Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20parvum_20[genbank_20GCA_5F002093595.1_202017-04- 14] 1,076 sequences; 9,111,587 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq145 242 1e-58 seq533 163 1e-34 seq245 140 1e-27 seq662 125 3e-23 seq739 120 1e-21 seq332 120 1e-21 seq151 109 2e-18 seq364 107 8e-18 seq446 89.7 2e-12 seq257 87.8 7e-12 >seq145 Length=38051 Score = 242 bits (268), Expect = 1e-58 Identities = 481/701 (69%), Gaps = 16/701 (2%) Strand=Plus/Minus Query 450913 AGCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAA 450972 ||| ||||| |||||| | || ||||| | |||||||| ||||| | ||| | | Sbjct 14768 AGCTATTGGTATTGATTTAGGTACCACATACTCATGTGTTGGTGTATGGAGAAACGATAC 14709 Query 450973 TGTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTAC 451032 |||||| ||| | |||| || ||||| || || || || |||| ||| ||||| Sbjct 14708 TGTAGATATTGTTCCAAACGATCAAGGTAACCGTACAACACCATCATATGTAGCATTTAC 14649 Query 451033 GGATTCAGAAAGACTTTTAGGGCAAGCTGCTAA--ATCAATGGTAAATTCAAATGCCAAA 451090 || | || | ||| | || | || || || | ||| || | ||| | || Sbjct 14648 AGAAACTGAGCGTCTTATTGGTGATGCAGCAAAGAACCAA--GTTGCTAGAAACCCAGAA 14591 Query 451091 AACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAA 451150 || ||||| | ||||||||||||| | ||||| | | || ||||||| | | |||||| Sbjct 14590 AATACAGTTTTTGATGCTAAACGTCTTATTGGTAGAAAGTTTGATGATCAGGCAGTACAA 14531 Query 451151 AAAGAGAAAAAATTCTTTTCTTATGATGTAGTAAA---TCAAAAAGGAAAGCCCTATATT 451207 | || | | || | | | | ||||| | || ||| | ||||| || | Sbjct 14530 AGTGATATGACTCACTGGCCATTTAAAGTAGTTAGAGGTCCAAAGGACAAGCCA-ATCAT 14472 Query 451208 CAA-GTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGT 451266 || ||||| || |||||||| || || | ||||||||||||| ||||||| Sbjct 14471 CAGTGTAAACTACTTAGGTGAAAAGAAGGAATTCCATGCTGAAGAAATTTCTGCTATGGT 14412 Query 451267 TCTTACTAAA-ATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAG-TTACTGATGCA 451324 | |||| ||| ||||| || | | ||| ||| |||| || ||| ||| | || Sbjct 14411 T-TTACAAAAGATGAAGGAGATCTCTGAAGCATAC-TTGGGTCGCCAAATTAAGAACGCT 14354 Query 451325 GTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGA 451384 ||| |||||||||| |||||||||||||| |||| || |||||||| || |||||||| Sbjct 14353 GTAGTTACTGTTCCAGCTTATTTCAATGACTCACAGCGTCAAGCAACAAAGGATGCAGGT 14294 Query 451385 CATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCA 451444 ||||||||||| ||||| | |||| ||||| || || || ||||||||| | || Sbjct 14293 GCAATTGCTGGTTTGAATGTAATGAGAATCATTAACGAGCCAACTGCAGCTGCTATTGCT 14234 Query 451445 TATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGT 451504 ||||| || | || |||| ||| | || | |||| | || | || ||||| ||| Sbjct 14233 TATGGTCTTGATAA---GAAAGGAACTGGCGAGAGAAATGTATTGATCTTCGATTTAGGT 