Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20parvum_20[genbank_20GCA_5F002093605.1_202017-04- 14] 309 sequences; 9,082,089 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq11 545 2e-149 seq130 257 1e-62 seq266 147 2e-29 seq277 109 4e-18 seq95 105 5e-17 seq9 105 5e-17 >seq11 Length=60561 Score = 545 bits (604), Expect = 2e-149 Identities = 1077/1573 (68%), Gaps = 38/1573 (2%) Strand=Plus/Plus Query 281329 AGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTCCGCGATTATTAGTAAT 281388 ||| || ||| ||| | ||||| | || | || ||||| || || |||||||| Sbjct 13200 AGCATCATTAACCATACGTTCAATATCGTCCTTTGATAATCTACCCTTATCGTTAGTAAT 13259 Query 281389 AGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGAATACCATT 281448 ||| || || || || || |||||| | |||| |||||| | |||||||| Sbjct 13260 AGTGATCTTGCTGCTCTTACCAGTACTCTTATCAACAGCAGACACATTCAAGATACCATT 13319 Query 281449 GGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCC 281508 ||||| | |||||| |||||||||||||| || || ||||| | || ||||| || || Sbjct 13320 AGCATCAATATCAAAGGTGACTTCAATTTGTGGTACACCTCTTGGTGCTGGTGGAATACC 13379 Query 281509 TTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAA 281568 || | || || |||| || || ||||| ||||| | || |||||||| | Sbjct 13380 ATCAAGATGGAACTTTCCGAGGAGATGGTTATCCTTAGTCATGGCTCTCTCACCCTCATA 13439 Query 281569 AATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTC-TGGATTTTT 281627 || |||||| || || | || ||||| | |||||| || || ||| || || || Sbjct 13440 AACTTGGATCAAGACACCACTCTGGTTATCAGCATAAGTAGTGAAGACTTGTGTCTTCTT 13499 Query 281628 TACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGCTGTTTCTA 281687 | | ||| | ||||| || | ||||||| |||||||||| ||||||||| ||||||| Sbjct 13500 TGCTGGGA-TAGTTGTATTACGTTCAATAAGCTTGGTCATAACACCACCAGCAGTTTCTA 13558 Query 281688 AACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTT 281747 |||| || || | |||| ||||| | || | | || || | || | || Sbjct 13559 AACCGAGTGATAATGGAGCAACATCCAATAATAAGAGATCCTGTACGG---CAGAGGATT 13615 Query 281748 GACCAACA---AGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGAT 281804 | || || | ||||| ||||| | |||||||||||| ||||||||||| || |||| Sbjct 13616 GCTCACCATTTAAGATAGCAGCTTGTACAGCAGCACCATAAGCAACAGCTTCGTCTGGAT 13675 Query 281805 TAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATT--TGAAAGAAGTTGTCTTA-CCT 281861 | | | || | | | |||||| || ||| |||| |||| ||| | || | ||| Sbjct 13676 TGATTGCTTTGCATGGCTCTTTACCGTT-AAAGAATTCCTGAATCAAG--GCCTGAACCT 13732 Query 281862 TAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTT 281921 | |||||||| | || || ||||| ||||||| ||||| || | || |||| Sbjct 13733 TTGGAATACGTGTAGAACCACCAACCAATACAACATCATGTACAGATCTCTTGTCCATAC 13792 Query 281922 TTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTGAACAAA 281981 | |||| | ||||| ||||| || | | | || | || | || | || | Sbjct 13793 CAGCATCCTTGAGTACTTTCTCAACTGGAGCTAAAGTTGCACGGAAGTAATCAGCGCAGA 13852 Query 281982 GTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAACAAAGAAT 282041 ||||||||||| |||||||| | | | || ||||||||| ||||| | | |||| Sbjct 13853 GTTCTTCGAATCTAGCTCTACTGATGGCAACTGAATAATCAATACCTTCATAGAGTGAAT 13912 Query 282042 CAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTG 282101 | | ||||| |||| |||||| ||||| || | | | || ||||| || ||| | Sbjct 13913 CTAACTCAATTGTAGCTTGAGTAGAAGATGACAAAGTTCTCTTTGCACGCTCGCATTGAG 13972 Query 282102 TCCTTAGTCTTCGTAAGGCTTTTGCTGAT-TGATTCAAATCTGT---TTTATATTTTCTC 282157 | || ||||||| ||| ||| | || | || || ||||| | | ||| |||||| Sbjct 13973 TTCTGAGTCTTCTTAAAGCTCTAGCATTTGTGGTT-AAATCCATACCTCTATTCTTTCTC 14031 Query 282158 TTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTA 282217 |||||||||| ||||| || ||| || | ||||||||||||||||| ||||| | | Sbjct 14032 TTGAAATCTTGTACACAGAATTCTACGAGTCTGTTATCAAAATCTTCACCACCCAAGTGA 14091 Query 282218 GTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACA 282277 |||| || | |||||| | |||| |||| |||||||||| || || | | ||| Sbjct 14092 GTATCACCAGCGGTAGCTTTAACTTCAAAAATACCATCTTCAATAGTTAATAATGATACA 14151 Query 282278 TCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTC--TTGGTTT- 282334 ||| || |||||||| | ||| || || | |||||| | || | | || ||| Sbjct 14152 TCAAAAGTACCACCACCTAAATCGAAGATCAATACATTTCTCTC---GCCAGTTCCTTTC 14208 Query 282335 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 282394 |||||||||||||| |||| |||||| |||||||| || ||||| ||||||| ||||| Sbjct 14209 TTATCAAGACCATAAGCAATAGCAGCTGCAGTTGGCTCGTTAATGATTCTCATTACATTC 14268 Query 282395 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 282454 | |||||||||| |||||||| || || ||||| | ||||| || || ||||| || Sbjct 14269 AAACCAGCAATTGCACCTGCATCCTTTGTTGCTTGACGCTGTGAGTCATTGAAATAAGCT 14328 Query 282455 GGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAG--CGCTT--GCTGTTTG 282510 |||||||||| || || ||| | ||| | | ||| |||| | | | Sbjct 14329 GGAACAGTAACTACAGC----GTTCTTAATTTGGCGACCCAAGTATGCTTCAGAGATCTC 14384 Query 282511 TTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTGCTTGGATTCATT 282570 ||||| || ||||| ||| | ||||||| ||| | | ||| ||| |||| Sbjct 14385 CTTCATCTTTTGTAAAACCATAGCAGAAATTTCTTCAGCATGGAATTCCTTCTTTTCACC 14444 Query 282571 TTGATATGATAC-TTCAAAATATGGTTT---ATTACCAACATTAATAACTTTAAATGGCC 282626 | || ||| | | || ||| || || | | ||| ||||||||||||| Sbjct 14445 TAAGTAGTTTACACTGATGAT-TGGCTTGTCCTTTGGACCTCTAACTACTTTAAATGGCC 14503 Query 282627 AATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTG 282686 | | ||||||| ||| || || |||| ||| | ||||||||| | ||||| | Sbjct 14504 AGTGAGTCATATCACTTTGTACTGCCTGATCATCAAACTTTCTACCAATAAGACGTTTAG 14563 Query 282687 CATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCA 282746 ||||||||| ||||| ||| || ||| |||| | || |||||||| ||||| | Sbjct 14564 CATCAAAAACTGTATTTTCTGGGTTTCTAGCAACTTGGTTCTTTGCTGCATCACCAATAA 14623 Query 282747 GATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCG 282806 || | || || |||||||||| ||||||||||| ||||| || ||||||||||| || | Sbjct 14624 GACGCTCAGTTTCTGTAAATGCTACATATGATGGTGTTGTACGGTTACCTTGATCGTTTG 