||||| Sbjct 4122 AGTGATCTTGCTGCTCTTACCAGTACTCTTATCAACAGCAGACACATTCAAGATACCATT 4063 Query 281449 GGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCC 281508 ||||| | |||||| |||||||||||||| || || ||||| | || ||||| || || Sbjct 4062 AGCATCAATATCAAAGGTGACTTCAATTTGTGGTACACCTCTTGGTGCTGGTGGAATACC 4003 Query 281509 TTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAA 281568 || | || || |||| || || ||||| ||||| | || |||||||| | Sbjct 4002 ATCAAGATGGAACTTTCCGAGGAGATGGTTATCCTTAGTCATGGCTCTCTCACCCTCATA 3943 Query 281569 AATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTC-TGGATTTTT 281627 || |||||| || || | || ||||| | |||||| || || ||| || || || Sbjct 3942 AACTTGGATCAAGACACCACTCTGGTTATCAGCATAAGTAGTGAAGACTTGTGTCTTCTT 3883 Query 281628 TACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGCTGTTTCTA 281687 | | ||| | ||||| || | ||||||| |||||||||| ||||||||| ||||||| Sbjct 3882 TGCTGGGA-TAGTTGTATTACGTTCAATAAGCTTGGTCATAACACCACCAGCAGTTTCTA 3824 Query 281688 AACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTT 281747 |||| || || | |||| ||||| | || | | || || | || | || Sbjct 3823 AACCGAGTGATAATGGAGCAACATCCAATAATAAGAGATCCTGTACGG---CAGAGGATT 3767 Query 281748 GACCAACA---AGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGAT 281804 | || || | ||||| ||||| | |||||||||||| ||||||||||| || |||| Sbjct 3766 GCTCACCATTTAAGATAGCAGCTTGTACAGCAGCACCATAAGCAACAGCTTCGTCTGGAT 3707 Query 281805 TAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATT--TGAAAGAAGTTGTCTTA-CCT 281861 | | | || | | | |||||| || ||| |||| |||| ||| | || | ||| Sbjct 3706 TGATTGCTTTGCATGGCTCTTTACCGTT-AAAGAATTCCTGAATCAAG--GCCTGAACCT 3650 Query 281862 TAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTT 281921 | |||||||| | || || ||||| ||||||| ||||| || | || |||| Sbjct 3649 TTGGAATACGTGTAGAACCACCAACCAATACAACATCATGTACAGATCTCTTGTCCATAC 3590 Query 281922 TTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTGAACAAA 281981 | |||| | ||||| ||||| || | | | || | || | || | || | Sbjct 3589 CAGCATCCTTGAGTACTTTCTCAACTGGAGCTAAAGTTGCACGGAAGTAATCAGCGCAGA 3530 Query 281982 GTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAACAAAGAAT 282041 ||||||||||| |||||||| | | | || ||||||||| ||||| | | |||| Sbjct 3529 GTTCTTCGAATCTAGCTCTACTGATGGCAACTGAATAATCAATACCTTCATAGAGTGAAT 3470 Query 282042 CAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTG 282101 | | ||||| |||| |||||| ||||| || | | | || ||||| || ||| | Sbjct 3469 CTAACTCAATTGTAGCTTGAGTAGAAGATGACAAAGTTCTCTTTGCACGCTCGCATTGAG 3410 Query 282102 TCCTTAGTCTTCGTAAGGCTTTTGCTGAT-TGATTCAAATCTGT---TTTATATTTTCTC 282157 | || ||||||| ||| ||| | || | || || ||||| | | ||| |||||| Sbjct 3409 TTCTGAGTCTTCTTAAAGCTCTAGCATTTGTGGTT-AAATCCATACCTCTATTCTTTCTC 3351 Query 282158 TTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTA 282217 |||||||||| ||||| || ||| || | ||||||||||||||||| ||||| | | Sbjct 3350 TTGAAATCTTGTACACAGAATTCTACGAGTCTGTTATCAAAATCTTCACCACCCAAGTGA 3291 Query 282218 GTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACA 282277 |||| || | |||||| | |||| |||| |||||||||| || || | | ||| Sbjct 3290 GTATCACCAGCGGTAGCTTTAACTTCAAAAATACCATCTTCAATAGTTAATAATGATACA 3231 Query 282278 TCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTC--TTGGTTT- 282334 ||| || |||||||| | ||| || || | |||||| | || | | || ||| Sbjct 3230 TCAAAAGTACCACCACCTAAATCGAAGATCAATACATTTCTCTC---GCCAGTTCCTTTC 3174 Query 282335 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 282394 |||||||||||||| |||| |||||| |||||||| || ||||| ||||||| ||||| Sbjct 3173 TTATCAAGACCATAAGCAATAGCAGCTGCAGTTGGCTCGTTAATGATTCTCATTACATTC 3114 Query 282395 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 282454 | |||||||||| |||||||| || || ||||| | ||||| || || ||||| || Sbjct 3113 AAACCAGCAATTGCACCTGCATCCTTTGTTGCTTGACGCTGTGAGTCATTGAAATAAGCT 3054 Query 282455 GGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAG--CGCTT--GCTGTTTG 282510 |||||||||| || || ||| | ||| | | ||| |||| | | | Sbjct 3053 GGAACAGTAACTACAGC----GTTCTTAATTTGGCGACCCAAGTATGCTTCAGAGATCTC 2998 Query 282511 TTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTGCTTGGATTCATT 282570 ||||| || ||||| ||| | ||||||| ||| | | ||| ||| |||| Sbjct 2997 CTTCATCTTTTGTAAAACCATAGCAGAAATTTCTTCAGCATGGAATTCCTTCTTTTCACC 2938 Query 282571 TTGATATGATAC-TTCAAAATATGGTTT---ATTACCAACATTAATAACTTTAAATGGCC 282626 | || ||| | | || ||| || || | | ||| ||||||||||||| Sbjct 2937 TAAGTAGTTTACACTGATGAT-TGGCTTGTCCTTTGGACCTCTAACTACTTTAAATGGCC 2879 Query 282627 AATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTG 282686 | | ||||||| ||| || || |||| ||| | ||||||||| | ||||| | Sbjct 2878 AGTGAGTCATATCACTTTGTACTGCCTGATCATCAAACTTTCTACCAATAAGACGTTTAG 2819 Query 282687 CATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCA 282746 ||||||||| ||||| ||| || ||| |||| | || |||||||| ||||| | Sbjct 2818 CATCAAAAACTGTATTTTCTGGGTTTCTAGCAACTTGGTTCTTTGCTGCATCACCAATAA 2759 Query 282747 GATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCG 282806 || | || || |||||||||| ||||||||||| ||||| || ||||||||||| || | Sbjct 2758 GACGCTCAGTTTCTGTAAATGCTACATATGATGGTGTTGTACGGTTACCTTGATCGTTTG 2699 Query 282807 CAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAAT 282866 || ||| || || || | ||| ||||||||| ||||| | || || ||||||| Sbjct 2698 GAACAATATCTACAGTATCGTTTCTCCATACACCAACACATGAGTATGTGGTACCTAAAT 2639 Query 282867 CAATACCAATAGC 282879 ||||||||||||| Sbjct 2638 CAATACCAATAGC 2626 Score = 96.9 bits (106), Expect = 3e-14 Identities = 203/300 (68%), Gaps = 17/300 (6%) Strand=Plus/Minus