Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20parvum_20[genbank_20GCA_5F002093595.1_202017-04- 14] 1,076 sequences; 9,111,587 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq145 246 2e-59 seq566 237 1e-56 seq245 165 7e-35 seq662 123 2e-22 seq424 122 7e-22 seq191 116 3e-20 seq332 104 2e-16 >seq145 Length=38051 Score = 246 bits (272), Expect = 2e-59 Identities = 579/864 (67%), Gaps = 25/864 (3%) Strand=Plus/Minus Query 551749 TATCTCTCGAAGATGGTCTCTTTTCTGTATTAGCTACTAGTGGAGATTCTCATCTTGGTG 551808 || || | ||||||||| | ||| || |||||| ||| ||| |||| | |||| Sbjct 14151 TAACTATTGAAGATGGTATTTTTGAAGTTAAAGCTACCGCTGGTGATACTCACTTGGGTG 14092 Query 551809 GCGAAGATTTTGATAATAGACTGGTATCATGGTGTGTTGAAGATTTTAAACGAAAAAACA 551868 | |||||||||||||| ||||| ||| || ||||| ||||||| || |||| || | Sbjct 14091 GTGAAGATTTTGATAACAGACTCGTAGAATTCTGTGTACAAGATTTCAAGAGAAAGAATA 14032 Query 551869 AAGTT---GATCTATCTACATCTGCCAAAGCTCTTCGTCGTCTAAGAACTGCTTGCGAAA 551925 || | ||| || | ||| ||| | |||| | | | || |||||| ||||| Sbjct 14031 GAGGTATGGATTTAACCACAAATGCTAGAGCTTTAAGAAGACTCAGAACTCAATGCGAGC 13972 Query 551926 GAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAAGTAGATTCATTATTTG 551985 | || || || || | |||||| ||||||| | || ||||| |||||||| | | || Sbjct 13971 GTGCAAAGAGAACTTTGTCATCTTCTACTCAAGCTACAATTGAGTTAGATTCACTCTATG 13912 Query 551986 AGGGAATTGATTATA-ATACGCCTATTTCGAGGGCCAAATTTGAAGATATTTGTTCTGAT 552044 | || ||||||||| | ||| || || || | ||| ||||| | || ||||| Sbjct 13911 AAGGTATTGATTATTCAGTTGCC-ATCAGTAGAGCTAGATTCGAAGAACTCTGCGCTGAT 13853 Query 552045 CTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGATTCAAAGATTGATAA- 552103 ||| | ||| | | ||||| || |||| | | ||| | || || || Sbjct 13852 TACTTCCGTGCAACTTTAGCTCCAGTTGAGAAAGTACTCAAGGATGCTGGTATGGACAAG 13793 Query 552104 --ATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGC 552161 ||| |||||||| |||| | |||||||| |||||| | ||||| || ||| Sbjct 13792 AGATCT---GTACATGATGTTGTATTGGTTGGTGGTTCTACACGTATTCCAAAGGTTCAG 13736 Query 552162 GAAATG-TTAAGTTCTTATTTCAATGGTAAAAA---ATTAAATGAAAGTGTTAATCCAGA 552217 | || || || || ||| || |||||| | || || | || | |||||||| Sbjct 13735 GCCTTGATTCAGGAATTCTTT-AACGGTAAAGAGCCATGCAAAGCAA---TCAATCCAGA 13680 Query 552218 TGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGA---CAAACTGA 552274 || |||||||| |||||||| || | ||||| ||||| | ||| ||| | Sbjct 13679 CGAAGCTGTTGCTTATGGTGCTGCTGTACAAGCTGCTATCTTAAATGGTGAGCAATCCTC 13620 Query 552275 TGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAAC 552334 || |||| || | || | | |||||| |||| |||| || ||||||||||| Sbjct 13619 