14683 Query 282807 CAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAAT 282866 || ||| || || || | ||| ||||||||| ||||| | || || ||||||| Sbjct 14684 GAACAATATCTACAGTATCGTTTCTCCATACACCAACACATGAGTATGTGGTACCTAAAT 14743 Query 282867 CAATACCAATAGC 282879 ||||||||||||| Sbjct 14744 CAATACCAATAGC 14756 Score = 96.9 bits (106), Expect = 3e-14 Identities = 203/300 (68%), Gaps = 17/300 (6%) Strand=Plus/Plus Query 85960 TCAAAATCTTCTCCTCCCAAATGTGTATTACCACCTACTGCCA-ATGTTCTAAATACTCC 86018 ||||||||||| || ||||| || |||| |||| | || | ||| ||| | || Sbjct 14068 TCAAAATCTTCACCACCCAAGTGAGTATCACCAGCGGTAGCTTTAACTTCAAAA-ATACC 14126 Query 86019 ATTTGAGATATTCATTAACGAAACATCTAATGTCCCAGCTCCTAAGTCATAAACAATTAC 86078 || | ||| | | ||| || ||||| || || ||| | ||||| || | | | ||| Sbjct 14127 ATCTTCAATAGTTAATAATGATACATCAAAAGTACCACCACCTAAATCGAAGATCAATAC 14186 Query 86079 GTTAC---CACCAGtttttttATTCCATTTTTCACTTCCTAAACCGTATGCAAGAGCTGC 86135 || | | |||||| ||| || ||| | ||| || |||| ||| || Sbjct 14187 ATTTCTCTCGCCAGTTCCTTTCTTA------TCA------AGACCATAAGCAATAGCAGC 14234 Query 86136 TGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCAATTTTAGCAGAATCAAG 86195 ||||||||| || ||||| ||| | | |||| ||||| |||||| | | | ||| Sbjct 14235 TGCAGTTGGCTCGTTAATGATTCTCATTACATTCAAACCAGCAATTGCACCTGCATCCTT 14294 Query 86196 AGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTAATAACTGCTTTATTAAT 86255 |||||||| | ||||| |||||| ||||| ||||| ||||||| || || || ||||| Sbjct 14295 TGTTGCTTGACGCTGTGAGTCATTGAAATAAGCTGGAACAGTAACTACAGCGTTCTTAAT 14354 >seq130 Length=131589 Score = 257 bits (284), Expect = 1e-62 Identities = 1025/1587 (65%), Gaps = 45/1587 (3%) Strand=Plus/Minus Query 281306 TTATCTGCTTCTTCAAATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAG 281365 || ||| |||| |||||| | ||| || ||||||| | ||| || | || | ||| Sbjct 42802 TTGTCTTCTTCGGCAAATTGCTCAGCCTCCTTAATCATACGCTCTATGTCTTCCTGTGAG 42743 Query 281366 AATCTTCCGCGATTATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCG 281425 | ||| || || ||| || |||||||| |||| |||||| || ||||| Sbjct 42742 AGTCTACCCTTATCATTTGTGATAGTAATCTTCTCGGATTTACCAGTACCCTTATCCTTT 42683 Query 281426 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 281485 ||| | || | | |||||||| | ||| | ||||| || || |||||||| || || Sbjct 42682 GCACTAACTTGTAAAATACCATCAGTATCAATTTCAAAAGTAACCTCAATTTGGGGAACA 42623 Query 281486 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTA 281545 ||||| |||| |||||||| || | | ||| |||| || ||| ||||| ||| Sbjct 42622 CCTCTTGGAGCTGGTGGGATTCCAGAAAGCTCGAATTTTCCAAGGAGATTGTTATCCTTA 42563 Query 281546 GTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTT---TGATTATCTGAA 281602 || | | || |||||||| ||| |||||| | ||||| | ||||||||| Sbjct 42562 GTCATTGGACGCTCACCCTCATAAACCTGGATA---AGTACAGCTGGCTGATTATCTTGG 42506 Query 281603 TAAGTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAATAATATT 281661 ||||| | || ||| ||| | || || |||| ||||||||| |||| | || Sbjct 42505 