Query 85960 TCAAAATCTTCTCCTCCCAAATGTGTATTACCACCTACTGCCA-ATGTTCTAAATACTCC 86018 ||||||||||| || ||||| || |||| |||| | || | ||| ||| | || Sbjct 3314 TCAAAATCTTCACCACCCAAGTGAGTATCACCAGCGGTAGCTTTAACTTCAAAA-ATACC 3256 Query 86019 ATTTGAGATATTCATTAACGAAACATCTAATGTCCCAGCTCCTAAGTCATAAACAATTAC 86078 || | ||| | | ||| || ||||| || || ||| | ||||| || | | | ||| Sbjct 3255 ATCTTCAATAGTTAATAATGATACATCAAAAGTACCACCACCTAAATCGAAGATCAATAC 3196 Query 86079 GTTAC---CACCAGtttttttATTCCATTTTTCACTTCCTAAACCGTATGCAAGAGCTGC 86135 || | | |||||| ||| || ||| | ||| || |||| ||| || Sbjct 3195 ATTTCTCTCGCCAGTTCCTTTCTTA------TCA------AGACCATAAGCAATAGCAGC 3148 Query 86136 TGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCAATTTTAGCAGAATCAAG 86195 ||||||||| || ||||| ||| | | |||| ||||| |||||| | | | ||| Sbjct 3147 TGCAGTTGGCTCGTTAATGATTCTCATTACATTCAAACCAGCAATTGCACCTGCATCCTT 3088 Query 86196 AGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTAATAACTGCTTTATTAAT 86255 |||||||| | ||||| |||||| ||||| ||||| ||||||| || || || ||||| Sbjct 3087 TGTTGCTTGACGCTGTGAGTCATTGAAATAAGCTGGAACAGTAACTACAGCGTTCTTAAT 3028 >seq1 Length=1295191 Score = 251 bits (278), Expect = 5e-61 Identities = 1024/1587 (65%), Gaps = 45/1587 (3%) Strand=Plus/Minus Query 281306 TTATCTGCTTCTTCAAATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAG 281365 || ||| |||| |||||| | ||| || ||||||| | ||| || | || | ||| Sbjct 81532 TTGTCTTCTTCGGCAAATTGCTCAGCCTCCTTAATCATACGCTCTATGTCTTCCTGTGAG 81473 Query 281366 AATCTTCCGCGATTATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCG 281425 | ||| || || ||| || |||||||| |||| ||||| || ||||| Sbjct 81472 AGTCTACCCTTATCATTTGTGATAGTAATCTTCTCAGATTTACCAGTACCCTTATCCTTT 81413 Query 281426 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 281485 ||| | || | | |||||||| | ||| | ||||| || || |||||||| || || Sbjct 81412 GCACTAACTTGTAAAATACCATCAGTATCAATTTCAAAAGTAACCTCAATTTGGGGAACA 81353 Query 281486 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTA 281545 ||||| |||| |||||||| || | | ||| |||| || ||| ||||| ||| Sbjct 81352 CCTCTTGGAGCTGGTGGGATTCCAGAAAGCTCGAATTTTCCAAGGAGATTGTTATCCTTA 81293 Query 281546 GTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTT---TGATTATCTGAA 281602 || | | || |||||||| ||| |||||| | ||||| | ||||||||| Sbjct 81292 GTCATTGGACGCTCACCCTCATAAACCTGGATA---AGTACAGCTGGCTGATTATCTTGG 81236 Query 281603 TAAGTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAATAATATT 281661 ||||| | || ||| ||| | || || |||| ||||||||| |||| | || Sbjct 81235 TAAGTACTGAAAACT-TGGCTCTTCTTGGTTGGAACAACAGTGTTTCTACCAATGAGCTT 81177 Query 281662 GGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGAC 281721 ||||||| |||||| | || || | ||| | || | |||||| ||||| | || Sbjct 81176 TGTCATAACTCCACCAACAGTCTCAATACCTAAAGTTAAAGGAGTAACATCCAATA---- 