TGCCG---TACAGGATCTCTTATTATTGGATGTTGCTCCATTATCACTCGGTTTAGAAAC 13563 Query 552335 AGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATC 552394 | ||| ||| ||||||| || ||||| || | ||||| ||||| || || || | Sbjct 13562 TGCTGGTGGTGTTATGACCAAGCTTATTGAACGTAATACAACTATCCCAGCAAAGAAGAC 13503 Query 552395 TCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGG 552454 | || || |||| ||| | ||||| || | || ||| || ||| ||| ||| || Sbjct 13502 ACAAGTCTTCACTACTTATGCTGATAACCAGAGTGGTGTCTTGATCCAAGTTTATGAGGG 13443 Query 552455 AGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTATTCC 552514 || ||| | ||||| ||||| ||| || || | || || | || |||||||| Sbjct 13442 TGAGAGAGCCATGACTAAGGATAACCATCTCCTCGGAAAGTTCCATCTTGATGGTATTCC 13383 Query 552515 TCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAAT 552574 || || || | || ||||| ||||||||||| || || ||||| ||||| ||||| || Sbjct 13382 ACCAGCACCAAGAGGTGTACCACAAATTGAAGTCACCTTTGATATTGATGCTAATGGTAT 13323 Query 552575 TTTGAATGTGACTGCTTGTGATAA 552598 ||||||||| ||||| |||||| Sbjct 13322 CTTGAATGTGTCTGCTGTTGATAA 13299 Score = 214 bits (236), Expect = 1e-49 Identities = 382/553 (69%), Gaps = 11/553 (2%) Strand=Plus/Minus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 |||||| ||||| |||||||| |||||||| ||||||||||| ||| ||| | || Sbjct 14768 AGCTATTGGTATTGATTTAGGTACCACATACTCATGTGTTGGTGTATGGAGAAACGATAC 14709 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 || || ||| || | || |||||||||||| | || || ||||| ||||| | || || Sbjct 14708 TGTAGATATTGTTCCAAACGATCAAGGTAACCGTACAACACCATCATATGTAGCATTTAC 14649 Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAA 550170 |||||||| | | | |||||||||||||||| | |||| || | || || || Sbjct 14648 AGAAACTGAGCGTCTTATTGGTGATGCAGCAAAGAACCAAGTTGCTAGAAACCCAGAAAA 14589 Query 550171 TACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGC 550230 ||| ||||||||||||||||| | ||||| |||| ||| ||||| | | || || Sbjct 14588 TACAGTTTTTGATGCTAAACGTCTTATTGGTAGAAAGTTTGATGATCAGGCAGTACAAAG 14529 Query 550231 AGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTC--TGGAAAACCTTAT----AT 550284 ||||||| || ||||| || || | |||| | | | ||| || | || | Sbjct 14528 TGATATGACTCACTGGCCATTTAAAGTAGTTAGAGGTCCAAAGGACAAGCCAATCATCAG 14469 Query 550285 TG-AAGCTACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGG 550343 || || ||||| | | || | || |||| | ||| ||||||| |||||| Sbjct 14468 TGTAAACTACTTAGG--TGAAAAG--AAGGAATTCCATGCTGAAGAAATTTCTGCTATGG 14413 Query 550344 TTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAG 550403 ||||| || ||||| | | | || | | |||| || ||| | | || | Sbjct 14412 TTTTACAAAAGATGAAGGAGATCTCTGAAGCATACTTGGGTCGCCAAATTAAGAACGCTG 