Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20parvum_20[genbank_20GCA_5F002093595.1_202017-04- 14] 1,076 sequences; 9,111,587 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq145 356 2e-92 seq566 264 7e-65 seq533 228 5e-54 seq424 147 1e-29 seq245 141 6e-28 seq662 140 2e-27 seq191 129 4e-24 seq332 122 6e-22 seq622 113 3e-19 seq842 91.5 1e-12 >seq145 Length=38051 Score = 356 bits (394), Expect = 2e-92 Identities = 670/974 (69%), Gaps = 27/974 (3%) Strand=Plus/Minus Query 475310 GGAACTCATGACGTAACTTTACTATCACTCGAAGATGGTCTTTTCTCTGTAAGAGCAACA 475369 || ||| ||| ||| | ||| || | | ||||||||| |||| || | ||| || Sbjct 14173 GGTACTTTTGATGTATCATTATTAACTATTGAAGATGGTATTTTTGAAGTTAAAGCTACC 14114 Query 475370 GCTGGAGATTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGTATCATGGTGTGTT 475429 ||||| ||| | || | |||||||||||||||||||| ||||| ||| || ||||| Sbjct 14113 GCTGGTGATACTCACTTGGGTGGTGAAGATTTTGATAACAGACTCGTAGAATTCTGTGTA 14054 Query 475430 GAAGATTTCAAGAGGAAAAATAAAGTT---GATCTTTCAACATCTGCTAAAGCATTAAGA 475486 ||||||||||||| || |||| || | ||| | | ||| ||||| ||| |||||| Sbjct 14053 CAAGATTTCAAGAGAAAGAATAGAGGTATGGATTTAACCACAAATGCTAGAGCTTTAAGA 13994 Query 475487 CGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTACT 475546 | || |||||| || || ||||| ||| || || | || ||| |||||||| |||| Sbjct 13993 AGACTCAGAACTCAATGCGAGCGTGCAAAGAGAACTTTGTCATCTTCTACTCAAGCTACA 13934 Query 475547 GTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGGGCTAAA 475606 |||| | ||||| || | |||||| ||||||||| | || | || |||| | Sbjct 13933 ATTGAGTTAGATTCACTCTATGAAGGTATTGATTATTCAGTTGCCATCAGTAGAGCTAGA 13874 Query 475607 TTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTCTC 475666 || ||||| | || ||||| ||| | ||| | | || ||||| |||| ||| Sbjct 13873 TTCGAAGAACTCTGCGCTGATTACTTCCGTGCAACTTTAGCTCCAGTTGAGAAAGTACTC 13814 Query 475667 AGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACA 475726 | ||| || | ||||| | || ||||| |||| | || || ||||| ||| Sbjct 13813 AAGGATGCTGGTATGGACAAGAGATCTGTACATGATGTTGTATTGGTTGGTGGTTCTACA 13754 Query 475727 AGAATTCCAAAAATAAGAGAAATGCTTTCATCATATTTTAATGGTAAAAAGTTAAATG-A 475785 | |||||||| | | || || || ||||| |||||| || | || | Sbjct 13753 CGTATTCCAAAGGTTCAGGCCTTGATTCAGGAATTCTTTAACGGTAAAGAGCCA--TGCA 13696 Query 475786 AAGTG-TAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTAT 475844 ||| | ||||| || ||||||||||| ||||| |||||||| ||||| ||||| ||| Sbjct 13695 AAGCAATCAATCCAGACGAAGCTGTTGCTTATGGTGCTGCTGTACAAGCTGCTATCTTAA 13636 Query 475845 CAGGT---CAATCA---GACG---AGAAACTAAATAATATTGTACTTGTTGACGTAACTC 475895 ||| ||||| | || || | || || ||||| | ||||| ||| Sbjct 13635 ATGGTGAGCAATCCTCTGCCGTACAGGATCTCT-TATTATTGGA--TGTTG------CTC 13585 Query 475896 CACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATA 475955 || | ||| | ||| | ||||| | ||| || ||||||| || |||||||| | |||| Sbjct 13584 CATTATCACTCGGTTTAGAAACTGCTGGTGGTGTTATGACCAAGCTTATTGAACGTAATA 13525 Query 475956 CTCCTATCCCATGCAAAAAAT-CAAAAGTATTTTCCACTTATTCTGATAATCAAACAACT 476014 | |||||||| ||||| || || |||| || | |||||| ||||||| || | | Sbjct 13524 CAACTATCCCA-GCAAAGAAGACACAAGTCTTCACTACTTATGCTGATAACCAGAGTGGT 