81121 Query 281722 AATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACC 281781 ||| | || | | | | || ||| | | ||| | ||||| | |||||||| Sbjct 81120 -ATAAT---AAATCACT-ACCGCCTTCACCTGCTAAGATACCAGCTTGTACGGCAGCACC 81066 Query 281782 ATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT- 281840 ||| || || |||||||| || |||| | ||| | | || |||| || || | Sbjct 81065 ATAAGCGACGGCTTCATCTGGGTTAATTCCTCTGTTTGGCTCCTTTCCATCAAAGAACTC 81006 Query 281841 -TTGAAAGAAG-TTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTC 281898 |||| | | ||| | |||||| ||||||| || || ||||| || || || || Sbjct 81005 CTTGATCAAGGCTTGAAT---CTTAGGGATACGAGTAGAACCACCAACCAAAACGATCTC 80949 Query 281899 ATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACC 281958 || || | || || | | | | |||| ||||| || | ||| || || | | Sbjct 80948 ATCTACTTCAGACTTTTTGATTCCAGCATCCTCCAAAACCTTCTTAACTGGCTCGATAGT 80889 Query 281959 AGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATA 282018 ||| |||||||| | | | || |||||||||||||| || | || | | | Sbjct 80888 CTTTCTGAACAAGTCAGCATTCAACTCATCGAATTTAGCTCTGGTCAAGGTTTCGCTCAA 80829 Query 282019 ATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGC 282078 ||| | | || | |||| |||| || | | || ||| | | ||||| || || Sbjct 80828 ATCTACATCCTCCATCAAACCTTCAATCTCGACCTTAACTTGTGGAGCTGAAGAAAGAGC 80769 Query 282079 ACGTTTAGCACGT-TC-ACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGA-TT 282135 | || | || | || || | || |||| || |||| |||| | | || || || Sbjct 80768 TCTCTTTG-ACTTCTCGACCT-CTCTCCTAAG-CTTCTGAAGGGCTCTCTTGTCAGACTT 80712 Query 282136 CAAATCTGTTTTATAT-TTTCTCTTGAA-ATCTTCAACACACCATGTTACAAGACGATT- 282192 | ||| ||| | | ||| ||||| ||||| | | || | || || | Sbjct 80711 TACATCC-TTTCCTGTCTTTGACTTGATGATCTTGATAAAG---TGGTCCATAACTCTCT 80656 Query 282193 -ATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTC 282251 ||| ||||| ||||||||||| | |||| || ||||| || | ||||| | Sbjct 80655 GATCGAAATCCTCACCTCCCAAATGGGTATCACCACTTGTAGCAACGACCTCGAAAACAC 80596 Query 282252 CATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTA 282311 | | |||| | ||| |||| ||||||| || |||||||||| ||| | | | | Sbjct 80595 CGTTATCAATGGTCAAGAGAGAAACATCAAAAGTACCACCACCCAAATCGTATACTA--A 80538 Query 282312 CATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTT 282371 || | |||| | ||| || || | |||| | |||| || || || ||||| | Sbjct 80537 AATGCTCTTCTCAGCCTTC----TTGTCCAAACCAAAAGCAATTGCTGCTGCTGTTGGCT 80482 Query 282372 CATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTC 282431 |||||||||| | | ||||| | ||| ||||| || ||||| || || || || | Sbjct 80481 CATTAATAATACGAATTACATTCAAACCGGCAATAGCACCAGCATCCTTGGTAGCCTGAC 80422 Query 282432 TTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAA 282491 || | ||| ||||| || || || ||||||||||| |||| ||||||| || || | Sbjct 