Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20parvum_20[genbank_20GCA_5F002093605.1_202017-04- 14] 309 sequences; 9,082,089 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq11 356 2e-92 seq294 264 7e-65 seq130 228 5e-54 seq9 147 1e-29 seq95 141 6e-28 seq266 140 2e-27 seq301 129 4e-24 seq285 123 2e-22 seq247 122 6e-22 seq141 113 3e-19 >seq11 Length=60561 Score = 356 bits (394), Expect = 2e-92 Identities = 670/974 (69%), Gaps = 27/974 (3%) Strand=Plus/Minus Query 475310 GGAACTCATGACGTAACTTTACTATCACTCGAAGATGGTCTTTTCTCTGTAAGAGCAACA 475369 || ||| ||| ||| | ||| || | | ||||||||| |||| || | ||| || Sbjct 14162 GGTACTTTTGATGTATCATTATTAACTATTGAAGATGGTATTTTTGAAGTTAAAGCTACC 14103 Query 475370 GCTGGAGATTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGTATCATGGTGTGTT 475429 ||||| ||| | || | |||||||||||||||||||| ||||| ||| || ||||| Sbjct 14102 GCTGGTGATACTCACTTGGGTGGTGAAGATTTTGATAACAGACTCGTAGAATTCTGTGTA 14043 Query 475430 GAAGATTTCAAGAGGAAAAATAAAGTT---GATCTTTCAACATCTGCTAAAGCATTAAGA 475486 ||||||||||||| || |||| || | ||| | | ||| ||||| ||| |||||| Sbjct 14042 CAAGATTTCAAGAGAAAGAATAGAGGTATGGATTTAACCACAAATGCTAGAGCTTTAAGA 13983 Query 475487 CGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTACT 475546 | || |||||| || || ||||| ||| || || | || ||| |||||||| |||| Sbjct 13982 AGACTCAGAACTCAATGCGAGCGTGCAAAGAGAACTTTGTCATCTTCTACTCAAGCTACA 13923 Query 475547 GTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGGGCTAAA 475606 |||| | ||||| || | |||||| ||||||||| | || | || |||| | Sbjct 13922 ATTGAGTTAGATTCACTCTATGAAGGTATTGATTATTCAGTTGCCATCAGTAGAGCTAGA 13863 Query 475607 TTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTCTC 475666 || ||||| | || ||||| ||| | ||| | | || ||||| |||| ||| Sbjct 13862 TTCGAAGAACTCTGCGCTGATTACTTCCGTGCAACTTTAGCTCCAGTTGAGAAAGTACTC 13803 Query 475667 AGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACA 475726 | ||| || | ||||| | || ||||| |||| | || || ||||| ||| Sbjct 13802 AAGGATGCTGGTATGGACAAGAGATCTGTACATGATGTTGTATTGGTTGGTGGTTCTACA 13743 Query 475727 AGAATTCCAAAAATAAGAGAAATGCTTTCATCATATTTTAATGGTAAAAAGTTAAATG-A 475785 | |||||||| | | || || || ||||| |||||| || | || | Sbjct 13742 CGTATTCCAAAGGTTCAGGCCTTGATTCAGGAATTCTTTAACGGTAAAGAGCCA--TGCA 13685 Query 475786 AAGTG-TAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTAT 475844 ||| | ||||| || ||||||||||| ||||| |||||||| ||||| ||||| ||| Sbjct 13684 AAGCAATCAATCCAGACGAAGCTGTTGCTTATGGTGCTGCTGTACAAGCTGCTATCTTAA 13625 Query 475845 CAGGT---CAATCA---GACG---AGAAACTAAATAATATTGTACTTGTTGACGTAACTC 475895 ||| ||||| | || || | || || ||||| | ||||| ||| Sbjct 13624 ATGGTGAGCAATCCTCTGCCGTACAGGATCTCT-TATTATTGGA--TGTTG------CTC 13574 Query 475896 CACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATA 475955 || | ||| | ||| | ||||| | ||| || ||||||| || |||||||| | |||| Sbjct 13573 CATTATCACTCGGTTTAGAAACTGCTGGTGGTGTTATGACCAAGCTTATTGAACGTAATA 13514 Query 475956 CTCCTATCCCATGCAAAAAAT-CAAAAGTATTTTCCACTTATTCTGATAATCAAACAACT 476014 | |||||||| ||||| || || |||| || | |||||| ||||||| || | | Sbjct 13513 CAACTATCCCA-GCAAAGAAGACACAAGTCTTCACTACTTATGCTGATAACCAGAGTGGT 13455 Query 476015 GTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGA 476074 || |||||| | | ||| ||||| ||| | ||||| ||||| | || ||| Sbjct 