14177 Query 451505 GGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCA 451564 || || ||| |||| || || | | ||||||||||| | |||||||| || || Sbjct 14176 GGTGGTACTTTTGATGTATCATTATTAACTATTGAAGATGGTATTTTTGAAGTTAAAGCT 14117 Query 451565 ACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 ||| |||||||||||| | || ||||||||| ||||||| Sbjct 14116 ACCGCTGGTGATACTCACTTGGGTGGTGAAGATTTTGATAA 14076 >seq533 Length=19963 Score = 163 bits (180), Expect = 1e-34 Identities = 454/690 (66%), Gaps = 15/690 (2%) Strand=Plus/Plus Query 450917 ATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAATGTA 450976 ||||| || ||| | || || || | ||||||||| ||| | ||| | ||||| | ||| Sbjct 11857 ATTGGTATCGATTTAGGTACTACTTATTCATGTGTTGGTATCTACAAGAATGGTAGAGTA 11916 Query 450977 GAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTACGGAT 451036 || ||||| ||||||| ||||| || | ||| || |||| ||| || || ||| Sbjct 11917 GAGATTATTCCAAATGAACAAGGTAATCGTATTACACCATCATATGTATCATTCACTGAT 11976 Query 451037 TCAGAAAGACTTTTAGGGCAAGCTGCTAA--ATCAATGGTAAATTCAAATGCCAAAAACA 451094 || ||| | | || || | || || ||||| | || |||| | | | | Sbjct 11977 GATGAGAGATTGATTGGTGAATCAGCCAAGAATCAA-GCTACTATCAA-TCCAGTTCAGA 12034 Query 451095 CAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAAAAAG 451154 | | | |||| || | | ||||| ||| | | | |||||| | || ||||| | Sbjct 12035 CTTTGTTCGATGTAAAGAGACTTATTGGTCGTCGCTTTAAGGATGATTCCGTCCAAAAGG 12094 Query 451155 AGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTCAAGTAA 451214 | || | || | | ||||| | | || || | | ||||| || || ||||| Sbjct 12095 ATAAGACTTTGCTACCATATGAGATTATTAACAAAGATAGCAAGCCTTACATACAAGTTT 12154 Query 451215 ATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTA 451274 | ||| ||||| | || || || || ||||| ||||| ||||||| ||| | Sbjct 12155 CTGTTAAGGGTGAGAAGAAGCAATTAGCCCCAGAAGAGGTTTCAGCTATGGT-CTTGGTC 12213 Query 451275 AA-ATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACT 451333 || ||||| |||| || || ||| | ||| ||| | ||||||| |||||| Sbjct 12214 AAGATGAAGGAAATTGCTGAGGCTTATCTCGGTAAGGAAGTAAAGCATGCAGTTATTACT 12273 Query 451334 GTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCT 451393 || || ||||| || |||||||| || || || || || || ||||| || |||||| Sbjct 12274 GTCCCAGCTTACTTTAATGATGCTCAGCGTCAGGCTACCAAGGATGCTGGTGCTATTGCC 12333 Query 451394 GGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTA 451453 ||||| ||||| |||| ||||||||||| || |||||||| || | || | ||| | Sbjct 12334 GGTTTGAATGTAATTCGTATTATTAATGAGCCAACAGCAGCAGCAATTGCTTTTGGTTTG 12393 Query 451454 GGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACT 451513 | | ||||| | || || | |||||||||| ||||| ||||| || ||| Sbjct 12394 G-------ACAAGAA--GGCTGAGAAGAGCATTTTAGTATACGATTTGGGTGGTGGTACT 