14353 Query 550404 TAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGAC 550463 || | ||||| ||||| ||||| ||||||||||| |||||||| || || ||||| || Sbjct 14352 TAGTTACTGTTCCAGCTTATTTCAATGACTCACAGCGTCAAGCAACAAAGGATGCAGGTG 14293 Query 550464 GTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCAT 550523 |||||||| | ||||| | | || || || || || ||||| ||||| |||| | Sbjct 14292 CAATTGCTGGTTTGAATGTAATGAGAATCATTAACGAGCCAACTGCAGCTGCTATTGCTT 14233 Query 550524 ATGGACTTGATAA 550536 |||| |||||||| Sbjct 14232 ATGGTCTTGATAA 14220 Score = 86.0 bits (94), Expect = 5e-11 Identities = 106/145 (73%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 361701 CAAGACCATAAGCTAATGAAGCAGCTGTTGGTTCGTTAATTATTTTAATAACATTGAGTC 361760 ||||||||||||| | | ||| || ||||| |||||||| ||| | || ||||| | | Sbjct 14224 CAAGACCATAAGCAATAGCAGCTGCAGTTGGCTCGTTAATGATTCTCATTACATTCAAAC 14283 Query 361761 CCGCTATTTTTGATGCATCTAAAGTGGCTTGACGTTGTGCATCATTAAAATATGCAGGAA 361820 | || ||| |||||| || |||||||| |||| ||||| ||||| || |||| Sbjct 14284 CAGCAATTGCACCTGCATCCTTTGTTGCTTGACGCTGTGAGTCATTGAAATAAGCTGGAA 14343 Query 361821 CAGTAATCACTGCTTTTTCAACTTG 361845 |||||| || || || | || ||| Sbjct 14344 CAGTAACTACAGCGTTCTTAATTTG 14368 >seq566 Length=7360 Score = 237 bits (262), Expect = 1e-56 Identities = 479/700 (68%), Gaps = 33/700 (5%) Strand=Plus/Plus Query 368481 TGAAACATTTAGAGAAAAAATGTTAAATAATAATTCTAAAATAAATTGGATGCCATCTAA 368540 |||| | || | ||| ||| | |||| ||||||| |||| |||||||| ||| | | Sbjct 2338 TGAATCTTTAAAAGATAAATTATTAATTAATAATGAAAAAACTAATTGGATTCCAAATTA 2397 Query 368541 TATTGGAACAAAACATTTTGATAATTGGCTCCAAAATTCAGTTGATTGGTGTATTTCAAG 368600 | || | |||| ||| |||||||| | || || | ||||||||| || | Sbjct 2398 TGTTAAAGAAAAAAGATTTCATAATTGGTTACAGGATGCTAGAGATTGGTGTGTTAGTCG 2457 Query 368601 AAGTAGGTTTTGGGGAACTCCAATTCCAGTATGGAAATCTGATGATGGTGAAGAAATTGT 368660 | | | ||||||||||| || || || ||||| ||| || ||| | | ||| Sbjct 2458 TAATCGTTTTTGGGGAACACCTATACCTATATGGGTATCAGAAGATTATACAATTATTAA 2517 Query 368661 TTGTATAGGTTCAATTAAAGAATTGCAAGAATTA---TCTGGTGTGCAAAATA------T 368711 ||||| ||| ||| ||||||| || ||| || | | || ||| | Sbjct 2518 ATGTATTGGTAGTATTGAAGAATTAAAATCTTTAGCATCCAATTTAAAAGATAAAGAAAT 2577 Query 368712 TAGTGATTTACATATTGATAAAATTGATCACATTAAAATTCC--ATCAAAGAAAGGAAAA 368769 || |||| ||||| | || |||||| | ||| ||||||| ||| |||| ||||| Sbjct 2578 TAATGATATACATCGTCATTTTATTGATTATATTGAAATTCCTGATCCAAGA--GGAAAT 2635 Query 368770 GGTTT------ATTGTCTCGAGTTGAAGGAGTTTTGGATTGCTGGTTTGAATCAGGTTCT 368823 || ||| || |||||| |||||| ||||| ||||||||||| |||||| Sbjct 2636 