80421 GCTGAGCATCATTAAAGTAAGCTGGGACAGTAATAACTGCATGCTTTACTTCCTTACCGA 80362 Query 282492 TATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAG 282551 |||||| || ||| ||||| || || | ||| | ||||| | |||||| | Sbjct 80361 GATAAGCCTCAGCAATTTCCTTCATCTTGACCAAGACCATAGCTGAAACCTCTTCTGGGG 80302 Query 282552 AATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAA 282611 ||||||| ||| | | || |||| | || || || || | |||| Sbjct 80301 CTAATTGCTTCTTCTCACCCTTAACAGAAACTTGTATGTAAGGCTTGCTATCTTTGTTAA 80242 Query 282612 TAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTAC 282671 ||| | | |||| | || |||| ||| || | || ||||| | || Sbjct 80241 TAATCTCATATGGTAGCAAAGTCTTATCCTTTTGGACGGAATCATCCTTAAAGCGACGAC 80182 Query 282672 CAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGG 282731 |||| | || ||| |||| || | ||| | |||||| | | |||||||| |||| Sbjct 80181 CAATAAGTCTCTTTACATCGAACAAAGTCTGAACTGGATTGATAGTAGCTTGATTCTTGG 80122 Query 282732 CTGCATCTCCAATCAGATGTTCTGTC-TCTGTAAATGAAACATATGATGGAGTTGTGCGA 282790 ||| || ||||||| || | || || || ||||| ||||||||||| || | ||| Sbjct 80121 CTGATTCACCAATCA-ATCTCTCATCATCAGTGAATGATACATATGATGGTGTAATACGA 80063 Query 282791 TTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTA 282850 |||||||| ||||| | |||||| || ||| ||||||| | | | ||| ||||| | Sbjct 80062 TTACCTTGTTCATTTGGAATAATCTCTACTCTACCATTCTTGTAGATACCAACACATGAA 80003 Query 282851 AAAGTTGTTCCTAAATCAATACCAATA 282877 |||| || |||||||| ||||||||| Sbjct 80002 TAAGTAGTACCTAAATCGATACCAATA 79976 >seq4 Length=1026413 Score = 147 bits (162), Expect = 2e-29 Identities = 336/493 (68%), Gaps = 27/493 (5%) Strand=Plus/Plus Query 281322 ATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTCCGCGATTAT 281381 |||||| ||||||||| |||||| ||||||||| | | || | | ||| || || Sbjct 787785 ATTCTTCAGCTTCTCTGATCATTTTCTCAATTTCAGCACCACTTAGACCTCCA-GAAGAT 787843 Query 281382 TAGTAATAGTAATATTCTTGGATTTGTTT---GTTGATTTATCAGCGGCAGTCACATTAA 281438 | |||||| || | | || ||| ||| ||||| |||||| ||| ||||| | Sbjct 787844 TG--AATAGTGATCT-CGTG--TTTCTTTCCAGTTGACTTATCAATTGCACCAACATTCA 787898 Query 281439 GAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAG 281498 ||| ||||| ||||| | |||||| ||||||||||||||||| |||||||| | || | Sbjct 787899 TAATTCCATTTGCATCAATATCAAAGGTGACTTCAATTTGAGGTACCCCTCTGGGTGCTG 787958 Query 281499 GTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTT 281558 | || || || || | |||| ||| || |||||||| || |||| || || Sbjct 787959 GAGGAATTCCCATCATTTCAAATTGTCCAAGCAACTTATTATCAGCAGCAAATTCTCTTT 788018 Query 281559 CACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTC 281618 | || | ||||| || || |||| ||||||||| |||| | ||| | |||||| Sbjct 788019 CTCCTTGGAAAACTTTAATTCCAACTTGAGTTTGATTGTCTGCAGCAGTGGAGAATACT- 788077 Query 281619 