13466 Query 476015 GTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGA 476074 || |||||| | | ||| ||||| ||| | ||||| ||||| | || ||| Sbjct 13465 GTCTTGATCCAAGTTTATGAGGGTGAGAGAGCCATGACTAAGGATAACCATCTCCTCGGA 13406 Query 476075 ACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACT 476134 | || ||||||| |||||||| || || || ||||| || || ||||||||||| || Sbjct 13405 AAGTTCCATCTTGATGGTATTCCACCAGCACCAAGAGGTGTACCACAAATTGAAGTCACC 13346 Query 476135 TTTGATATTGATGCAAATGGTATTCTTAATGTTACTGCTTGTGATAAATCTAGTAACAAG 476194 |||||||||||||| |||||||| | ||||| ||||| |||||| || | ||| Sbjct 13345 TTTGATATTGATGCTAATGGTATCTTGAATGTGTCTGCTGTTGATAAGAGTACTGGTAAG 13286 Query 476195 AGTAAAAATATAACTATTACAAACAATCGTGGTAGATTTACTGAAGAACAAATTCAACGT 476254 || | || || |||||||| ||| || |||||||| | | || | ||| ||||| Sbjct 13285 AGCAGCAAGATCACTATTACTAACGATAAGGGTAGATTATCAAAGGACGATATTGAACGT 13226 Query 476255 ATGGTTGATGAAGC 476268 |||||| |||| || Sbjct 13225 ATGGTTAATGATGC 13212 Score = 253 bits (280), Expect = 1e-61 Identities = 388/551 (70%), Gaps = 3/551 (1%) Strand=Plus/Minus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388 || ||||||||||||||||| || || ||| ||||| | ||| ||| ||| | || Sbjct 14767 GCTATTGGTATTGATTTAGGTACCACATACTCATGTGTTGGTGTATGGAGAAACGATACT 14708 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 ||||| || || | || || |||||||| | ||||||||||||||||| | ||||| Sbjct 14707 GTAGATATTGTTCCAAACGATCAAGGTAACCGTACAACACCATCATATGTAGCATTTACA 14648 Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAAT 474508 |||||||| | ||||||||| ||||| || || | |||| ||| || || | ||| Sbjct 14647 GAAACTGAGCGTCTTATTGGTGATGCAGCAAAGAACCAAGTTGCTAGAAACCCAGAAAAT 14588 Query 474509 ACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCT 474568 || |||||||||||||| | | |||||| | || ||||||||| | || ||| | Sbjct 14587 ACAGTTTTTGATGCTAAACGTCTTATTGGTAGAAAGTTTGATGATCAGGCAGTACAAAGT 14528 Query 474569 GATATGCGTCATTGGCCTTTTAAGGT-GATAAATGT--TGGTGGTAAACCATATATAGAA 474625 |||||| ||| ||||| ||||| || | || | || | || ||| || Sbjct 14527 GATATGACTCACTGGCCATTTAAAGTAGTTAGAGGTCCAAAGGACAAGCCAATCATCAGT 14468 Query 474626 GCAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTA 474685 | || || |||||||| || |||| | ||| |||||||| | ||||||||| Sbjct 14467 GTAAACTACTTAGGTGAAAAGAAGGAATTCCATGCTGAAGAAATTTCTGCTATGGTTTTA 14408 Query 474686 GCCAAAATGAAACAAACCGCGAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATT 474745 || ||||| | | | | |||| | || | || | | | || ||| || Sbjct 14407 CAAAAGATGAAGGAGATCTCTGAAGCATACTTGGGTCGCCAAATTAAGAACGCTGTAGTT 14348 Query 474746 ACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATT 474805 ||||||||||| ||||| ||||| || || ||||||||||| || ||||| || |||| Sbjct 14347 ACTGTTCCAGCTTATTTCAATGACTCACAGCGTCAAGCAACAAAGGATGCAGGTGCAATT 14288 Query 474806 GCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGT 474865 || ||| | ||||| | | || ||||| || ||||| ||||| || ||||||||||| Sbjct 14287 GCTGGTTTGAATGTAATGAGAATCATTAACGAGCCAACTGCAGCTGCTATTGCTTATGGT 14228 Query 474866 CTTGATAAGAA 474876 ||||||||||| Sbjct 14227 CTTGATAAGAA 14217 >seq566 Length=7360 Score = 264 bits (292), Expect = 7e-65 Identities = 688/1027 (67%), Gaps = 59/1027 (6%) Strand=Plus/Plus Query 296689 GGAACTGGTTTTGTGCATATTGCTCCTTCACATGGAGAGGATGATTTCAGAGTTTGTTGT 296748 || |||||| |||| ||||| |||||| | ||| || ||||||| ||||||||| Sbjct 2030 GGTACTGGTATTGTACATATGGCTCCTGCTTTTGGTGAAGATGATTATAGAGTTTGTGTA 2089 Query 296749 CTTAATAATATTATTGATTCGAGAAATACGCGAGGCAATTTAATTGATGTA--ATTGATG 296806 |||| |||||||||| ||| | |||||| |||| || ||| Sbjct 2090 AGTAATGGTATTATTGAT------AATCATGGTACAAATTTACC--ATGTCCTATGGATT 2141 Query 296807 ATGATGGTAAATTTACAAATCAAATTCATGATTATTTTGGTATATATTTTAGGGATGCTA 296866 | |||||| |||||| | | || |||||| || |||| |||| ||| || Sbjct 2142 CTAATGGTAGATTTACTGAACCTGTTAATGATTTAAAAGGAATATGGTTTAAAGATTCTG 2201 Query 296867 ATAATCTTATTATTAAAGATTTGAAACATAAAA--AG-TTATTGTTTGATTTTAAACAAT 296923 |||| |||||| |||| || ||| | ||| || ||||| |||| || | | Sbjct 2202 ATAAAATTATTAAACAAGAATTAAAAAAAAAATCCAGATTATTAACTGATAATACA---T 2258 Query 296924 ACAAACATTCTTATCCTTTTTGTTATAGAACAGATACTCCACTTATTTTTAAAATTTGTT 296983 | |||||||||||||| |||| ||| | ||||| || ||| | | | |||| Sbjct 2259 GTATGCATTCTTATCCTTTCTGTTGGAGATCTGATACACCT-TTACAATATAGAGCTGTT 2317 Query 296984 C-TGGTTGGTTTTTAAACGCATCaaatgaaaaattcagagaaaaaatgatgattaataat 297042 | | ||||||| | || | |||| || | ||| ||| | | ||||||||| Sbjct 2318 CCTTCTTGGTTTATTAATGT------TGAATCTTTAAAAGATAAATTATTAATTAATAAT 2371 Query 297043 tctaaaataaattGGATGCCATCAAATAT-TGGTACAAATCAT-TTTGATAATTGGTTAC 297100 |||| |||||||| ||| || ||| | | ||| | ||| |||||||||||| Sbjct 2372 GAAAAAACTAATTGGATTCCA--AATTATGTTAAAGAAAAAAGATTTCATAATTGGTTAC 2429 Query 297101 AATCTTCAGTGGATTGGTGTATTTCAAGAAGTAGATATTGGGGAACACCAATTCCAATTT 297160 | | | ||||||||| || | | | | | |||||||||||| || || || | Sbjct 2430 AGGATGCTAGAGATTGGTGTGTTAGTCGTAATCGTTTTTGGGGAACACCTATACCTATAT 2489 Query 297161 GGAAATCTGATGATGGTGAAGAAATAATTTGTATTGGTTCACTTGAAGAATTAAAAGAAT 297220 || ||| || ||| | | || | ||||||||| |||||||||||||| | Sbjct 2490 GGGTATCAGAAGATTATACAATTATTAAATGTATTGGTAGTATTGAAGAATTAAAATCTT 2549 Query 297221 TTTCAGG-AATT-----GATAAT---ATTAATGATTTACATATTGATAAAATTGATCAAA 297271 | || |||| ||||| ||||||||| ||||| | || |||||| | | Sbjct 2550 TAGCATCCAATTTAAAAGATAAAGAAATTAATGATATACATCGTCATTTTATTGATTATA 2609 Query 297272 TAAAAATTCCTTCTCGTAAAGGAAA-----AGGCATG-TTATCTCGTGTTACCGGTGTTT 297325 | |||||||| || | |||||| | || ||| | || | |||| Sbjct 2610 TTGAAATTCCTGATCCAAGAGGAAATAATTATCCACCATTAAAAAGAATTGAAGAAGTTT 2669 Query 297326 TAGATTGTTGGTTTGAATCAGGTTCTATGCCTTATGGTCAAATTCATTATCCTTTTGAAA 297385 | ||||||||||||||||| |||||||||||||||| ||| ||||||| ||||||| Sbjct 2670 TTGATTGTTGGTTTGAATCTGGTTCTATGCCTTATGCATCCATTAATTATCCATTTGAAA 2729 Query 297386 ATTCCGAAATTTTAGACACTTCACAAGATTATATTGCAGATTTTATAACAGAATCAATTG 297445 || ||| | || | | | | ||| | |||||||||| | ||| | | Sbjct 2730 ATCAAGAATTATTTAATAAT-----ATATT-TCCTGCAGATTTTGTTGGTGAAGGTTTAG 2783 Query 297446 ATCAAACAAGAGGTTGGTTTTATACTTTATTAGTTCTTTCTACAGCTATATTTAACAAAC 297505 ||||||||||||| ||||||||||| ||| | || | || ||||| ||||| | ||| Sbjct 2784 ATCAAACAAGAGGATGGTTTTATACATTAATGGTATTATCAACAGCATTATTTGATCAAC 2843 Query 297506 