12444 Query 451514 CATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGT 451573 |||| |||| | | | ||||| | || || || || || || || | |||| Sbjct 12445 TTTGATGTTTCTCTCTTGACCATTGATAACGGTGTTTTCGAGGTCGTTGCTACAAGTGGT 12504 Query 451574 GATACTCATCTAGGAGGTGAAGATATTGAT 451603 ||||| ||| | |||||||| ||| | ||| Sbjct 12505 GATACCCATTTGGGAGGTGAGGATTTCGAT 12534 >seq245 Length=10549 Score = 140 bits (154), Expect = 1e-27 Identities = 299/443 (67%), Gaps = 9/443 (2%) Strand=Plus/Plus Query 364565 TATTCCATCTTTAGTTGATGGATTTAAACCTTCTCAAAGAAAAATTTTTTATGGAGCAAA 364624 ||||||| |||| | ||||| || |||||| ||||||||| | ||| || | || Sbjct 2860 TATTCCAAATTTATTAGATGGTTTAAAACCTGGACAAAGAAAAGTACTTTTTGCAACA-- 2917 Query 364625 TTTAAGAGGATTAGAAAAAGATCAAGTAAAAGTAGCTCAATTAGCAGGTTTTGTATCTGA 364684 ||||| | | || | || || | ||||| || |||||||| |||| ||| |||| Sbjct 2918 TTTAAAAAAAAGCTTAATA-ATGAACTTAAAGTTGCACAATTAGCTGGTTATGTTGCTGA 2976 Query 364685 CCGGGTAGCTTATCATCACGGTGAGGCAAGTTTAATGGGAGCAATAATTGGAATGGCACA 364744 | ||||||||||| || || || || | | || || ||||| || Sbjct 2977 ACATAGTGCTTATCATCATGGAGAATCATCATTGCAAAGTACTATTGTTAATATGGCTCA 3036 Query 364745 AAATTTTGTTGGAAGTAATAATGTAAATTTACTAGAACCAAAAGGACAATTTGGAAGTCG 364804 |||||||||||||||||||||| ||||| || |||||||| || |||||||| ||| | Sbjct 3037 AAATTTTGTTGGAAGTAATAATCTAAATCTATTAGAACCATGTGGTCAATTTGGTAGTAG 3096 Query 364805 AGTAATGGGAGGTAAAGATTC---TGCCAGCCCACGTTATATTTGGACCAAACTTGAAAA 364861 | | || || |||||| | ||| | |||||||| | || || || || Sbjct 3097 AAAAGAAGGTGGAAAAGATGCAAGTGC---TGCTCGTTATATATTTACTAAGCTATCTAA 3153 Query 364862 AGTGGCAGGATTAATATTTAGAAAAGAAGATAATCCAATTTTAAATTATATTAATGATGA 364921 | | | ||| || || | | | ||| |||| | |||| |||| | ||||||| Sbjct 3154 ATGGACTAGATATATTTTCCCAGAGGCTGATGATCCTTTATTAACTTATTTATATGATGA 3213 Query 364922 TGGATTAATGGTTGAACCTGAATTTTATCTTCCTATTATTCCTATGATTTTAGTAAATGG 364981 |||| | |||||||| || ||| |||| || ||||| |||||||| |||||||| Sbjct 3214 TGGACAACAAATTGAACCTTTATATTACGTTCCAATAATTCCAATGATTTTGGTAAATGG 3273 Query 364982 AGCAACAGGCATTGGTACTGGTT 365004 | || |||||||| |||| Sbjct 3274 TACTGATGGAATTGGTACAGGTT 3296 Score = 134 bits (148), Expect = 5e-26 Identities = 401/597 (67%), Gaps = 40/597 (7%) Strand=Plus/Plus Query 363743 AGGAATTCCTAAACTAGAAGATGCTAATAAAGCAGGAACAAAAGATGCTCATAAATGTGG 363802 |||||| || ||||| |||||||| || |||| || | || || | |||||| Sbjct 2050 AGGAATCCCAAAACTTGAAGATGCAAACGAAGCTGGTGGACCCCATTCTAAAAAATGTAC 2109 Query 363803 A-TTATATTTAGCAGAGGGAGATTCTGCTCT---TTCTATGATTCTGTCAGGGTTATCAA 363858 ||||| ||| | || || ||||||||| |||| || ||| |||| ||||| | Sbjct 2110 TCTTATACTTA-CTGAAGGTGATTCTGCTAAAACTTCT-TG--TCTTGCAGGATTATCTA 2165 Query 363859 