Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20parvum_20[genbank_20GCA_5F002093605.1_202017-04- 14] 309 sequences; 9,082,089 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq285 125 6e-24 >seq285 Length=70399 Score = 125 bits (138), Expect = 6e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || |||| || | || || || ||||| || | ||||| || | | Sbjct 187 ATGCAGATTTTCGTTAAGACTTTGACAGGAAAGACTATCACTTTGGAAGTTGAGCCTTCA 246 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || ||| | || | || || |||||| ||||| || |||||||| || || |||||| Sbjct 247 GATACAATTGAGAATGTTAAGGCAAAGATTCAAGATAAGGAAGGAATCCCACCTGATCAA 306 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||||||||||||||||| || ||||| | |||||| |||| | || ||||| ||| Sbjct 307 CAACGTTTGATCTTTGCAGGAAAACAATTAGAGGATGGTAGAACTCTCTCTGATTACAAC 366 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 |||||||| || || || ||||||| || Sbjct 367 ATTCAAAAAGAGTCCACTTTACACTTAGT 395 Score = 96.9 bits (106), Expect = 3e-15 Identities = 101/133 (76%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 24787 AAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAA 24846 |||||| ||||| || || ||||| || || |||||||||||||| |||||||| || || Sbjct 42 AAAGATTCAAGATAAGGAGGGAATCCCACCTGATCAACAACGTTTAATCTTTGCAGGAAA 101 Query 24847 ACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACA 24906 ||| | |||||| |||| | || || || ||||||||||| || || || |||| Sbjct 102 ACAATTAGAGGATGGTAGAACTCTCTCTGACTACAACATTCAAAAAGAGTCTACTTTACA 161 Query 24907 CTTGGTGTTGCGA 24919 || || ||| || Sbjct 162 TTTAGTATTGAGA 174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449895862270520