TGGAT-TTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTG-GTCATAATACCACC 281676 ||| | |||||| ||| ||||| || ||||| | ||| | || | || | || ||||| Sbjct 788078 TGGCTCTTTTTAGTAGGTATTGTGGTATTTCTGTTAATTA-ATCGAGTAAAAACTCCACC 788136 Query 281677 AGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT-TTTGAAGTT 281735 ||||| | ||| | ||| | || || || || | || | || || |||| Sbjct 788137 CAAAGTTTCAATACCTAAAGATAAGGGTGTAACGTCGAGTAACAAAAGATCCTTGA---- 788192 Query 281736 TTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTT 281795 || | ||| ||| || | | ||||| |||||||| || ||||||||||| Sbjct 788193 --TCTCCCCTTT---CAA----AACACCAGCTTGTATAGCAGCTCCCATTGCAACAGCTT 788243 Query 281796 CATCAGGATTAAC 281808 | ||||| ||||| Sbjct 788244 CGTCAGGGTTAAC 788256 Score = 100 bits (110), Expect = 2e-15 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 282344 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 282403 || || |||| ||| || || ||||| |||||||| ||||| ||||| | || || Sbjct 788795 CCGTATGCAAGAGCTGCTGCTGTTGGCTCATTAATGATTCTTGTTACATTTAAGCCTGCT 788854 Query 282404 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 282463 || || ||||| ||||| ||||| | || ||||| ||||| || || || |||||| Sbjct 788855 ATAGAGCCAGCATCCTTAGTTGCTTGACGCTGAGAATCATTAAAGTAAGCTGGCACAGTA 788914 Query 282464 ATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTT 282523 ||||| |||| |||| || | |||| ||||| || |||| ||||||||| Sbjct 788915 ATAACAGCATGCTTTACACCTCTACCAAGATAAGTTTCGGCAGTTTCTTTCATTTTTTCC 788974 Query 282524 AAAATCATTGATGAAATTTGTTCTGGAGAATAT 282556 ||||| | || | |||||| |||| |||| Sbjct 788975 AAAATAAATGCTCCAATTTGACTTGGACTATAT 789007 Score = 96.9 bits (106), Expect = 3e-14 Identities = 98/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 86119 CCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCA 86178 |||||||||||||||||||| ||||| |||||||| ||| | |||| ||| || || Sbjct 788795 CCGTATGCAAGAGCTGCTGCTGTTGGCTCATTAATGATTCTTGTTACATTTAAGCCTGCT 788854 Query 86179 ATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTA 86238 || ||| ||| ||||||||| | ||| | |||||||| || ||||| |||||| Sbjct 788855 ATAGAGCCAGCATCCTTAGTTGCTTGACGCTGAGAATCATTAAAGTAAGCTGGCACAGTA 788914 Query 86239 ATAACTGC 86246 ||||| || Sbjct 788915 ATAACAGC 788922 >seq2 Length=1238148 Score = 109 bits (120), Expect = 4e-18 Identities = 295/441 (67%), Gaps = 14/441 (3%) Strand=Plus/Plus Query 161051 TCGAATGGATTATCAACATTGAAT-TTTTTGCGATAACCAAGATCTACAAGTAATCTGTC 161109 || || |||||| ||| ||| | |||||| ||| ||||| | | ||||||||| || Sbjct 86783 TCAAAAGGATTAGAAACGTTGTAGATTTTTGGAATATCCAAGG-CAAAAAGTAATCTATC 86841 Query 161110 AGCAACATATTTAATATATTGAGACATTAGTTCAGAATTCATACCAAGAAGTTTACACGG 161169 ||||||| ||| ||||||||| | ||| ||| ||||||||||||| ||| | | || Sbjct 86842 