13454 GTCTTGATCCAAGTTTATGAGGGTGAGAGAGCCATGACTAAGGATAACCATCTCCTCGGA 13395 Query 476075 ACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACT 476134 | || ||||||| |||||||| || || || ||||| || || ||||||||||| || Sbjct 13394 AAGTTCCATCTTGATGGTATTCCACCAGCACCAAGAGGTGTACCACAAATTGAAGTCACC 13335 Query 476135 TTTGATATTGATGCAAATGGTATTCTTAATGTTACTGCTTGTGATAAATCTAGTAACAAG 476194 |||||||||||||| |||||||| | ||||| ||||| |||||| || | ||| Sbjct 13334 TTTGATATTGATGCTAATGGTATCTTGAATGTGTCTGCTGTTGATAAGAGTACTGGTAAG 13275 Query 476195 AGTAAAAATATAACTATTACAAACAATCGTGGTAGATTTACTGAAGAACAAATTCAACGT 476254 || | || || |||||||| ||| || |||||||| | | || | ||| ||||| Sbjct 13274 AGCAGCAAGATCACTATTACTAACGATAAGGGTAGATTATCAAAGGACGATATTGAACGT 13215 Query 476255 ATGGTTGATGAAGC 476268 |||||| |||| || Sbjct 13214 ATGGTTAATGATGC 13201 Score = 253 bits (280), Expect = 1e-61 Identities = 388/551 (70%), Gaps = 3/551 (1%) Strand=Plus/Minus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388 || ||||||||||||||||| || || ||| ||||| | ||| ||| ||| | || Sbjct 14756 GCTATTGGTATTGATTTAGGTACCACATACTCATGTGTTGGTGTATGGAGAAACGATACT 14697 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 ||||| || || | || || |||||||| | ||||||||||||||||| | ||||| Sbjct 14696 GTAGATATTGTTCCAAACGATCAAGGTAACCGTACAACACCATCATATGTAGCATTTACA 14637 Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAAT 474508 |||||||| | ||||||||| ||||| || || | |||| ||| || || | ||| Sbjct 14636 GAAACTGAGCGTCTTATTGGTGATGCAGCAAAGAACCAAGTTGCTAGAAACCCAGAAAAT 14577 Query 474509 ACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCT 474568 || |||||||||||||| | | |||||| | || ||||||||| | || ||| | Sbjct 14576 ACAGTTTTTGATGCTAAACGTCTTATTGGTAGAAAGTTTGATGATCAGGCAGTACAAAGT 14517 Query 474569 GATATGCGTCATTGGCCTTTTAAGGT-GATAAATGT--TGGTGGTAAACCATATATAGAA 474625 |||||| ||| ||||| ||||| || | || | || | || ||| || Sbjct 14516 GATATGACTCACTGGCCATTTAAAGTAGTTAGAGGTCCAAAGGACAAGCCAATCATCAGT 14457 Query 474626 GCAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTA 474685 | || || |||||||| || |||| | ||| |||||||| | ||||||||| Sbjct 14456 GTAAACTACTTAGGTGAAAAGAAGGAATTCCATGCTGAAGAAATTTCTGCTATGGTTTTA 14397 Query 474686 GCCAAAATGAAACAAACCGCGAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATT 474745 || ||||| | | | | |||| | || | || | | | || ||| || Sbjct 14396 CAAAAGATGAAGGAGATCTCTGAAGCATACTTGGGTCGCCAAATTAAGAACGCTGTAGTT 14337 Query 474746 ACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATT 474805 ||||||||||| ||||| ||||| || || ||||||||||| || ||||| || |||| Sbjct 14336 ACTGTTCCAGCTTATTTCAATGACTCACAGCGTCAAGCAACAAAGGATGCAGGTGCAATT 14277 Query 474806 GCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGT 474865 || ||| | ||||| | | || ||||| || ||||| ||||| || ||||||||||| Sbjct 14276 GCTGGTTTGAATGTAATGAGAATCATTAACGAGCCAACTGCAGCTGCTATTGCTTATGGT 14217 Query 474866 CTTGATAAGAA 474876 ||||||||||| Sbjct 14216 CTTGATAAGAA 14206 >seq294 Length=91018 Score = 264 bits (292), Expect = 7e-65 Identities = 688/1027 (67%), Gaps = 59/1027 (6%) Strand=Plus/Plus Query 296689 GGAACTGGTTTTGTGCATATTGCTCCTTCACATGGAGAGGATGATTTCAGAGTTTGTTGT 296748 || |||||| |||| ||||| |||||| | ||| || ||||||| ||||||||| Sbjct 1689 GGTACTGGTATTGTACATATGGCTCCTGCTTTTGGTGAAGATGATTATAGAGTTTGTGTA 