CAGCATTTAAAAATGTAATTGTTACAGGAATTGTTAACGCAGCTGATGGACAAAAAATGT 297565 |||| ||||||||| | ||||||| || | ||| ||| ||||||| ||||||||| Sbjct 2844 CAGCTTTTAAAAATATTATTGTTAATGGTTTAGTTTTAGCATCTGATGGTAAAAAAATGT 2903 Query 297566 CAAAAAG--TAAAGGTAATTATCCTGATCCA-AATATTTTGATGGATAAATATGGTGCAG 297622 ||||||| |||| ||||||||||||||| | || ||| | ||||||||||||||| Sbjct 2904 CAAAAAGATTAAA--AAATTATCCTGATCCATTAGATATTG-TTAATAAATATGGTGCAG 2960 Query 297623 ATACTTTACGTCTTTATTTATTATCAA--CACCTGTAGTTAAAGCCGAATCAATTAAATT 297680 || ||||| | |||||| | || || |||| || |||| ||| ||| | | | ||| Sbjct 2961 ATTCTTTAAG--ATTATTTTTAATTAATTCACCAGTTGTTAGAGCAGAAACTTTAAGATT 3018 Query 297681 TGATGAA 297687 | | ||| Sbjct 3019 TAAAGAA 3025 Score = 214 bits (236), Expect = 1e-49 Identities = 348/494 (70%), Gaps = 18/494 (4%) Strand=Plus/Plus Query 295795 GATGGACCTCCATTTGCTACAGGA--ACTATGCATTATGGACATATTTTAGTCTCAACTA 295852 |||||||||||||||||||||||| || | |||||||| ||||| | | ||| Sbjct 1199 GATGGACCTCCATTTGCTACAGGATTACCA--CATTATGGTCATATACTTGCAGGTACTG 1256 Query 295853 TTAAAGATACCATGACTAGATATTTAACAATGAATGGTTATCAAGTTAATATGGGAATTG 295912 |||||||| | || |||||| ||| || || ||| | | | | || ||| Sbjct 1257 TTAAAGATGTAGTTACAAGATATGCAACTCAAAAAGGATATTATTGTGAAAGAAGATTTG 1316 Query 295913 GTTGGGATTGCCATGGAGTTCCAATTGAA-ATG---TTGGCTaaaaaaaCTATCGGATAT 295968 | ||||||||||||||| | ||| | ||| ||| ||| | |||| || | || Sbjct 1317 GATGGGATTGCCATGGATTACCAGTAGAACATGAAATTG-----ATAAACAATT--AAAT 1369 Query 295969 ATCACAA--AGA-AAGATTTATTGGAATACGGTATTGATCGTCATAATGATATTTGTCGT 296025 ||||||| ||| ||||| | || | | ||||| ||| | ||||||| ||| | Sbjct 1370 ATCACAAGTAGAGAAGATGTTTTAAATAAAGGTATAGATTTTTATAATGAATCATGTAGA 1429 Query 296026 GATATGGTATTAAAATGTACTGATAAATGGTATTCTGATTTTGAGAGAATTGGAAGATGG 296085 || ||||||| || |||| | ||||| | || | |||| ||| ||||||||| Sbjct 1430 TCAATTGTATTAAGATATACTCAAGAATGGAAATCAACTGTTGAAAGAGTTGGAAGATTA 1489 Query 296086 ATTGATATTAATAATGAATATAAAACAATGGATAAAAATTTTATGGAATCTGTTATTTGG 296145 || ||| || |||||| |||||||| |||||| |||||| ||| || |||| ||| Sbjct 1490 ATCGATTTTGATAATGGTTATAAAACTATGGATTTAAATTTCATGCAAACTGTATGGTGG 1549 Query 296146 TCATTTAAACAACTTTATGAAAAGGAAATGATTTTTGAAGGTTATAAAGTTATGCCTTAT 296205 |||||||||||||| ||| ||| | | ||| | || ||||| ||| ||||| ||| Sbjct 1550 GTATTTAAACAACTTTTTGATAAGAATCTTGTTTATAGAGCTTATAGAGTAATGCCATAT 1609 Query 296206 TCTACTGGTTGCAATACACCATTATCTCATTTTGAGGCAAAACAAAATTATAAAGAGATT 296265 ||||| | || ||||||||||||| ||||||| || |||||||||||| || Sbjct 1610 TCTACAGCATGTGCTACACCATTATCTAATTTTGAATGTAATTTAAATTATAAAGATGTT 1669 Query 296266 ATTGATCCATCTGT 296279 | |||||||||||| Sbjct 1670 AATGATCCATCTGT 1683 >seq533 Length=19963 Score = 228 bits (252), Expect = 5e-54 Identities = 397/564 (70%), Gaps = 20/564 (4%) Strand=Plus/Plus Query 474332 ATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTA 474391 |||||||| |||||||| |||||||| ||||| | | | | | ||||||| |||| Sbjct 11857 ATTGGTATCGATTTAGGTACTACTTATTCATGTGTTGGTATCTACAAGAATGGTAGAGTA 11916 Query 474392 GAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAA 474451 || || ||| | ||||| ||||||||| | | |||||||||||||| || || ||||| Sbjct 11917 