Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20parvum_20[genbank_20GCA_5F002093605.1_202017-04- 14] 309 sequences; 9,082,089 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq285 93.3 4e-14 >seq285 Length=70399 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 118523 TCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGT 118582 ||||| || ||||| | || ||||||||||||||||||||||| | ||| | Sbjct 402 TCTCAGGACTAAGTGTAAAGTGGACTCTTTTTGAATGTTGTAATCAGAGAGAGTTCTACC 343 Query 118583 ATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTT 118642 |||||| | |||||||| || |||| | ||| || ||||| || || || || ||||| Sbjct 342 ATCCTCTAATTGTTTTCCTGCAAAGATCAAACGTTGTTGATCAGGTGGGATTCCTTCCTT 283 Query 118643 GTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCAC 118702 ||| ||| ||| ||||| | || | || || | ||| || || | || | Sbjct 282 ATCTTGAATCTTTGCCTTAACATTCTCAATTGTATCTGAAGGCTCAACTTCCAAAGTGAT 223 Query 118703 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || || |||| ||| || || ||||||||||| Sbjct 222 AGTCTTTCCTGTCAAAGTCTTAACGAAAATCTGCAT 187 Score = 84.2 bits (92), Expect = 2e-11 Identities = 111/154 (72%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || | | |||||| || || || | ||||||||||||||||||||||| || Sbjct 187 TACCACCTCTGAGTCTCAATACTAAATGTAAAGTAGACTCTTTTTGAATGTTGTAGTCAG 128 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | ||| | |||||| | |||||||| || |||| | ||| || ||||| || | Sbjct 127 AGAGAGTTCTACCATCCTCTAATTGTTTTCCTGCAAAGATTAAACGTTGTTGATCAGGTG 68 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAAC 118663 | || |||||||| ||| ||| ||| ||||| Sbjct 67 GGATTCCCTCCTTATCTTGAATCTTTGCCTTAAC 34 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433828766221828