TAAGTACTGAAAACT-TGGCTCTTCTTGGTTGGAACAACAGTGTTTCTACCAATGAGCTT 42447 Query 281662 GGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGAC 281721 ||||||| |||||| | || || | ||| | || | |||||| ||||| | || Sbjct 42446 TGTCATAACTCCACCAACAGTCTCAATACCTAAAGTTAAAGGAGTAACATCCAATA---- 42391 Query 281722 AATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACC 281781 ||| | || | | | | || ||| | | ||| | ||||| | |||||||| Sbjct 42390 -ATAAT---AAATCACT-ACCGCCTTCACCTGCTAAGATACCAGCTTGTACGGCAGCACC 42336 Query 281782 ATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT- 281840 ||| || || |||||||| || |||| | ||| | | || |||| || || | Sbjct 42335 ATAAGCGACGGCTTCATCTGGGTTAATTCCTCTGTTTGGCTCCTTTCCATCAAAGAACTC 42276 Query 281841 -TTGAAAGAAG-TTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTC 281898 |||| | | ||| | |||||| ||||||| || || ||||| || || || || Sbjct 42275 CTTGATCAAGGCTTGAAT---CTTAGGGATACGAGTAGAACCACCAACCAAAACGATCTC 42219 Query 281899 ATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACC 281958 || || | || || | | | | |||| ||||| || | ||| || || | | Sbjct 42218 ATCTACTTCAGACTTTTTGATTCCAGCATCCTCCAAAACCTTCTTAACTGGCTCGATAGT 42159 Query 281959 AGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATA 282018 ||| |||||||| | | | || |||||||||||||| || | || | | | Sbjct 42158 CTTTCTGAACAAGTCAGCATTCAACTCATCGAATTTAGCTCTGGTCAAGGTTTCGCTCAA 42099 Query 282019 ATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGC 282078 ||| | | || | |||| |||| || | | || ||| | | ||||| || || Sbjct 42098 ATCTACATCCTCCATCAAACCTTCAATCTCGACCTTAACTTGTGGAGCTGAAGAAAGAGC 42039 Query 282079 ACGTTTAGCACGT-TC-ACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGA-TT 282135 | || | || | || || | || |||| || |||| |||| | | || || || Sbjct 42038 TCTCTTTG-ACTTCTCGACCT-CTCTCCTAAG-CTTCTGAAGGGCTCTCTTGTCAGACTT 41982 Query 282136 CAAATCTGTTTTATAT-TTTCTCTTGAA-ATCTTCAACACACCATGTTACAAGACGATT- 282192 | ||| ||| | | ||| ||||| ||||| | | || | || || | Sbjct 41981 TACATCC-TTTCCTGTCTTTGACTTGATGATCTTGATAAAG---TGGTCCATAACTCTCT 41926 Query 282193 -ATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTC 282251 ||| ||||| ||||||||||| | |||| || ||||| || | ||||| | Sbjct 41925 GATCGAAATCCTCACCTCCCAAATGGGTATCACCACTTGTAGCAACGACCTCGAAAACAC 41866 Query 282252 CATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTA 282311 | | |||| | ||| |||| ||||||| || |||||||||| ||| | | | | Sbjct 41865 CGTTATCAATGGTCAAGAGAGAAACATCAAAAGTACCACCACCCAAATCGTATACTA--A 41808 Query 282312 CATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTT 282371 || | |||| | ||| || || | |||| | |||| || || || ||||| | Sbjct 41807 AATGCTCTTCTCAGCCTTC----TTGTCCAAACCAAAAGCAATTGCTGCTGCTGTTGGCT 41752 Query 282372 CATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTC 282431 |||||||||| | | ||||| | ||| ||||| || ||||| || || || || | Sbjct 41751 CATTAATAATACGAATTACATTCAAACCGGCAATAGCACCAGCATCCTTGGTAGCCTGAC 41692 Query 282432 TTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAA 282491 || | ||| ||||| || || || ||||||||||| |||| ||||||| || || | Sbjct 41691 GCTGAGCATCATTAAAGTAAGCTGGGACAGTAATAACTGCATGCTTTACTTCCTTACCGA 41632 Query 282492 TATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAG 282551 |||||| || ||| ||||| || || | ||| | ||||| | |||||| | Sbjct 41631 GATAAGCCTCAGCAATTTCCTTCATCTTGACCAAGACCATAGCTGAAACCTCTTCTGGGG 41572 Query 282552 AATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAA 282611 ||||||| ||| | | || |||| | || || || || | |||| Sbjct 41571 CTAATTGCTTCTTCTCACCCTTAACAGAAACTTGTATGTAAGGCTTGCTATCTTTGTTAA 41512 Query 282612 TAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTAC 282671 ||| | | |||| | || |||| ||| || | || ||||| | || Sbjct 41511 TAATCTCATATGGTAGCAAAGTCTTATCCTTTTGGACGGAATCATCCTTAAAGCGACGAC 41452 Query 282672 CAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGG 282731 |||| | || ||| |||| || | ||| | |||||| | | |||||||| |||| Sbjct 41451 CAATAAGTCTCTTTACATCGAACAAAGTCTGAACTGGATTGATAGTAGCTTGATTCTTGG 41392 Query 282732 CTGCATCTCCAATCAGATGTTCTGTC-TCTGTAAATGAAACATATGATGGAGTTGTGCGA 282790 ||| || ||||||| || | || || || ||||| ||||||||||| || | ||| Sbjct 41391 CTGATTCACCAATCA-ATCTCTCATCATCAGTGAATGATACATATGATGGTGTAATACGA 41333 Query 282791 TTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTA 282850 |||||||| ||||| | |||||| || ||| ||||||| | | | ||| ||||| | Sbjct 41332 TTACCTTGTTCATTTGGAATAATCTCTACTCTACCATTCTTGTAGATACCAACACATGAA 41273 Query 282851 AAAGTTGTTCCTAAATCAATACCAATA 282877 |||| || |||||||| ||||||||| Sbjct 41272 TAAGTAGTACCTAAATCGATACCAATA 41246 >seq266 Length=101602 Score = 147 bits (162), Expect = 2e-29 Identities = 336/493 (68%), Gaps = 27/493 (5%) Strand=Plus/Plus Query 281322 ATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTCCGCGATTAT 281381 |||||| ||||||||| |||||| ||||||||| | | || | | ||| || || Sbjct 14758 ATTCTTCAGCTTCTCTGATCATTTTCTCAATTTCAGCACCACTTAGACCTCCA-GAAGAT 14816 Query 281382 TAGTAATAGTAATATTCTTGGATTTGTTT---GTTGATTTATCAGCGGCAGTCACATTAA 281438 | |||||| || | | || ||| ||| ||||| |||||| ||| ||||| | Sbjct 14817 TG--AATAGTGATCT-CGTG--TTTCTTTCCAGTTGACTTATCAATTGCACCAACATTCA 14871 Query 281439 GAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAG 281498 ||| ||||| ||||| | |||||| ||||||||||||||||| |||||||| | || | Sbjct 14872 TAATTCCATTTGCATCAATATCAAAGGTGACTTCAATTTGAGGTACCCCTCTGGGTGCTG 14931 Query 281499 GTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTT 281558 | || || || || | |||| ||| || |||||||| || |||| || || Sbjct 14932 GAGGAATTCCCATCATTTCAAATTGTCCAAGCAACTTATTATCAGCAGCAAATTCTCTTT 14991 Query 281559 CACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTC 281618 | || | ||||| || || |||| ||||||||| |||| | ||| | |||||| Sbjct 14992 CTCCTTGGAAAACTTTAATTCCAACTTGAGTTTGATTGTCTGCAGCAGTGGAGAATACT- 15050 Query 281619 TGGAT-TTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTG-GTCATAATACCACC 281676 ||| | |||||| ||| ||||| || ||||| | ||| | || | || | || ||||| Sbjct 15051 TGGCTCTTTTTAGTAGGTATTGTGGTATTTCTGTTAATTA-ATCGAGTAAAAACTCCACC 