1748 Query 296749 CTTAATAATATTATTGATTCGAGAAATACGCGAGGCAATTTAATTGATGTA--ATTGATG 296806 |||| |||||||||| ||| | |||||| |||| || ||| Sbjct 1749 AGTAATGGTATTATTGAT------AATCATGGTACAAATTTACC--ATGTCCTATGGATT 1800 Query 296807 ATGATGGTAAATTTACAAATCAAATTCATGATTATTTTGGTATATATTTTAGGGATGCTA 296866 | |||||| |||||| | | || |||||| || |||| |||| ||| || Sbjct 1801 CTAATGGTAGATTTACTGAACCTGTTAATGATTTAAAAGGAATATGGTTTAAAGATTCTG 1860 Query 296867 ATAATCTTATTATTAAAGATTTGAAACATAAAA--AG-TTATTGTTTGATTTTAAACAAT 296923 |||| |||||| |||| || ||| | ||| || ||||| |||| || | | Sbjct 1861 ATAAAATTATTAAACAAGAATTAAAAAAAAAATCCAGATTATTAACTGATAATACA---T 1917 Query 296924 ACAAACATTCTTATCCTTTTTGTTATAGAACAGATACTCCACTTATTTTTAAAATTTGTT 296983 | |||||||||||||| |||| ||| | ||||| || ||| | | | |||| Sbjct 1918 GTATGCATTCTTATCCTTTCTGTTGGAGATCTGATACACCT-TTACAATATAGAGCTGTT 1976 Query 296984 C-TGGTTGGTTTTTAAACGCATCaaatgaaaaattcagagaaaaaatgatgattaataat 297042 | | ||||||| | || | |||| || | ||| ||| | | ||||||||| Sbjct 1977 CCTTCTTGGTTTATTAATGT------TGAATCTTTAAAAGATAAATTATTAATTAATAAT 2030 Query 297043 tctaaaataaattGGATGCCATCAAATAT-TGGTACAAATCAT-TTTGATAATTGGTTAC 297100 |||| |||||||| ||| || ||| | | ||| | ||| |||||||||||| Sbjct 2031 GAAAAAACTAATTGGATTCCA--AATTATGTTAAAGAAAAAAGATTTCATAATTGGTTAC 2088 Query 297101 AATCTTCAGTGGATTGGTGTATTTCAAGAAGTAGATATTGGGGAACACCAATTCCAATTT 297160 | | | ||||||||| || | | | | | |||||||||||| || || || | Sbjct 2089 AGGATGCTAGAGATTGGTGTGTTAGTCGTAATCGTTTTTGGGGAACACCTATACCTATAT 2148 Query 297161 GGAAATCTGATGATGGTGAAGAAATAATTTGTATTGGTTCACTTGAAGAATTAAAAGAAT 297220 || ||| || ||| | | || | ||||||||| |||||||||||||| | Sbjct 2149 GGGTATCAGAAGATTATACAATTATTAAATGTATTGGTAGTATTGAAGAATTAAAATCTT 2208 Query 297221 TTTCAGG-AATT-----GATAAT---ATTAATGATTTACATATTGATAAAATTGATCAAA 297271 | || |||| ||||| ||||||||| ||||| | || |||||| | | Sbjct 2209 TAGCATCCAATTTAAAAGATAAAGAAATTAATGATATACATCGTCATTTTATTGATTATA 2268 Query 297272 TAAAAATTCCTTCTCGTAAAGGAAA-----AGGCATG-TTATCTCGTGTTACCGGTGTTT 297325 | |||||||| || | |||||| | || ||| | || | |||| Sbjct 2269 TTGAAATTCCTGATCCAAGAGGAAATAATTATCCACCATTAAAAAGAATTGAAGAAGTTT 2328 Query 297326 TAGATTGTTGGTTTGAATCAGGTTCTATGCCTTATGGTCAAATTCATTATCCTTTTGAAA 297385 | ||||||||||||||||| |||||||||||||||| ||| ||||||| ||||||| Sbjct 2329 TTGATTGTTGGTTTGAATCTGGTTCTATGCCTTATGCATCCATTAATTATCCATTTGAAA 2388 Query 297386 ATTCCGAAATTTTAGACACTTCACAAGATTATATTGCAGATTTTATAACAGAATCAATTG 297445 || ||| | || | | | | ||| | |||||||||| | ||| | | Sbjct 2389 ATCAAGAATTATTTAATAAT-----ATATT-TCCTGCAGATTTTGTTGGTGAAGGTTTAG 2442 Query 297446 ATCAAACAAGAGGTTGGTTTTATACTTTATTAGTTCTTTCTACAGCTATATTTAACAAAC 297505 ||||||||||||| ||||||||||| ||| | || | || ||||| ||||| | ||| Sbjct 2443 ATCAAACAAGAGGATGGTTTTATACATTAATGGTATTATCAACAGCATTATTTGATCAAC 2502 Query 297506 CAGCATTTAAAAATGTAATTGTTACAGGAATTGTTAACGCAGCTGATGGACAAAAAATGT 297565 |||| ||||||||| | ||||||| || | ||| ||| ||||||| ||||||||| Sbjct 2503 CAGCTTTTAAAAATATTATTGTTAATGGTTTAGTTTTAGCATCTGATGGTAAAAAAATGT 2562 Query 297566 CAAAAAG--TAAAGGTAATTATCCTGATCCA-AATATTTTGATGGATAAATATGGTGCAG 297622 ||||||| |||| ||||||||||||||| | || ||| | ||||||||||||||| Sbjct 2563 CAAAAAGATTAAA--AAATTATCCTGATCCATTAGATATTG-TTAATAAATATGGTGCAG 2619 