AGCAACAAATTCAATATATTGGGCCATAAGTCTCGAATTCATACCAATAAGATCAACAGG 86901 Query 161170 AAGAGAATCATTAATAAATTCTTCTTCAATTTCAATCGCTTCGTCAATAATTTGGTAAAC 161229 |||||| ||| || ||| | | ||||| ||||| ||||| || ||||| | || Sbjct 86902 AAGAGAGTCACAAAGAAAGTTTCTTTCAACTTCAACAGCTTCTGATATGATTTGTTGTAC 86961 Query 161230 AACAGATTCTTTCAAACGATTATTCAACAATGAATACATAATACAAGCAAGTTCTACATG 161289 || || || | || | | ||| || | |||||||| || |||| Sbjct 86962 TCTAGGAGCTGGTAATTTAAATTTAAGGGCTTTATATATTAAACAAGCAAAATCAGCATG 87021 Query 161290 TTTGTTTTCATCACGAGCAATAAATTGATTTGATATAATTAGACCAGGCATTACATGCAT 161349 |||||||||| ||||| || ||| || | | || ||||||| || | || Sbjct 87022 GAGACCTTCATCACGACTAATAAGTTCATTAGAAAATGTGAGTCCAGGCA-TAAGTCCAC 87080 Query 161350 TTCTCTAGTTTTTAA-CCAGAAAATCGAAGCAAATGAT-CCACTAAAGAAAACGCCTTCT 161407 | ||||||| ||| ||||| | | |||| | | ||| ||| | || ||||| Sbjct 87081 GT------TTTTTAAGCCAAAAAATTGCA-CAAAAGCTACCAGAAAATAGAATTCCTTCA 87133 Query 161408 ACAATAGAGAATGCTACTAATT-TGTGAGCATATGTCTTATCAGATTTAATCCATTTATT 161466 ||| | ||||| | | ||||| | | |||| | | ||||| || ||||||||| | Sbjct 87134 ACAGCACAGAAT-CCAATAATTCTTTCAGCAAAAGATCGCTCAGAATTCATCCATTTAGT 87192 Query 161467 ACACCAATCAGCTTTCTTTTT 161487 ||| || ||||||||||| Sbjct 87193 TGCCCATTCTGCTTTCTTTTT 87213 >seq10 Length=200410 Score = 105 bits (116), Expect = 5e-17 Identities = 134/183 (73%), Gaps = 1/183 (1%) Strand=Plus/Plus Query 637117 AAAATTATTGTCGATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATTGGACATTTA 637176 ||| | ||||| |||| || || ||||| ||||| |||||||||||| ||||||| ||| Sbjct 161614 AAAGTAATTGTAGATTTCTCATCACCAAACATTGCCAAAGAAATGCATGTTGGACACTTA 161673 Query 637177 AGATCAACTATTATTGGTGAATCTATTTGTAGGGTATTAGAAATGTGTGGACACGATGTT 637236 ||||| || ||||||||||| | | ||||| | | ||| | ||| || || Sbjct 161674 AGATCTACAATTATTGGTGATACAACATGTAGAATTCTTGAATATTTAGGATTTGAAGTA 161733 Query 637237 TATCGTATTAATCATGTGGGTGATTGGGGAACTCAATTCGGTATGTTAATTGCTTATATT 637296 | | ||||||| || || |||||||| |||||||| || ||| | |||| ||| || Sbjct 161734 TTAAGAGTTAATCACGTTGGAGATTGGGGTACTCAATTTGGCATGCTTATTGAATAT-TT 161792 Query 637297 AAA 637299 ||| Sbjct 161793 AAA 161795 >seq9 Length=379940 Score = 105 bits (116), Expect = 5e-17 Identities = 331/503 (66%), Gaps = 15/503 (3%) Strand=Plus/Plus Query 401131 TATTATGATTTCATTCACAAAGAACTTATTACTTTTTCTGTGGATGACGTTCT--TAGAT 401188 |||| |||||| ||||| ||||||||| | || || || ||| | || ||||| Sbjct 191422 TATTTTGATTTTATTCATAAAGAACTTGTA--TTATTTAGTAGATATGATACTACTAGAT 191479 Query 401189 CTGTTCCTAATTTAATGGATGGATTTAAACCATCACATCGCAAAGTATTTTATGGTTCTG 401248 || |||| |||||| | ||||| || ||||| ||| | |||||| ||| || | Sbjct 191480 CTATTCCAAATTTATTAGATGGTTTAAAACCTGGACAAAGAAAAGTACTTTTTGCAACAT 191539 Query 401249 TTGAAAAGAATATTTATAAGCAAGAGATTAAAGTATCAGATTTGACTGGTTTTGTCTC-G 401307 || |||| || || |||| || ||||||| || | || |||||| ||| | | Sbjct 191540 TTAAAAAAAAGCTTAATAATGAAC---TTAAAGTTGCACAATTAGCTGGTTATGTTGCTG 191596 Query 401308 AATATGACGAAATATCATCATGGTGATCAATCATTATCATCAACTATTGTCGGAATGGCT 401367 || || | ||||||||||| || |||||| | |||||||| |||||| Sbjct 191597 AACATAGTGCT-TATCATCATGGAGAATCATCATTGCAAAGTACTATTGTTAATATGGCT 191655 Query 401368 CAAAATTATGTGGGAAGTAACAATCTCAATTTGTTAATGCCATTGGGAATGTTTGGATCT 401427 ||||||| ||| |||||||| ||||| ||| | ||| |||| || ||||| | Sbjct 191656 CAAAATTTTGTTGGAAGTAATAATCTAAATCTATTAGAACCATGTGGTCAATTTGGTAGT 191715 Query 401428 AGATTGACCGGAGGTAAAGATTCAGCGAGTCCTAGGTATTTGAACACTAAATTAGATGAT 401487 ||| || || |||||| || | || | ||| | ||||| || | | Sbjct 191716 AGAAAAGAAGGTGGAAAAGATGCAAGTGCTGCTCGTTATATATTTACTAAGCTATCTAAA 191775 Query 401488 TTGGCAAAGAAAATCTTCATTGATTATGATTTTGATATTCTTCAACATCAGTCAGAAGAT 401547 | | | | | || ||| || |||| | | || || ||| | | | | | ||| Sbjct 191776 TGGACTAGATATATTTTCCCAGAGGCTGATGATCCT-TTATT-AAC-TTATTTATATGAT 191832 Query 401548 AATTG---TCGAATTGAACCTGTTTATTATGCTCCTATTATTCCAATGATACTTGTAAAT 401604 || | | |||||||||| | ||||| | ||| || ||||||||||| | |||||| Sbjct 191833 GATGGACAACAAATTGAACCTTTATATTACGTTCCAATAATTCCAATGATTTTGGTAAAT 191892 Query 401605 GGAGCTGAAGGAATTGGTACTGG 401627 || |||| ||||||||||| || Sbjct 191893 GGTACTGATGGAATTGGTACAGG 191915 Score = 98.7 bits (108), Expect = 7e-15 Identities = 223/340 (66%), Gaps = 33/340 (10%) Strand=Plus/Plus Query 399172 ATTACTTATGTACCTGGTCTATATAAAATTTATGATGAAGTAATTGTAAATGCGGCAGAT 399231 |||| ||||||||||||| ||||||| |||| ||||||| | | || ||||| || ||| Sbjct 189223 ATTAATTATGTACCTGGTTTATATAAGATTTTTGATGAAATCTTAGTTAATGCTGCTGAT 189282 Query 399232 CATAA--CAAGAGA-------------------------TGTCAAACATGTAATATTATC 399264 ||| | ||||| | | ||| ||||| | ||| Sbjct 189283 GTTAAAGCTAGAGAAATTTCAACTAAAAATAATCATATTTTTGAAAAATGTACTTGTATT 189342 Query 399265 AAAGTTGATATCGATC---AAAAAACAGGTCAAATTTCTGTTTGGAATAATGGTGATGGT 399321 |||||||| || || |||||| || ||||| |||| | ||| |||| || || Sbjct 189343 AAAGTTGAAATTAATAGAGAAAAAAAAG---AAATTACTGTATTTAATGATGGAGAAGGA 189399 Query 399322 ATTGATGTAGCAATTCATAAAGAACATAATATATGGGTACCATCAATGATTTTTGGAGAA 399381 || | | ||| |||| ||||||| | ||| || ||| | | ||||||||| | Sbjct 189400 ATACCAATTGAAATACATAGAGAACATCAAGTATATGTTCCAGAATTAATTTTTGGACAT 189459 Query 399382 CTTTTAACGTCTACTAATTACGATAAAAACGAGGAAAAAACTGTTGGTGGTAAAAATGGT 399441 | ||||| ||| |||||| ||| | || || || | | | ||| || | ||||||| Sbjct 189460 TTATTAACTTCTGATAATTATGATGATAATGAAGATAGAGTTACTGGAGGAAGAAATGGT 189519 Query 399442 TTTGGCGCTAAGCTTGCTAATATTTATTCTGTTGAATTTA 399481 ||||| || || ||| ||||||| | ||| ||||||| Sbjct 189520 TTTGGAGCAAAACTTACTAATATATTCTCTAAAGAATTTA 189559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740629516276068