AATTATCCACCATTAAAAAGAATTGAAGAAGTTTTTGATTGTTGGTTTGAATCTGGTTCT 2695 Query 368824 ATGCCTTATGG-TCAAATACATTATCCATTTGATAACGCAAAATACTTTGATAATGATAA 368882 |||||||||| || | || ||||||||||||| || | ||| ||| ||||| Sbjct 2696 ATGCCTTATGCATCCATTA-ATTATCCATTTGAAAATCAAGAATTATTTAATAAT----- 2749 Query 368883 AGATTATGTGGCTGATTTTGTAACAGAATCAATTGATCAAACACGTGGTTGGTTTTATAC 368942 | ||| || | |||||||| ||| | ||||||||| | || ||||||||||| Sbjct 2750 ATATTTCCTG-CAGATTTTGTTGGTGAAGGTTTAGATCAAACAAGAGGATGGTTTTATAC 2808 Query 368943 CCTATTAGTATTATCCACAGCTATTTTCGATAAACCGGCTTTTAAAAATGTAATAGTAAC 369002 || | |||||||| ||||| | || ||| |||| |||||||||||| | || || | Sbjct 2809 ATTAATGGTATTATCAACAGCATTATTTGATCAACCAGCTTTTAAAAATATTATTGTTAA 2868 Query 369003 TGGTATTGTTAATGCATCTGATGGTCAAAAGATGTCAAAAAG--TAAGGGTAATTATTCC 369060 |||| | ||| |||||||||||| |||| ||||||||||| ||| |||||| | Sbjct 2869 TGGTTTAGTTTTAGCATCTGATGGTAAAAAAATGTCAAAAAGATTAA--AAAATTATCCT 2926 Query 369061 GATCC-TAATATTTTAATTGATAAATTTGGTGCTGATACTTTGAGATTATACCTATTGTC 369119 ||||| | | || || || |||||| |||||| ||| |||| ||||||| || | Sbjct 2927 GATCCATTAGATATT-GTTAATAAATATGGTGCAGATTCTTTAAGATTATTTTTAATTAA 2985 Query 369120 ATCACCTGTAGTAAAAGCAGAATCTATTAAATTTGATGAA 369159 ||||| || || | ||||||| || | | |||| | ||| Sbjct 2986 TTCACCAGTTGTTAGAGCAGAAACTTTAAGATTTAAAGAA 3025 >seq245 Length=10549 Score = 165 bits (182), Expect = 7e-35 Identities = 343/505 (68%), Gaps = 13/505 (3%) Strand=Plus/Minus Query 428100 AACCGGTTCCAATTCCTTCTGTACCATTTACAAGAATCATTGGAATGACTGGTGCATAAT 428159 |||| || |||||||| || ||||||||||| | |||||||||||| | ||| | |||| Sbjct 3296 AACCTGTACCAATTCCATCAGTACCATTTACCAAAATCATTGGAATTATTGGAACGTAAT 3237 Query 428160 ATTGTGGTTCAATCATTTTATTATCTTCATATTGTAAATGTAAAATATCAAAATCATGCT 428219 || |||||||| || ||| |||||| || ||| | | | |||| || Sbjct 3236 ATAAAGGTTCAATTTGTTGTCCATCATCATATAAATAAGTTAATAAAGGATCATCAGCCT 3177 Query 428220 CGATAAATAtttttttAGCCAATTCATCAAGTTGTGTAAAGATATATCTTGCG---CTTG 428276 | || || | | ||| | ||| | || | ||||| ||||| | || |||| Sbjct 3176 CTGGGAAAATATATCTAGTCCATTTAGATAGCTTAGTAAATATATAACGAGCAGCACTTG 3117 Query 428277 CGGAATCTTTACCTCCTGACATTCTAGTTCCAAATTGTCCATTAGGCATCAATAAATTAA 428336 | |||||| || ||| ||||| | |||||||| ||| || |||| ||| | Sbjct 3116 C---ATCTTTTCCACCTTCTTTTCTACTACCAAATTGACCACATGGTTCTAATAGATTTA 3060 Query 428337 TATTATTACTTCCCACATAATTTTGGGCCATATTAACAATGGTACTAGTTAAGGATTGTT 428396 |||||||||||| ||| ||||||| |||||||||||||| ||||| || ||| || Sbjct 3059 GATTATTACTTCCAACAAAATTTTGAGCCATATTAACAATAGTACTTTGCAATGATGATT 3000 Query 428397 CACCATGATGATATTTAGTTCTTTTTGAAACTGCACCTTGTAATTCTGATACCTTTATTT 