Query 297623 ATACTTTACGTCTTTATTTATTATCAA--CACCTGTAGTTAAAGCCGAATCAATTAAATT 297680 || ||||| | |||||| | || || |||| || |||| ||| ||| | | | ||| Sbjct 2620 ATTCTTTAAG--ATTATTTTTAATTAATTCACCAGTTGTTAGAGCAGAAACTTTAAGATT 2677 Query 297681 TGATGAA 297687 | | ||| Sbjct 2678 TAAAGAA 2684 Score = 214 bits (236), Expect = 1e-49 Identities = 348/494 (70%), Gaps = 18/494 (4%) Strand=Plus/Plus Query 295795 GATGGACCTCCATTTGCTACAGGA--ACTATGCATTATGGACATATTTTAGTCTCAACTA 295852 |||||||||||||||||||||||| || | |||||||| ||||| | | ||| Sbjct 858 GATGGACCTCCATTTGCTACAGGATTACCA--CATTATGGTCATATACTTGCAGGTACTG 915 Query 295853 TTAAAGATACCATGACTAGATATTTAACAATGAATGGTTATCAAGTTAATATGGGAATTG 295912 |||||||| | || |||||| ||| || || ||| | | | | || ||| Sbjct 916 TTAAAGATGTAGTTACAAGATATGCAACTCAAAAAGGATATTATTGTGAAAGAAGATTTG 975 Query 295913 GTTGGGATTGCCATGGAGTTCCAATTGAA-ATG---TTGGCTaaaaaaaCTATCGGATAT 295968 | ||||||||||||||| | ||| | ||| ||| ||| | |||| || | || Sbjct 976 GATGGGATTGCCATGGATTACCAGTAGAACATGAAATTG-----ATAAACAATT--AAAT 1028 Query 295969 ATCACAA--AGA-AAGATTTATTGGAATACGGTATTGATCGTCATAATGATATTTGTCGT 296025 ||||||| ||| ||||| | || | | ||||| ||| | ||||||| ||| | Sbjct 1029 ATCACAAGTAGAGAAGATGTTTTAAATAAAGGTATAGATTTTTATAATGAATCATGTAGA 1088 Query 296026 GATATGGTATTAAAATGTACTGATAAATGGTATTCTGATTTTGAGAGAATTGGAAGATGG 296085 || ||||||| || |||| | ||||| | || | |||| ||| ||||||||| Sbjct 1089 TCAATTGTATTAAGATATACTCAAGAATGGAAATCAACTGTTGAAAGAGTTGGAAGATTA 1148 Query 296086 ATTGATATTAATAATGAATATAAAACAATGGATAAAAATTTTATGGAATCTGTTATTTGG 296145 || ||| || |||||| |||||||| |||||| |||||| ||| || |||| ||| Sbjct 1149 ATCGATTTTGATAATGGTTATAAAACTATGGATTTAAATTTCATGCAAACTGTATGGTGG 1208 Query 296146 TCATTTAAACAACTTTATGAAAAGGAAATGATTTTTGAAGGTTATAAAGTTATGCCTTAT 296205 |||||||||||||| ||| ||| | | ||| | || ||||| ||| ||||| ||| Sbjct 1209 GTATTTAAACAACTTTTTGATAAGAATCTTGTTTATAGAGCTTATAGAGTAATGCCATAT 1268 Query 296206 TCTACTGGTTGCAATACACCATTATCTCATTTTGAGGCAAAACAAAATTATAAAGAGATT 296265 ||||| | || ||||||||||||| ||||||| || |||||||||||| || Sbjct 1269 TCTACAGCATGTGCTACACCATTATCTAATTTTGAATGTAATTTAAATTATAAAGATGTT 1328 Query 296266 ATTGATCCATCTGT 296279 | |||||||||||| Sbjct 1329 AATGATCCATCTGT 1342 >seq130 Length=131589 Score = 228 bits (252), Expect = 5e-54 Identities = 397/564 (70%), Gaps = 20/564 (4%) Strand=Plus/Plus Query 474332 ATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTA 474391 |||||||| |||||||| |||||||| ||||| | | | | | ||||||| |||| Sbjct 41247 ATTGGTATCGATTTAGGTACTACTTATTCATGTGTTGGTATCTACAAGAATGGTAGAGTA 41306 Query 474392 GAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAA 474451 || || ||| | ||||| ||||||||| | | |||||||||||||| || || ||||| Sbjct 41307 GAGATTATTCCAAATGAACAAGGTAATCGTATTACACCATCATATGTATCATTCACTGAT 41366 Query 474452 ACTGA-ACATCTTATTGGAGATGCTGCTAAATATCAAGCTGC-ATCTAATCCTGTTAATA 474509 ||| | || | ||||| || | || || |||||||| | ||| ||||| ||| | | Sbjct 41367 GATGAGAGAT-TGATTGGTGAATCAGCCAAGAATCAAGCTACTATC-AATCCAGTTCAGA 41424 Query 474510 CTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTT---GATGATACCACTGTCCAAT 474566 || | || |||| || ||| | ||||||||| ||| |||||| || |||||| Sbjct 41425 CTTTGTTCGATGTAAAGAGACTTATTGGTCGTCGCTTTAAGGATGATTCC---GTCCAAA 41481 Query 474567 