Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20parvum_20[genbank_20GCA_5F002093605.1_202017-04- 14] 309 sequences; 9,082,089 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq247 100 2e-16 >seq247 Length=95557 Score = 100 bits (110), Expect = 2e-16 Identities = 168/240 (70%), Gaps = 5/240 (2%) Strand=Plus/Plus Query 16702 CATTTAC-CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGT 16760 || |||| || |||| || || | ||| | ||||| ||||||||||| || || |||| Sbjct 42822 CAATTACACCGCCTCTAAGTCTTAATACTAAATGCAAAGTGGACTCCTTCTGGATATTGT 42881 Query 16761 AGTCGGCCATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGT 16820 |||| | | ||| | | || |||||||| || || ||| | || || |||||||| | Sbjct 42882 AGTCAGATAGAGTTCTACCATCTTCCAATTGCTTTCCAGCAAAGATCAGACGCTGTTGAT 42941 Query 16821 CCACAGGCACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCC 16878 | ||| | ||||| || || || ||||| ||| || | | | ||| ||| Sbjct 42942 CAGGAGGAATACCCTCCTTATCCTGGATCTTTGC--CTTTACATTCTCAATAGTATCGGA 42999 Query 16879 GGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTT 16938 || || ||||| |||||||| ||||| || | |||||||||||||| ||||| || Sbjct 43000 AGGTTCAACTTCCAATGTGATGGTCTTTCCTGTTAAAGTTTTGACAAAAATTTGCATCTT 43059 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405086474463910