428456 | ||||||||||| | | || | ||| ||| ||||| || | ||||| Sbjct 2999 CTCCATGATGATAAGCACTATGTTCAGCAACATAACCAGCTAATTGTG-CAACTTTA--A 2943 Query 428457 CTTCTTTATAAATACCTTCTTCTACTGATCCATAAAATACTTTGCGTTGTGATGGTTTGA 428516 ||| |||| || || || | || | || ||| |||||| | |||| ||||| | Sbjct 2942 GTTCATTATTAAGCTTTTTTTTAAATGTTGCAAAAAGTACTTTTCTTTGTCCAGGTTTTA 2883 Query 428517 ATCCATCCATAATATTAGGTATAGATCTTAAATTATC--ATCCACTGAGAATGATATTAG 428574 | ||||| | | ||| || |||||||| | |||| ||| ||| ||| ||| || Sbjct 2882 AACCATCTAATAAATTTGGAATAGATCTAGTAGTATCATATCTACT--AAATAATACAAG 2825 Query 428575 TTCTTGATGAATGAAATCATAATAT 428599 ||||| |||||| |||||| ||||| Sbjct 2824 TTCTTTATGAATAAAATCAAAATAT 2800 >seq662 Length=1762 Score = 123 bits (136), Expect = 2e-22 Identities = 209/300 (70%), Gaps = 2/300 (1%) Strand=Plus/Minus Query 552303 GATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATC 552362 || ||||| || ||||| | ||| | ||||| | || || || | ||| | || Sbjct 1024 GACGTTACACCCTTATCTTTAGGTATTGAAACTTTGGGTGGAGTTTTTACTCGATTAATT 965 Query 552363 GATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAAT 552422 | |||||||| || || ||| |||||| | ||||| || || | |||| ||| Sbjct 964 AACAGAAATACCACAATACCTACTAAAAAGAGCCAAGTATTCTCCACTGCTGCAGACAAT 905 Query 552423 CAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAAT 552482 |||||| ||| |||| || |||| ||||||||||| |||| || |||||||| Sbjct 904 CAAACTCAAGTTGGAATTAAAGTTTTCCAAGGAGAAAGAGAATTTGCTGCTGATAATAAG 845 Query 552483 CAACTTGGT-ACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAAT 552541 ||||| | ||| || | | || |||||||| || || | || ||||| ||||| Sbjct 844 TTGCTTGGACAATTTGAAATGATG-GGAATTCCTCCAGCACCCAGAGGGGTACCTCAAAT 786 Query 552542 TGAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAAATC 552601 |||||| || || ||||| ||||| ||||||||| ||||||| ||| |||||| || Sbjct 785 TGAAGTCACCTTTGATATTGATGCAAATGGAATTATGAATGTTGGTGCAATTGATAAGTC 726 >seq424 Length=41796 Score = 122 bits (134), Expect = 7e-22 Identities = 135/180 (75%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 930654 AAAGTATTAATTGATTTTTCTTCACCAAATATTGCCAAAGAAATGCATATTGGACATTTG 930713 |||||| | | ||||| || |||||||| |||||||||||||||||| ||||||| || Sbjct 5734 AAAGTAATTGTAGATTTCTCATCACCAAACATTGCCAAAGAAATGCATGTTGGACACTTA 5675 Query 930714 CGTTCTACCATTATTGGAGAATCTTTATGTAGATTATATGAATATTGTGGAAGTAAAGTT 930773 | ||||| |||||||| || | ||||||| | |||||||| ||| | |||| Sbjct 5674 AGATCTACAATTATTGGTGATACAACATGTAGAATTCTTGAATATTTAGGATTTGAAGTA 5615 Query 930774 CATCGAGTCAATCATATTGGTGATTGGGGAACACAATTTGGTATGTTAATTGCTTATATA 930833 |||| ||||| |||| |||||||| || |||||||| ||| | |||| ||| || Sbjct 