CTGATATGCGTCATTGG--CCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGA 474624 |||| | | ||| || | | || | || || | | | || || || ||| | Sbjct 41482 AGGATAAGACT--TTGCTACCATATGAGATTATTAACAAAGATAGCAAGCCTTACATACA 41539 Query 474625 AGCAATACACGCA--GGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTT 474682 || | | | ||||| | || ||||| | || ||| | |||| | ||||| Sbjct 41540 AGT--TTCTGTTAAGGGTGAGAAGAAGCAATTAGCCCCAGAAGAGGTTTCAGCTATGGTC 41597 Query 474683 TTAGCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGT 474741 || | ||| ||||| ||| || ||| | ||||| || | ||||||| ||||||| Sbjct 41598 TTGGTCAAGATGAAGGAAATTGCTGAGG-CTTATCTCGGTAAGGAAGTAAAGCATGCAGT 41656 Query 474742 AATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAG 474801 |||||||| ||||| || ||||||||| |||| ||||| || || || ||||| || Sbjct 41657 TATTACTGTCCCAGCTTACTTTAATGATGCTCAGCGTCAGGCTACCAAGGATGCTGGTGC 41716 Query 474802 AATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTA 474861 ||||| ||| | ||||| | |||||||||||||| ||||||||||| ||| |||||| Sbjct 41717 TATTGCCGGTTTGAATGTAATTCGTATTATTAATGAGCCAACAGCAGCAGCAATTGCTTT 41776 Query 474862 TGGTCTTGATAAGAATTCTGACAA 474885 |||| | || ||||| |||| || Sbjct 41777 TGGTTTGGACAAGAAGGCTGAGAA 41800 Score = 138 bits (152), Expect = 7e-27 Identities = 261/382 (68%), Gaps = 13/382 (3%) Strand=Plus/Plus Query 475793 AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAA 475852 || || |||||||| || || ||||| ||||| || ||||| | ||| ||| ||||| || Sbjct 42312 AACCCAGATGAAGCCGTCGCTTATGGTGCTGCCGTACAAGCTGGTATCTTAGCAGGTGAA 42371 Query 475853 TCAGACG--AGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTC 475910 | || || | | | || ||||| | |||| ||||| | | |||||| Sbjct 42372 ---GGCGGTAGTGATTTATTATTATTGGA--TGTT------ACTCCTTTAACTTTAGGTA 42420 Query 475911 TTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCA 475970 |||| || ||||| || ||||||| || || |||| ||||| ||| | | ||| || Sbjct 42421 TTGAGACTGTTGGTGGAGTTATGACAAAGCTCATTGGTAGAAACACTGTTGTTCCAACCA 42480 Query 475971 AAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCT 476030 | || |||| || ||||| |||||||| || ||||| ||||| | | Sbjct 42481 AGAAGAGCCAAGTTTTCAGTACTTACCAAGATAATCAGCCAGCTGTACTTATCCAGGTTT 42540 Query 476031 TTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAG 476090 ||| ||||| | | | ||||| ||||| || ||||||| || | ||| | Sbjct 42541 ATGAGGGTGAGCGTCCAATGACTAAGGATAACAATCTCCTTGGAAAATTCGAGCTTTCTG 42600 Query 476091 GTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAA 476150 | || || || ||||| ||||| ||||| |||||||| ||||||||||| |||||| | Sbjct 42601 GAATCCCACCAGCTCCAAGAGGTGTTCCCCAAATTGAGGTTACTTTTGAAATTGATACTG 42660 Query 476151 ATGGTATTCTTAATGTTACTGC 476172 |||||||| | | |||| ||| Sbjct 42661 ATGGTATTTTACAAGTTAGTGC 42682 >seq9 Length=112656 Score = 147 bits (162), Expect = 1e-29 Identities = 132/166 (80%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 817098 TAGATTTTTCATCTCCAAATATTGCAAAGGAAATGCATATTGGACACTTGAGATCTACAA 817157 ||||||| ||||| ||||| ||||| || ||||||||| |||||||||| |||||||||| Sbjct 73762 TAGATTTCTCATCACCAAACATTGCCAAAGAAATGCATGTTGGACACTTAAGATCTACAA 73703 Query 817158 TAATTGGTGAATCTCTTTGTAGAATATATGAATTTTGTGGATGTGAAGTACAAAGAATAA 817217 | |||||||| | |||||||| ||||| || |||| ||||||| |||| | | Sbjct 73702 