GTAAAGATAGAAATTTTTATGGTGCCTTTCCGTTAAAAGGAAAATTATTAAATGTAAGAG 363918 | | |||| | | || ||| | ||||| || || ||| | |||||||| |||| Sbjct 2166 TTGTTGGTAGAGACTATTTTGGAGTATTTCCACTACGTGGTAAACTTTTAAATGTTAGAG 2225 Query 363919 AAGCATCAGTTAAACAAATTATGGGAAATGATGAGATATCAAACCTTaaaaaaaTTTTAG 363978 |||| ||| |||||||| || || |||| ||| ||| ||| || ||||| || | Sbjct 2226 AAGCTTCATTTAAACAACAAATTGGTAATGTTGAAATACAAAATATTCTTAAAATATTGG 2285 Query 363979 GATTACGTAATGAATTTAAATATGAAATGGATGAAGAATTTAATACTTTAAGATATGGAA 364038 ||||| ||| || | |||||||| | ||| | | | ||| ||||||||||| Sbjct 2286 GATTAGGTATTGGACAAAAATATGATA---ATGGACCAGTCAAT---TTAAGATATGGTT 2339 Query 364039 AAGTAATAATTTTATGTGATTCAGATGTAGATGGAAGTCATATTAAGGGACTAATTTTAA 364098 |||| | | |||| |||| ||||| ||||||||||| ||||| ||| | | Sbjct 2340 CTTTAATGCTAATGACTGATCAAGATCATGATGGTAGTCATATTAAAGGACTCATTATTA 2399 Query 364099 ATATGTTTCA-TAGTATGTGGCCTAATCT-TTTAAAAAGAGAAGGTT-TTATTACAACTA 364155 || | | || || ||| ||||| | | | || | ||| | || ||| |||| | Sbjct 2400 ATTTAATACATTATTAT-TGGCCAAGTTTAATTCATTTTAGAGGATTCTTAAAACAA-TT 2457 Query 364156 TGAACACTCCAATTGTTAAAGCAACAAAAGGA---AAAGAAATATTAAAATTTTATAATT 364212 || | ||||| ||||||||||| | ||||||| || ||||| | || | || || Sbjct 2458 TGTA-ACTCCTATTGTTAAAGCTAAAAAAGGATCTAATGAAATCT---CGTTCTTTACTT 2513 Query 364213 TAACTGATTATGATAATTGGAGAAATGATAAT------AATACAAAAGGATATTATATT- 364265 || ||| ||||| | |||||||| ||||| || ||| |||| | ||| Sbjct 2514 TATATGAATATGAACAATGGAGAAAGAATAATTCATCAAACTTAAATGGAT-GGAGATTC 2572 Query 364266 AAATATTACAAAGGATTAGGAACATCT---GATTCTAAAGAAGCTAAAGAATATTTT 364319 || ||||| ||||| ||||| |||||| || ||| ||| |||||| |||||| Sbjct 2573 AAGTATTATAAAGGTTTAGGTACATCTACAGA-TCT--TGAATTTAAAGAGTATTTT 2626 >seq662 Length=1762 Score = 125 bits (138), Expect = 3e-23 Identities = 190/270 (70%), Gaps = 9/270 (3%) Strand=Plus/Minus Query 451334 GTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCT 451393 || || ||||| || |||||| | || || ||||||||||| ||||| || ||| || Sbjct 1762 GTGCCAGCTTACTTTAATGATTCTCAGCGTCAAGCAACTAAGGATGCTGGCTCTATAGCA 1703 Query 451394 GGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTA 451453 || |||||||| |||| |||||||| || |||||||| ||||| ||||| ||| | Sbjct 1702 GGCTTAAATGTAACAAGAATCATTAATGAGCCAACAGCAGCGGCTCTTGCATACGGAAT- 1644 Query 451454 GGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACT 451513 ||||| || |||| | |||| || ||| | |||||| || ||||| ||| Sbjct 1643 GGAAA--------AAGCAGATGGCAAAACAATCGCAGTTTATGATTTGGGAGGAGGTACT 1592 Query 451514 CATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGT 451573 |||| |||| | | ||| | || || |||||||| || ||||| |||||| Sbjct 1591 TTCGATATTTCTATTTTAGAGATTCTTGGCGGAGTGTTTGAAGTTAAAGCAACTAATGGT 1532 Query 451574 GATACTCATCTAGGAGGTGAAGATATTGAT 