5614 TTAAGAGTTAATCACGTTGGAGATTGGGGTACTCAATTTGGCATGCTTATTGAATATTTA 5555 >seq191 Length=60473 Score = 116 bits (128), Expect = 3e-20 Identities = 273/401 (68%), Gaps = 12/401 (3%) Strand=Plus/Plus Query 344255 TTTTATCTCCCACCATTTGTTTGAGACGTTGATAATATGTTGGACCAATGAATATTTTAA 344314 ||||||| | ||||| ||||| || | ||||| || ||||| ||||| || ||| | Sbjct 1866 TTTTATCGTCAACCATATGTTTTAGTCTCTGATAGTAAGTTGGCCCAATAAAGATTCTCG 1925 Query 344315 CTTCCATTCTTTGTCCCGTCATTCCATTATACATTGTTTCATTTCCCCATGCTTCATGT- 344373 |||| ||| | |||||| ||||| |||||| ||||||||| || ||| || Sbjct 1926 ACTCCAATCTCTTTCCCGTATGGCCATTGTACATTACTTCATTTCC--ATTTTTC-TGAA 1982 Query 344374 -CCTAAAGCTACTAAATCATCATTAATTTTATTAATAT-TAACTCCTGTAAATGGAGTTG 344431 || | ||| || | | | | | || | | ||| | ||||| ||||||| Sbjct 1983 ACCCGGAACTATGTAAACGGCTAGATATCTCTTCAACTGTAATTTTCGTAAAAGGAGTTG 2042 Query 344432 CATCTCCATATACCCCTTTAATTGCACAAACTTTACCTAGTAAACATTCAATTAATTGAC 344491 |||| || | | |||| |||||| || |||| || || | |||||||||||| || | Sbjct 2043 CATCACCCTCCAATCCTTGAATTGCGCACGCTTTGCCAAGCAGACATTCAATTAAATGGC 2102 Query 344492 CTATCGTCATACGTTTGGGCATACAATTAGGATTAATAATAATATCAGGAATTAATCCTG 344551 | || |||||||| || ||| || |||||| |||||||| || |||| |||||| Sbjct 2103 CAATTGTCATACGCGAAGGAATAGCATGAGGATTCATAATAATGTCTGGAA-TAATCC-C 2160 Query 344552 ATTTTGTG--AATGGAAGATCTGCA-CGATGAATTTTAAATCCAACTGTTCCTTTTTGTC 344608 || ||||| ||||| | ||| || || || || | || | ||| || ||||| | Sbjct 2161 ATCTTGTGTAAATGGCATATCCTCAGTTCTGTATGTT-ATGCCGATTGTACCCTTTTGGC 2219 Query 344609 CAGCTCTTGATGAGAATTTATCACCTACTGCTGGAATTCTT 344649 || ||| |||| || ||||| || || || |||||| Sbjct 2220 CATGTCTAGATGCAAACTTATCTCCAACATGAGGTATTCTT 2260 >seq332 Length=38429 Score = 104 bits (114), Expect = 2e-16 Identities = 132/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 563293 ATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTT 563352 |||||||| |||| ||||||||| |||||| | ||| ||||| ||||| || || | Sbjct 24491 ATATTGTAGTCAGATAGAGTTCTACCATCTTCCAATTGCTTTCCAGCAAAGATCAGACGC 24550 Query 563353 TGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTA 563412 || |||||||||||||| || || ||||| || || ||| ||||| |||||| ||| Sbjct 24551 TGTTGATCAGGAGGAATACCCTCCTTATCCTGGATCTTTGCCTTTACATTCTCAATAGTA 24610 Query 563413 TCAGTGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGC 563472 || | | | ||| | || | || || || || | |||||| || ||||||||| Sbjct 24611 TCGGAAGGTTCAACTTCCAATGTGATGGTCTTTCCTGTTAAAGTTTTGACAAAAATTTGC 24670 Query 563473 AT 563474 || Sbjct 24671 AT 24672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029239096267240