TTATTGGTGATACAACATGTAGAATTCTTGAATATTTAGGATTTGAAGTATTAAGAGTTA 73643 Query 817218 ATCATATTGGTGATTGGGGAACACAATTTGGTATGTTAATTGCATA 817263 |||| |||| |||||||| || |||||||| ||| | |||| ||| Sbjct 73642 ATCACGTTGGAGATTGGGGTACTCAATTTGGCATGCTTATTGAATA 73597 >seq95 Length=16682 Score = 141 bits (156), Expect = 6e-28 Identities = 338/505 (67%), Gaps = 17/505 (3%) Strand=Plus/Minus Query 355249 CCAGTGCCAATACCTTCTGTTCCATTAACTAAAATCATTGGAATTACAGGTACATAAAAT 355308 || || ||||| || || || ||||| || |||||||||||||||| || || ||| || Sbjct 5215 CCTGTACCAATTCCATCAGTACCATTTACCAAAATCATTGGAATTATTGGAACGTAATAT 5156 Query 355309 ACTGGTTCAATCATTTTATTATCTTCAAATTGAT--GTTGCAATACATCAAAATCATGTT 355366 | |||||||| || ||| ||| || || ||| |||| | | |||| | Sbjct 5155 AAAGGTTCAATTTGTTGTCCATCATCATATAAATAAGTT--AATAAAGGATCATCAGCCT 5098 Query 355367 GTATGAAAATATATTTAGTTAATTGATTGAGTTGTGTGAAGATATATCGTGCA---CTTG 355423 | |||||||||| |||| ||| | || | || || ||||| || ||| |||| Sbjct 5097 CTGGGAAAATATATCTAGTCCATTTAGATAGCTTAGTAAATATATAACGAGCAGCACTTG 5038 Query 355424 CATTATCTTTGCCTCCACTTAATCTTGTACCAAATTGACCATTGGGAAGTAATAAATTTA 355483 ||| |||| || || | ||| |||||||||||||| || ||||| ||||| Sbjct 5037 CAT---CTTTTCCACCTTCTTTTCTACTACCAAATTGACCACATGGTTCTAATAGATTTA 4981 Query 355484 TGTTGTTACTTCCAACATAATTTTGTGCCATTTTTATTATAGTTTCAGTCATTGACTGTT 355543 || |||||||||||| ||||||| ||||| || | ||||| || ||| || Sbjct 4980 GATTATTACTTCCAACAAAATTTTGAGCCATATTAACAATAGTACTTTGCAATGATGATT 4921 Query 355544 CTCCATGATGATATTTAGTTCTTTTCGAAACTGCACCTTGTAATTCAGATACTTTAATTT 355603 ||||||||||||| | | || | ||| ||| ||||| | ||||||| Sbjct 4920 CTCCATGATGATAAGCACTATGTTCAGCAACATAACCAGCTAATTGTGCAACTTTAA--- 4864 Query 355604 CTTCTTTATAAATACCTTCTTCCTCTGAACCATACAATACTTTTCTTTGAGATGGTTTAA 355663 ||| |||| || || || || || | | |||||||||||| ||||| | Sbjct 4863 GTTCATTATTAAGCTTTTTTTTAAATGTTGCAAAAAGTACTTTTCTTTGTCCAGGTTTTA 4804 Query 355664 GACCGTCAGCTATGTTAGGTATTGATCTCATATTATC--ATCGACTGAAAATGAAATAAG 355721 ||| || || || || || ||||| || |||| ||| ||| |||| | | ||| Sbjct 4803 AACCATCTAATAAATTTGGAATAGATCTAGTAGTATCATATCTACT--AAATAATACAAG 4746 Query 355722 TTCGCGATGAATAAAATCATAATAT 355746 ||| ||||||||||||| ||||| Sbjct 4745 TTCTTTATGAATAAAATCAAAATAT 4721 >seq266 Length=101602 Score = 140 bits (154), Expect = 2e-27 Identities = 270/397 (68%), Gaps = 16/397 (4%) Strand=Plus/Minus Query 475790 GTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGT 475849 || || ||||| |||||||||||| ||||||||| | ||||| | | |||| ||| Sbjct 15229 GTTAACCCTGACGAAGCTGTTGCAATGGGAGCTGCTATACAAGCTGGTGTTTTGAAAGGG 15170 Query 475850 CAATCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGT 475909 |||| | || || || | | | ||||| || || | || |||||| Sbjct 15169 ---------GAGA---TCAAGGATCTTTTGTTACTCGACGTTACACCCTTATCTTTAGGT 15122 Query 475910 CTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGC 475969 ||||||| | || || || | ||| | ||| |||||||||| | || || Sbjct 15121 ATTGAAACTTTGGGTGGAGTTTTTACTCGATTAATTAACAGAAATACCACAATACCTACT 15062 Query 475970 AAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATC 476029 ||||| ||||||| |||||| | | || |||||||| || || || | Sbjct 15061 AAAAAGAGCCAAGTATTCTCCACTGCTGCAGACAATCAAACTCAAGTTGGAATTAAAGTT 15002 Query 476030 TTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTT--AATCTTG 