GAGATTATTCCAAATGAACAAGGTAATCGTATTACACCATCATATGTATCATTCACTGAT 11976 Query 474452 ACTGA-ACATCTTATTGGAGATGCTGCTAAATATCAAGCTGC-ATCTAATCCTGTTAATA 474509 ||| | || | ||||| || | || || |||||||| | ||| ||||| ||| | | Sbjct 11977 GATGAGAGAT-TGATTGGTGAATCAGCCAAGAATCAAGCTACTATC-AATCCAGTTCAGA 12034 Query 474510 CTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTT---GATGATACCACTGTCCAAT 474566 || | || |||| || ||| | ||||||||| ||| |||||| || |||||| Sbjct 12035 CTTTGTTCGATGTAAAGAGACTTATTGGTCGTCGCTTTAAGGATGATTCC---GTCCAAA 12091 Query 474567 CTGATATGCGTCATTGG--CCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGA 474624 |||| | | ||| || | | || | || || | | | || || || ||| | Sbjct 12092 AGGATAAGACT--TTGCTACCATATGAGATTATTAACAAAGATAGCAAGCCTTACATACA 12149 Query 474625 AGCAATACACGCA--GGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTT 474682 || | | | ||||| | || ||||| | || ||| | |||| | ||||| Sbjct 12150 AGT--TTCTGTTAAGGGTGAGAAGAAGCAATTAGCCCCAGAAGAGGTTTCAGCTATGGTC 12207 Query 474683 TTAGCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGT 474741 || | ||| ||||| ||| || ||| | ||||| || | ||||||| ||||||| Sbjct 12208 TTGGTCAAGATGAAGGAAATTGCTGAGG-CTTATCTCGGTAAGGAAGTAAAGCATGCAGT 12266 Query 474742 AATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAG 474801 |||||||| ||||| || ||||||||| |||| ||||| || || || ||||| || Sbjct 12267 TATTACTGTCCCAGCTTACTTTAATGATGCTCAGCGTCAGGCTACCAAGGATGCTGGTGC 12326 Query 474802 AATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTA 474861 ||||| ||| | ||||| | |||||||||||||| ||||||||||| ||| |||||| Sbjct 12327 TATTGCCGGTTTGAATGTAATTCGTATTATTAATGAGCCAACAGCAGCAGCAATTGCTTT 12386 Query 474862 TGGTCTTGATAAGAATTCTGACAA 474885 |||| | || ||||| |||| || Sbjct 12387 TGGTTTGGACAAGAAGGCTGAGAA 12410 Score = 138 bits (152), Expect = 7e-27 Identities = 261/382 (68%), Gaps = 13/382 (3%) Strand=Plus/Plus Query 475793 AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAA 475852 || || |||||||| || || ||||| ||||| || ||||| | ||| ||| ||||| || Sbjct 12922 AACCCAGATGAAGCCGTCGCTTATGGTGCTGCCGTACAAGCTGGTATCTTAGCAGGTGAA 12981 Query 475853 TCAGACG--AGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTC 475910 | || || | | | || ||||| | |||| ||||| | | |||||| Sbjct 12982 ---GGCGGTAGTGATTTATTATTATTGGA--TGTT------ACTCCTTTAACTTTAGGTA 13030 Query 475911 TTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCA 475970 |||| || ||||| || ||||||| || || |||| ||||| ||| | | ||| || Sbjct 13031 TTGAGACTGTTGGTGGAGTTATGACAAAGCTCATTGGTAGAAACACTGTTGTTCCAACCA 13090 Query 475971 AAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCT 476030 | || |||| || ||||| |||||||| || ||||| ||||| | | Sbjct 13091 AGAAGAGCCAAGTTTTCAGTACTTACCAAGATAATCAGCCAGCTGTACTTATCCAGGTTT 13150 Query 476031 TTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAG 476090 ||| ||||| | | | ||||| ||||| || ||||||| || | ||| | Sbjct 13151 ATGAGGGTGAGCGTCCAATGACTAAGGATAACAATCTCCTTGGAAAATTCGAGCTTTCTG 13210 Query 476091 GTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAA 476150 | || || || ||||| ||||| ||||| |||||||| ||||||||||| |||||| | Sbjct 13211 