Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20parvum_20[genbank_20GCA_5F002093595.1_202017-04- 14] 1,076 sequences; 9,111,587 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq332 152 1e-31 seq480 96.9 7e-15 >seq332 Length=38429 Score = 152 bits (168), Expect = 1e-31 Identities = 162/214 (76%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 282890 TACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTC 282949 ||| | ||| || ||| || || ||||| |||||||||| || || | ||||| || Sbjct 24463 TACTAAATGCAAAGTGGACTCCTTCTGGATATTGTAGTCAGATAGAGTTCTACCATCTTC 24522 Query 282950 TAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTG 283009 | ||| || || |||||||||| ||| ||||| ||| |||||||||||||| || || Sbjct 24523 CAATTGCTTTCCAGCAAAGATCAGACGCTGTTGATCAGGAGGAATACCCTCCTTATCCTG 24582 Query 283010 GATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTT 283069 ||||||||| ||||| | || ||||| || |||| ||| ||||| | ||||| ||||| Sbjct 24583 GATCTTTGCCTTTACATTCTCAATAGTATCGGAAGGTTCAACTTCCAATGTGATGGTCTT 24642 Query 283070 ACCCGTCAAAGTCTTAACGAATATCTGCATTTTC 283103 || || ||||| || || || || ||||| ||| Sbjct 24643 TCCTGTTAAAGTTTTGACAAAAATTTGCATCTTC 24676 >seq480 Length=4824 Score = 96.9 bits (106), Expect = 7e-15 Identities = 89/113 (79%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 282990 GGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCG 283049 || || || ||||| ||||| |||||||| || || | || || || || |||| ||| Sbjct 4821 GGGATTCCTTCCTTATCTTGAATCTTTGCCTTAACATTCTCAATTGTATCTGAAGGTTCA 4762 Query 283050 ACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 ||||| | |||||| ||||| || |||||||||||||| || |||||||| || Sbjct 4761 ACTTCCAAAGTGATAGTCTTTCCTGTCAAAGTCTTAACAAAAATCTGCATATT 4709 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046724769391704