451603 | ||| |||||||| ||||| ||||| Sbjct 1531 AACACTTCCCTAGGAGGAGAAGACTTTGAT 1502 >seq739 Length=4651 Score = 120 bits (132), Expect = 1e-21 Identities = 144/195 (74%), Gaps = 3/195 (2%) Strand=Plus/Minus Query 96115 TACTTTACTAATGTTTAATGCTGGGCTCCAGTTATTTTTTAAAATATCTAAACAAATTGC 96174 |||| | |||| |||| || ||||||||| || |||||||||||| || ||||| || Sbjct 1148 TACTGTTCTAAGAGTTAAAGCAGGGCTCCAGGCATCTTTTAAAATATCCAAGCAAATAGC 1089 Query 96175 ACCTGT---AGTACTAATATTTGGATGATAAATAGGAGTTTTAAATATAATTTTAGGAGG 96231 ||||| | || |||||| ||||| |||| || | ||| ||| ||| ||||| Sbjct 1088 TCCTGTTTGACTAGAAATATTCGGATGCCAAATTCTTGTGATGAATTTAACTTTTGGAGG 1029 Query 96232 CTTATATGGATAGTCTTCAGGAAAAGTAATTTCTAATTGGAATACTCCACCCTCATAGGG 96291 || |||||||| |||| || | | |||| || | |||||||| ||||| ||||| || Sbjct 1028 CTCGTATGGATATTCTTTTGGTACAATAATATCAAGTTGGAATATACCACCTTCATATGG 969 Query 96292 TGTTCCTGAAGGGCC 96306 ||||||| ||| || Sbjct 968 TGTTCCTATAGGCCC 954 >seq332 Length=38429 Score = 120 bits (132), Expect = 1e-21 Identities = 161/224 (72%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| || ||||| | || || || || || || | || |||||| | || Sbjct 24672 ATGCAAATTTTTGTCAAAACTTTAACAGGAAAGACCATCACATTGGAAGTTGAACCTTCC 24613 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||| | | || ||| || || |||||||| || ||||||||||||||| Sbjct 24612 GATACTATTGAGAATGTAAAGGCAAAGATCCAGGATAAGGAGGGTATTCCTCCTGATCAA 24553 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | || || | || || ||| | |||||||| |||||| | | || || ||| Sbjct 24552 CAGCGTCTGATCTTTGCTGGAAAGCAATTGGAAGATGGTAGAACTCTATCTGACTACAAT 24493 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 || | ||||| | || | || |||||||||||||| ||||| Sbjct 24492 ATCCAGAAGGAGTCCACTTTGCATTTAGTATTAAGACTTAGAGG 24449 >seq151 Length=14192 Score = 109 bits (120), Expect = 2e-18 Identities = 129/172 (75%), Gaps = 2/172 (1%) Strand=Plus/Minus Query 412289 TTCCAAAACGACCACTTCTACCAATTCTATGTATAAAAGTTTCATGATTTTTAGGTAAAT 412348 ||||||| | |||||||| ||||||| ||| ||| | ||| | ||| |||||| || Sbjct 3044 TTCCAAATCTGCCACTTCTTCCAATTCGATGGATATATAATTCTTTATTAATAGGTAGAT 2985 Query 412349 CATAATTTATAACTAATTTAACCTCAGGAATATCTATCCCCCGTGCTAATAAATCAGTTG 412408 | || |||| |||||| || || | | | ||| || || | | | ||||||| |||| Sbjct 2984 CGTAGTTTACAACTAAGTTGACTTGTTGTACATCAATACCTCTTCCCCATAAATCTGTTG 2925 Query 412409 TTAATAAAATTCGTGTTTTTCCCTCTCTAAATTCATCTACAATTTTACTTCT 412460 | | ||||| |||||||||||| |||||||| || ||| |||| || ||||| Sbjct 2924 TAATTAAAACTCGTGTTTTTCCTTCTCTAAACTC-TCT-CAATATTTCTTCT 2875 >seq364 Length=21141 Score = 107 bits (118), Expect = 8e-18 Identities = 128/174 (74%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 248791 