GAATCCCACCAGCTCCAAGAGGTGTTCCCCAAATTGAGGTTACTTTTGAAATTGATACTG 13270 Query 476151 ATGGTATTCTTAATGTTACTGC 476172 |||||||| | | |||| ||| Sbjct 13271 ATGGTATTTTACAAGTTAGTGC 13292 >seq424 Length=41796 Score = 147 bits (162), Expect = 1e-29 Identities = 132/166 (80%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 817098 TAGATTTTTCATCTCCAAATATTGCAAAGGAAATGCATATTGGACACTTGAGATCTACAA 817157 ||||||| ||||| ||||| ||||| || ||||||||| |||||||||| |||||||||| Sbjct 5724 TAGATTTCTCATCACCAAACATTGCCAAAGAAATGCATGTTGGACACTTAAGATCTACAA 5665 Query 817158 TAATTGGTGAATCTCTTTGTAGAATATATGAATTTTGTGGATGTGAAGTACAAAGAATAA 817217 | |||||||| | |||||||| ||||| || |||| ||||||| |||| | | Sbjct 5664 TTATTGGTGATACAACATGTAGAATTCTTGAATATTTAGGATTTGAAGTATTAAGAGTTA 5605 Query 817218 ATCATATTGGTGATTGGGGAACACAATTTGGTATGTTAATTGCATA 817263 |||| |||| |||||||| || |||||||| ||| | |||| ||| Sbjct 5604 ATCACGTTGGAGATTGGGGTACTCAATTTGGCATGCTTATTGAATA 5559 >seq245 Length=10549 Score = 141 bits (156), Expect = 6e-28 Identities = 338/505 (67%), Gaps = 17/505 (3%) Strand=Plus/Minus Query 355249 CCAGTGCCAATACCTTCTGTTCCATTAACTAAAATCATTGGAATTACAGGTACATAAAAT 355308 || || ||||| || || || ||||| || |||||||||||||||| || || ||| || Sbjct 3294 CCTGTACCAATTCCATCAGTACCATTTACCAAAATCATTGGAATTATTGGAACGTAATAT 3235 Query 355309 ACTGGTTCAATCATTTTATTATCTTCAAATTGAT--GTTGCAATACATCAAAATCATGTT 355366 | |||||||| || ||| ||| || || ||| |||| | | |||| | Sbjct 3234 AAAGGTTCAATTTGTTGTCCATCATCATATAAATAAGTT--AATAAAGGATCATCAGCCT 3177 Query 355367 GTATGAAAATATATTTAGTTAATTGATTGAGTTGTGTGAAGATATATCGTGCA---CTTG 355423 | |||||||||| |||| ||| | || | || || ||||| || ||| |||| Sbjct 3176 CTGGGAAAATATATCTAGTCCATTTAGATAGCTTAGTAAATATATAACGAGCAGCACTTG 3117 Query 355424 CATTATCTTTGCCTCCACTTAATCTTGTACCAAATTGACCATTGGGAAGTAATAAATTTA 355483 ||| |||| || || | ||| |||||||||||||| || ||||| ||||| Sbjct 3116 CAT---CTTTTCCACCTTCTTTTCTACTACCAAATTGACCACATGGTTCTAATAGATTTA 3060 Query 355484 TGTTGTTACTTCCAACATAATTTTGTGCCATTTTTATTATAGTTTCAGTCATTGACTGTT 355543 || |||||||||||| ||||||| ||||| || | ||||| || ||| || Sbjct 3059 GATTATTACTTCCAACAAAATTTTGAGCCATATTAACAATAGTACTTTGCAATGATGATT 3000 Query 355544 CTCCATGATGATATTTAGTTCTTTTCGAAACTGCACCTTGTAATTCAGATACTTTAATTT 355603 ||||||||||||| | | || | ||| ||| ||||| | ||||||| Sbjct 2999 CTCCATGATGATAAGCACTATGTTCAGCAACATAACCAGCTAATTGTGCAACTTTAA--- 2943 Query 355604 CTTCTTTATAAATACCTTCTTCCTCTGAACCATACAATACTTTTCTTTGAGATGGTTTAA 355663 ||| |||| || || || || || | | |||||||||||| ||||| | Sbjct 2942 GTTCATTATTAAGCTTTTTTTTAAATGTTGCAAAAAGTACTTTTCTTTGTCCAGGTTTTA 2883 Query 355664 GACCGTCAGCTATGTTAGGTATTGATCTCATATTATC--ATCGACTGAAAATGAAATAAG 355721 ||| || || || || || ||||| || |||| ||| ||| |||| | | ||| Sbjct 2882 AACCATCTAATAAATTTGGAATAGATCTAGTAGTATCATATCTACT--AAATAATACAAG 2825 Query 355722 TTCGCGATGAATAAAATCATAATAT 355746 ||| ||||||||||||| ||||| Sbjct 2824 TTCTTTATGAATAAAATCAAAATAT 2800 >seq662 Length=1762 Score = 140 bits (154), Expect = 2e-27 Identities = 270/397 (68%), Gaps = 16/397 (4%) Strand=Plus/Minus Query 475790 GTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGT 475849 || || ||||| |||||||||||| ||||||||| | ||||| | | |||| ||| Sbjct 