Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20parvum_20[genbank_20GCA_5F002093595.1_202017-04- 14] 1,076 sequences; 9,111,587 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq132 109 6e-19 >seq132 Length=18305 Score = 109 bits (120), Expect = 6e-19 Identities = 271/399 (68%), Gaps = 22/399 (6%) Strand=Plus/Plus Query 16674 TTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCT 16733 |||| || || | ||| | |||||||| ||||||||||| || | || || ||| | Sbjct 12942 TTTGATATTCACCAACTCTCTTTTCGAAGAAGTTAGTTTTACCTTGAAGTGAAATAAGGT 13001 Query 16734 CCATGAAATCAAAAGGATTAGTA--GCTGAAAATATTTTAGAGTACCCCAGTTCGGCGAT 16791 |||| ||||||||||||||| | | || | || |||| || || || || | | Sbjct 13002 CCATCCAATCAAAAGGATTAGAAACGTTGTAGAT-TTTTGGAATATCCAAG-GCAAAAAG 13059 Query 16792 TAATCTATCCGCTACAAATTCTATATATTGGCACATTAAT-TCGCAGTTCATTCCTATAA 16850 ||||||||| || |||||||| ||||||||| ||| | | ||| | ||||| || |||| Sbjct 13060 TAATCTATCAGCAACAAATTCAATATATTGGGCCATAAGTCTCG-AATTCATACCAATAA 13118 Query 16851 GACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGC--TCTATAACAACCGCTTCCTTAAT 16908 || || ||||||| || |||| | ||| | || | |||| ||||| | || Sbjct 13119 GATCAACAGGAAGAGAGTC--ACAAAGAAAGTTTCTTTCAACTTCAACAGCTTC--TGAT 13174 Query 16909 AATACTAGCAACTCGTTC-CTCGGA-CGG----TGTATGTTTAAGATGTTTAAACATCAG 16962 | | | | | || | || ||| | | | || |||||| |||| | || | Sbjct 13175 ATGATTTG----TTGTACTCTAGGAGCTGGTAATTTAAATTTAAGGGCTTTATATATTAA 13230 Query 16963 ACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAA 17022 ||| || ||||| ||| | || || || | || |||||||| ||||||||||| | Sbjct 13231 ACAAGCAAAATCAGCATGGAGACCTTCATCACGACTAATAAGTTCATTAGAAAATGTGAG 13290 Query 17023 CCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGC 17061 || ||||| ||| ||||| || | |||||| || || Sbjct 13291 TCCAGGCATAAGTCCACGTTTTTTAAGCCAAAAAATTGC 13329 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517538639011680