ATTTTCATTGGTCCTATGTTTTATTTGAGACTTAAACATATGGTACTTGATAAAGTTCAT 248850 ||||| |||| ||||| | ||| | | | ||||||||||| || |||||| | ||| Sbjct 9974 ATTTTTGTTGGGCCTATTTATTACCAAAAATTGAAACATATGGTTCTCGATAAAATGCAT 10033 Query 248851 TCCAGAAGTATGGGTCCTAGACAAGCTATTACTAGACAACCCATGGAAGGACGTTCTAAA 248910 | ||| | | ||||||||||||| | |||| |||||||||| |||||| | ||||| Sbjct 10034 GCAAGAGGAAGGGGTCCTAGACAAATTCTTACCAGACAACCCACTGAAGGAAGATCTAAG 10093 Query 248911 GATGGAGGTCTTAAAATTGGAGAGATGGAAAAAGATGCAATGGTTGCTCATGGA 248964 |||||||| || |||| || ||||||| |||| | || ||| ||||| Sbjct 10094 GATGGAGGACTACGTCTTGGTGAAATGGAAAGAGATTGTTTAGTAGCTTATGGA 10147 >seq446 Length=27489 Score = 89.7 bits (98), Expect = 2e-12 Identities = 168/242 (69%), Gaps = 10/242 (4%) Strand=Plus/Minus Query 420706 CCAAATGTATCAATTCCTCTTCTTCCAGCTCGTCCTGCCATTTGAAGAAATTCATCAGTT 420765 ||||| |||||||| |||||||||||||||| ||||| |||||| | ||||| | Sbjct 24788 CCAAAAGTATCAATACCTCTTCTTCCAGCTCTTCCTGACATTTGTGTATATTCAGAA--- 24732 Query 420766 CGTAAGAA-TCTTCTA---CCACAATCATCATATTTAGATAAT-CCAGTAAATACAACAG 420820 | ||||| | ||||| | |||||||||| |||| | ||||||||||| || Sbjct 24731 -GAAAGAAGTATTCTATTTTTTCGTCCATCATATTT-TTTAATACTAGTAAATACAATAG 24674 Query 420821 TTTTTGTAGGCATATTTACACCAACAGAAAAAGTTTCAGTTGCTAACAAAACTTTAATTA 420880 | | | || ||| | || | ||| | || |||||||| || || ||||| |||| Sbjct 24673 ATCTAGCTGGACAATTAATTCCCATAGATATTGTCTCAGTTGCAAATAATACTTTGATTA 24614 Query 420881 AtttttttGAATAAAGAATTTCAACAATTTCTTTTAAAATAGGAATTATACCAGAATGAT 420940 || | | | | | | || ||| |||||||| | ||| |||| || ||| ||||| Sbjct 24613 ATCCTCTAGTAAATAAGATCTCAGTCATTTCTTTGATAATTGGAAGCATTCCACTATGAT 24554 Query 420941 GA 420942 || Sbjct 24553 GA 24552 >seq257 Length=49869 Score = 87.8 bits (96), Expect = 7e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 420714 ATCAATTCCTCTTCTTCCAGCTCGTCCTGCCATTTGAAGAAATTCATCAGTTCGTAAGAA 420773 ||||| ||||||||||| |||| || |||||||| ||| || ||| ||| || Sbjct 4262 ATCAAGACCTCTTCTTCCTGCTCTACCACTCATTTGAATAAACTCTCCAG-AGTTAACAA 4320 Query 420774 TCTTCTACCACAAT-CATCATATTTAGATAATCCAGTAAATACAACAGTTTTTGTAGGCA 420832 | | ||| | | ||||| |||| | | |||||| | ||| ||||||| ||||| Sbjct 4321 TTCTGTACTCCTTTCCATCAAATTTTCTAAGTGAAGTAAAGATAACCGTTTTTGCAGGCA 4380 Query 420833 TATTTACACCAACAGAAAAAGTTTCAGTTGCTAACAAAACTTTAATTAAtttttttGAAT 420892 | || | || | ||||||||| || || | || | |||||||| ||| | | | Sbjct 4381 TGTTAATTCCCATAGAAAAAGTCTCTGTAGAGAATAGTACTTTAATAAATGACTCTCCAA 4440 Query 420893 AAAGAATTTCAACAATTTCTTTTAAAATAGGAATTATACCAGAATGATGA 420942 |||| | ||||| ||||| |||| || ||||| || ||| ||||||| Sbjct 4441 AAAGGAGCTCAACTATTTCCTTTACAACAGGAAGTAAACCTCCATGATGA 4490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975691162252208