1108 GTTAACCCTGACGAAGCTGTTGCAATGGGAGCTGCTATACAAGCTGGTGTTTTGAAAGGG 1049 Query 475850 CAATCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGT 475909 |||| | || || || | | | ||||| || || | || |||||| Sbjct 1048 ---------GAGA---TCAAGGATCTTTTGTTACTCGACGTTACACCCTTATCTTTAGGT 1001 Query 475910 CTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGC 475969 ||||||| | || || || | ||| | ||| |||||||||| | || || Sbjct 1000 ATTGAAACTTTGGGTGGAGTTTTTACTCGATTAATTAACAGAAATACCACAATACCTACT 941 Query 475970 AAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATC 476029 ||||| ||||||| |||||| | | || |||||||| || || || | Sbjct 940 AAAAAGAGCCAAGTATTCTCCACTGCTGCAGACAATCAAACTCAAGTTGGAATTAAAGTT 881 Query 476030 TTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTT--AATCTTG 476087 || |||| |||||| |||| || |||||||| |||||| ||| ||| || Sbjct 880 TTCCAAGGAGAAAGAGAATTTGCTGCTGATAATAAGTTGCTTGGACAATTTGAAATGATG 821 Query 476088 AAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATG 476147 || |||||||| || |||||||| || |||||||||||||| || ||||||||||||| Sbjct 820 --GGAATTCCTCCAGCACCCAGAGGGGTACCTCAAATTGAAGTCACCTTTGATATTGATG 763 Query 476148 CAAATGGTATTCTTAATGTTACTGCTTGTGATAAATC 476184 ||||||| ||| | |||||| ||| |||||| || Sbjct 762 CAAATGGAATTATGAATGTTGGTGCAATTGATAAGTC 726 Score = 96.9 bits (106), Expect = 2e-14 Identities = 91/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 474749 GTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCA 474808 || ||||| || |||||||||||||| |||||||||||||| ||||| || || ||| Sbjct 1762 GTGCCAGCTTACTTTAATGATTCTCAGCGTCAAGCAACTAAGGATGCTGGCTCTATAGCA 1703 Query 474809 GGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGG 474864 || | ||||| | | || |||||||| ||||||||||| || ||||| || || Sbjct 1702 GGCTTAAATGTAACAAGAATCATTAATGAGCCAACAGCAGCGGCTCTTGCATACGG 1647 >seq191 Length=60473 Score = 129 bits (142), Expect = 4e-24 Identities = 254/365 (70%), Gaps = 18/365 (5%) Strand=Plus/Plus Query 269113 CTCGTTAACAATTGTGTCGG-TCCACGCGCTCTAGAGTGAGTTTTATCGCCCACCATTTG 269171 || |||| || ||||| | | ||| | ||||||| ||| |||||||| | ||||| || Sbjct 1826 CTGGTTAGCA-TTGTGACTGCTCCTCTAGCTCTAGCATGAATTTTATCGTCAACCATATG 1884 Query 269172 TTTTAAACGCTGATAATATGTCGGACCAATAAATATTTT-GACATGCATTTTTTCTCCCG 269230 ||||| | |||||| || || || |||||||| ||| | ||| | || | | | ||||| Sbjct 1885 TTTTAGTCTCTGATAGTAAGTTGGCCCAATAAAGATTCTCGAC-TCCAATCTCTTTCCCG 1943 Query 269231 TCATACCATTTGTCATTGTTTCATTTCCCCATGCTTC--ATATCCG----TATG-AAACT 269283 | ||||| |||| ||||||||| || ||| | | ||| |||| |||| Sbjct 1944 TATGGCCATTGTACATTACTTCATTTCC--ATTTTTCTGAAACCCGGAACTATGTAAACG 2001 Query 269284 AGTTCATCATTTATTTTATTAATATCTACACCTGTAAATGGTGTCGCATCACCATATACT 269343 | || || | || | | || | | ||||| || || |||||||| | | | Sbjct 2002 GCTAGAT-ATCTCTTCAACTGTAATTTTC----GTAAAAGGAGTTGCATCACCCTCCAAT 2056 Query 269344 CCTTTAATAGCACATACTTTTCCTAATAGACATTCAATCAATTGTCCAATGGTCATACGT 269403 |||| ||| || || |||| || | ||||||||||| || || ||||| |||||||| Sbjct 2057 CCTTGAATTGCGCACGCTTTGCCAAGCAGACATTCAATTAAATGGCCAATTGTCATACGC 2116 Query 269404 TTTGGCATACAATTAGGATTAATAATAATATCTGGCACAAGTCCAGATTTAGTAAATGGC 