Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20parvum_20[genbank_20GCA_5F002093595.1_202017-04- 14] 1,076 sequences; 9,111,587 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq332 152 9e-32 >seq332 Length=38429 Score = 152 bits (168), Expect = 9e-32 Identities = 176/237 (74%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193130 TATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTC 193189 || ||| ||||| | || | ||| | |||||| || | ||| || ||||| ||||| Sbjct 24442 TACACCGCCTCTAAGTCTTAATACTAAATGCAAAGTGGACTCCTTCTGGATATTGTAGTC 24501 Query 193190 GGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGG 193249 |||| |||||| ||| || ||||| ||||| ||||| || | | |||||||||||| Sbjct 24502 AGATAGAGTTCTACCATCTTCCAATTGCTTTCCAGCAAAGATCAGACGCTGTTGATCAGG 24561 Query 193250 AGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTC 193309 ||| || || || ||||| || || || | |||| ||| |||||||||||||| || Sbjct 24562 AGGAATACCCTCCTTATCCTGGATCTTTGCCTTTACATTCTCAATAGTATCGGAAGGTTC 24621 Query 193310 AACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTTATT 193366 |||||| | || || || || ||||||| ||||| ||||| |||||||| || || Sbjct 24622 AACTTCCAATGTGATGGTCTTTCCTGTTAAAGTTTTGACAAAAATTTGCATCTTCTT 24678 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899642299648320