476087 || |||| |||||| |||| || |||||||| |||||| ||| ||| || Sbjct 15001 TTCCAAGGAGAAAGAGAATTTGCTGCTGATAATAAGTTGCTTGGACAATTTGAAATGATG 14942 Query 476088 AAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATG 476147 || |||||||| || |||||||| || |||||||||||||| || ||||||||||||| Sbjct 14941 --GGAATTCCTCCAGCACCCAGAGGGGTACCTCAAATTGAAGTCACCTTTGATATTGATG 14884 Query 476148 CAAATGGTATTCTTAATGTTACTGCTTGTGATAAATC 476184 ||||||| ||| | |||||| ||| |||||| || Sbjct 14883 CAAATGGAATTATGAATGTTGGTGCAATTGATAAGTC 14847 Score = 125 bits (138), Expect = 5e-23 Identities = 138/184 (75%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 474681 TTTTAGCCAAAATGAAACAAACCGCGAGCTCATATCTTGGACAAGAAGTAACTGATGCAG 474740 |||| | ||||||||| |||| || | |||||||| || |||| |||| | Sbjct 15951 TTTTGGAAAAAATGAAAGAAACTGCCGAAACTTATCTTGGTAGAGGTGTAAAGCATGCTG 15892 Query 474741 TAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAA 474800 | |||||||| ||||| || |||||||||||||| |||||||||||||| ||||| || Sbjct 15891 TTATTACTGTGCCAGCTTACTTTAATGATTCTCAGCGTCAAGCAACTAAGGATGCTGGCT 15832 Query 474801 GAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTT 474860 || ||||| | ||||| | | || |||||||| ||||||||||| || ||||| | Sbjct 15831 CTATAGCAGGCTTAAATGTAACAAGAATCATTAATGAGCCAACAGCAGCGGCTCTTGCAT 15772 Query 474861 ATGG 474864 | || Sbjct 15771 ACGG 15768 >seq301 Length=25314 Score = 129 bits (142), Expect = 4e-24 Identities = 254/365 (70%), Gaps = 18/365 (5%) Strand=Plus/Plus Query 269113 CTCGTTAACAATTGTGTCGG-TCCACGCGCTCTAGAGTGAGTTTTATCGCCCACCATTTG 269171 || |||| || ||||| | | ||| | ||||||| ||| |||||||| | ||||| || Sbjct 3882 CTGGTTAGCA-TTGTGACTGCTCCTCTAGCTCTAGCATGAATTTTATCGTCAACCATATG 3940 Query 269172 TTTTAAACGCTGATAATATGTCGGACCAATAAATATTTT-GACATGCATTTTTTCTCCCG 269230 ||||| | |||||| || || || |||||||| ||| | ||| | || | | | ||||| Sbjct 3941 TTTTAGTCTCTGATAGTAAGTTGGCCCAATAAAGATTCTCGAC-TCCAATCTCTTTCCCG 3999 Query 269231 TCATACCATTTGTCATTGTTTCATTTCCCCATGCTTC--ATATCCG----TATG-AAACT 269283 | ||||| |||| ||||||||| || ||| | | ||| |||| |||| Sbjct 4000 TATGGCCATTGTACATTACTTCATTTCC--ATTTTTCTGAAACCCGGAACTATGTAAACG 4057 Query 269284 AGTTCATCATTTATTTTATTAATATCTACACCTGTAAATGGTGTCGCATCACCATATACT 269343 | || || | || | | || | | ||||| || || |||||||| | | | Sbjct 4058 GCTAGAT-ATCTCTTCAACTGTAATTTTC----GTAAAAGGAGTTGCATCACCCTCCAAT 4112 Query 269344 CCTTTAATAGCACATACTTTTCCTAATAGACATTCAATCAATTGTCCAATGGTCATACGT 269403 |||| ||| || || |||| || | ||||||||||| || || ||||| |||||||| Sbjct 4113 CCTTGAATTGCGCACGCTTTGCCAAGCAGACATTCAATTAAATGGCCAATTGTCATACGC 4172 Query 269404 TTTGGCATACAATTAGGATTAATAATAATATCTGGCACAAGTCCAGATTTAGTAAATGGC 269463 || ||| || |||||| |||||||| ||||| | || ||| || ||||||||| Sbjct 4173 GAAGGAATAGCATGAGGATTCATAATAATGTCTGGAATAATCCCATCTTGTGTAAATGGC 4232 Query 269464 ATATC 269468 ||||| Sbjct 4233 ATATC 4237 >seq285 Length=70399 Score = 123 bits (136), Expect = 2e-22 Identities = 149/199 (75%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 480572 AAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTT 480631 ||||| ||| | ||| || || ||||||| |||||||| ||| || | ||| || Sbjct 385 AAGTGGACTCTTTTTG--AATGTTGTAATCAGAGAGAGTTCTACCATCCTCTAATTGTTT 328 Query 480632 TCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTG 480691 ||| ||||| || | ||||||||||||||| || ||||||||||| |||||||||||| Sbjct 327 TCCTGCAAAGATCAAACGTTGTTGATCAGGTGGGATTCCTTCCTTATCTTGAATCTTTGC 268 Query 480692 TTTGACAGCTTCAATAGTATCAGTGTG-TGAAGTTTCAAGGGTAATAGTTTTACCGGTGA 480750 || ||| ||||| ||||| | | | || || ||| | | ||||| || || || | Sbjct 267 CTTAACATTCTCAATTGTATCTGAAGGCTCAACTTCCAAAG-TGATAGTCTTTCCTGTCA 209 Query 480751 GAGTCTTAACGAAAATTTG 480769 ||||||||||||||| || Sbjct 208 AAGTCTTAACGAAAATCTG 190 Score = 93.3 bits (102), Expect = 3e-13 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 || || |||| |||||||| ||| || | ||| ||||| ||||| || | ||||||| Sbjct 137 TTGTAGTCAGAGAGAGTTCTACCATCCTCTAATTGTTTTCCTGCAAAGATTAAACGTTGT 78 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATC 480712 |||||||| || ||||| ||||| |||||||||||| || ||| ||||| ||||| Sbjct 77 TGATCAGGTGGGATTCCCTCCTTATCTTGAATCTTTGCCTTAACATTCTCAATTGTATC 19 >seq247 Length=95557 Score = 122 bits (134), Expect = 6e-22 Identities = 133/177 (75%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 480593 ATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTG 480652 ||| || |||| ||||||||| |||||| | ||||||||||||||| || ||||| || Sbjct 42877 ATTGTAGTCAGATAGAGTTCTACCATCTTCCAATTGCTTTCCAGCAAAGATCAGACGCTG 42936 Query 480653 TTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATC 480712 ||||||||||||||| || ||||| || || |||||| || ||| ||||||||||| Sbjct 42937 TTGATCAGGAGGAATACCCTCCTTATCCTGGATCTTTGCCTTTACATTCTCAATAGTATC 42996 Query 480713 AGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || | ||| | || || || || || || | ||| || || |||||||| Sbjct 42997 GGAAGGTTCAACTTCCAATGTGATGGTCTTTCCTGTTAAAGTTTTGACAAAAATTTG 43053 >seq141 Length=124506 Score = 113 bits (124), Expect = 3e-19 Identities = 247/367 (67%), Gaps = 16/367 (4%) Strand=Plus/Minus Query 894979 AATaaaaaaaTGGATTCTGATCTTGATAAAATAAAAGATGTAGGTTTATATTTCATTGAA 895038 ||||| || |||| | ||||||||| ||||| || ||| ||| ||||||| || | Sbjct 31232 AATAATAAGATGGGTGGTGATCTTGAAAAAATTAAGATTGTTGGTGAATATTTCGTTCAC 31173 Query 895039 GTTTTTAAAGCATGTGGTATTAATATGTCTGAAACAAAGTTTATTTGGTCAAGTGATTTA 895098 | | || || || || ||||| | | || ||| ||||| || |||||| Sbjct 31172 ATATGGAAGGCTGCAGGAATGGATATGACAAATGTAAGATTTGTTTGGGCATCTGATTTT 31113 Query 895099 TTTAATA---AAAATCCTGAAAAATATTTTACAAGATTGTTAGATATTTCCGAAGAAACC 895155 ||||| || || || | | |||| |||| | || |||||||| ||||| Sbjct 31112 ATTAATGGGGAAGATTCTAATGAGTATTGGTTAAGAGTTTTTGATATTTCT--AGAAAGT 31055 Query 895156 TC--TCTTTCCAGGAGTAAAAGATGTTGTCAAATTATGGGTCGAAAAGACGGAGATGAAT 895213 | | || | || | |||||||||||| ||||||||||| || |||| |||||| Sbjct 31054 TTAATATTACTAGAATTAAAAGATGTTGCCAAATTATGGGAAGACAAGAAAATGATGAAC 30995 Query 895214 TATCTGTTTCTCAAATTATTTATCCTTGCATGCAAGTTGCAGATATTTTTGAACTCGAAC 895273 | | | || | | ||||||| ||||||||| ||| ||||| || ||||| Sbjct 30994 AACCGTGTGCTTCAGTATTTTATCCATGCATGCAATGTGCTGATATATTCCAACTC---- 30939 Query 895274 CTGAAGGAATAGATATTTGTCAATTAGGTGTTGATCAACGTAAAGTTAATATGCTCGCTC 895333 |||| ||||||||| || |||||| | |||||| | |||||||| ||||| ||| Sbjct 30938 ---AAGG--CAGATATTTGCCAGTTAGGTATGGATCAAAGAAAAGTTAACATGCTTGCTA 30884 Query 895334 TCGAATA 895340 ||||| Sbjct 30883 GAGAATA 30877 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268165945490732