269463 || ||| || |||||| |||||||| ||||| | || ||| || ||||||||| Sbjct 2117 GAAGGAATAGCATGAGGATTCATAATAATGTCTGGAATAATCCCATCTTGTGTAAATGGC 2176 Query 269464 ATATC 269468 ||||| Sbjct 2177 ATATC 2181 >seq332 Length=38429 Score = 122 bits (134), Expect = 6e-22 Identities = 133/177 (75%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 480593 ATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTG 480652 ||| || |||| ||||||||| |||||| | ||||||||||||||| || ||||| || Sbjct 24493 ATTGTAGTCAGATAGAGTTCTACCATCTTCCAATTGCTTTCCAGCAAAGATCAGACGCTG 24552 Query 480653 TTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATC 480712 ||||||||||||||| || ||||| || || |||||| || ||| ||||||||||| Sbjct 24553 TTGATCAGGAGGAATACCCTCCTTATCCTGGATCTTTGCCTTTACATTCTCAATAGTATC 24612 Query 480713 AGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || | ||| | || || || || || || | ||| || || |||||||| Sbjct 24613 GGAAGGTTCAACTTCCAATGTGATGGTCTTTCCTGTTAAAGTTTTGACAAAAATTTG 24669 >seq622 Length=51430 Score = 113 bits (124), Expect = 3e-19 Identities = 247/367 (67%), Gaps = 16/367 (4%) Strand=Plus/Minus Query 894979 AATaaaaaaaTGGATTCTGATCTTGATAAAATAAAAGATGTAGGTTTATATTTCATTGAA 895038 ||||| || |||| | ||||||||| ||||| || ||| ||| ||||||| || | Sbjct 48034 AATAATAAGATGGGTGGTGATCTTGAAAAAATTAAGATTGTTGGTGAATATTTCGTTCAC 47975 Query 895039 GTTTTTAAAGCATGTGGTATTAATATGTCTGAAACAAAGTTTATTTGGTCAAGTGATTTA 895098 | | || || || || ||||| | | || ||| ||||| || |||||| Sbjct 47974 ATATGGAAGGCTGCAGGAATGGATATGACAAATGTAAGATTTGTTTGGGCATCTGATTTT 47915 Query 895099 TTTAATA---AAAATCCTGAAAAATATTTTACAAGATTGTTAGATATTTCCGAAGAAACC 895155 ||||| || || || | | |||| |||| | || |||||||| ||||| Sbjct 47914 ATTAATGGGGAAGATTCTAATGAGTATTGGTTAAGAGTTTTTGATATTTCT--AGAAAGT 47857 Query 895156 TC--TCTTTCCAGGAGTAAAAGATGTTGTCAAATTATGGGTCGAAAAGACGGAGATGAAT 895213 | | || | || | |||||||||||| ||||||||||| || |||| |||||| Sbjct 47856 TTAATATTACTAGAATTAAAAGATGTTGCCAAATTATGGGAAGACAAGAAAATGATGAAC 47797 Query 895214 TATCTGTTTCTCAAATTATTTATCCTTGCATGCAAGTTGCAGATATTTTTGAACTCGAAC 895273 | | | || | | ||||||| ||||||||| ||| ||||| || ||||| Sbjct 47796 AACCGTGTGCTTCAGTATTTTATCCATGCATGCAATGTGCTGATATATTCCAACTC---- 47741 Query 895274 CTGAAGGAATAGATATTTGTCAATTAGGTGTTGATCAACGTAAAGTTAATATGCTCGCTC 895333 |||| ||||||||| || |||||| | |||||| | |||||||| ||||| ||| Sbjct 47740 ---AAGG--CAGATATTTGCCAGTTAGGTATGGATCAAAGAAAAGTTAACATGCTTGCTA 47686 Query 895334 TCGAATA 895340 ||||| Sbjct 47685 GAGAATA 47679 >seq842 Length=1072 Score = 91.5 bits (100), Expect = 1e-12 Identities = 91/118 (77%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 474681 TTTTAGCCAAAATGAAACAAACCGCGAGCTCATATCTTGGACAAGAAGTAACTGATGCAG 474740 |||| | ||||||||| |||| || | |||||||| || |||| |||| | Sbjct 127 TTTTGGAAAAAATGAAAGAAACTGCCGAAACTTATCTTGGTAGAGGTGTAAAGCATGCTG 68 Query 474741 TAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGG 474798 | |||||||| ||||| || |||||||||||||| |||||||||||||| ||||| || Sbjct 67 TTATTACTGTGCCAGCTTACTTTAATGATTCTCAGCGTCAAGCAACTAAGGATGCTGG 10 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268133045139248