15109 Query 281677 AGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT-TTTGAAGTT 281735 ||||| | ||| | ||| | || || || || | || | || || |||| Sbjct 15110 CAAAGTTTCAATACCTAAAGATAAGGGTGTAACGTCGAGTAACAAAAGATCCTTGA---- 15165 Query 281736 TTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTT 281795 || | ||| ||| || | | ||||| |||||||| || ||||||||||| Sbjct 15166 --TCTCCCCTTT---CAA----AACACCAGCTTGTATAGCAGCTCCCATTGCAACAGCTT 15216 Query 281796 CATCAGGATTAAC 281808 | ||||| ||||| Sbjct 15217 CGTCAGGGTTAAC 15229 Score = 100 bits (110), Expect = 2e-15 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 282344 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 282403 || || |||| ||| || || ||||| |||||||| ||||| ||||| | || || Sbjct 15768 CCGTATGCAAGAGCCGCTGCTGTTGGCTCATTAATGATTCTTGTTACATTTAAGCCTGCT 15827 Query 282404 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 282463 || || ||||| ||||| ||||| | || ||||| ||||| || || || |||||| Sbjct 15828 ATAGAGCCAGCATCCTTAGTTGCTTGACGCTGAGAATCATTAAAGTAAGCTGGCACAGTA 15887 Query 282464 ATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTT 282523 ||||| |||| |||| || | |||| ||||| || |||| ||||||||| Sbjct 15888 ATAACAGCATGCTTTACACCTCTACCAAGATAAGTTTCGGCAGTTTCTTTCATTTTTTCC 15947 Query 282524 AAAATCATTGATGAAATTTGTTCTGGAGAATAT 282556 ||||| | || | |||||| |||| |||| Sbjct 15948 AAAATAAATGCTCCAATTTGACTTGGACTATAT 15980 Score = 91.5 bits (100), Expect = 1e-12 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 86119 CCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCA 86178 |||||||||||||| ||||| ||||| |||||||| ||| | |||| ||| || || Sbjct 15768 CCGTATGCAAGAGCCGCTGCTGTTGGCTCATTAATGATTCTTGTTACATTTAAGCCTGCT 15827 Query 86179 ATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTA 86238 || ||| ||| ||||||||| | ||| | |||||||| || ||||| |||||| Sbjct 15828 ATAGAGCCAGCATCCTTAGTTGCTTGACGCTGAGAATCATTAAAGTAAGCTGGCACAGTA 15887 Query 86239 ATAACTGC 86246 ||||| || Sbjct 15888 ATAACAGC 15895 >seq277 Length=127130 Score = 109 bits (120), Expect = 4e-18 Identities = 295/441 (67%), Gaps = 14/441 (3%) Strand=Plus/Plus Query 161051 TCGAATGGATTATCAACATTGAAT-TTTTTGCGATAACCAAGATCTACAAGTAATCTGTC 161109 || || |||||| ||| ||| | |||||| ||| ||||| | | ||||||||| || Sbjct 120185 TCAAAAGGATTAGAAACGTTGTAGATTTTTGGAATATCCAAGG-CAAAAAGTAATCTATC 120243 Query 161110 AGCAACATATTTAATATATTGAGACATTAGTTCAGAATTCATACCAAGAAGTTTACACGG 161169 ||||||| ||| ||||||||| | ||| ||| ||||||||||||| ||| | | || Sbjct 120244 AGCAACAAATTCAATATATTGGGCCATAAGTCTCGAATTCATACCAATAAGATCAACAGG 120303 Query 161170 AAGAGAATCATTAATAAATTCTTCTTCAATTTCAATCGCTTCGTCAATAATTTGGTAAAC 161229 |||||| ||| || ||| | | ||||| ||||| ||||| || ||||| | || Sbjct 120304 AAGAGAGTCACAAAGAAAGTTTCTTTCAACTTCAACAGCTTCTGATATGATTTGTTGTAC 120363 Query 161230 AACAGATTCTTTCAAACGATTATTCAACAATGAATACATAATACAAGCAAGTTCTACATG 161289 || || || | || | | ||| || | |||||||| || |||| Sbjct 120364 TCTAGGAGCTGGTAATTTAAATTTAAGGGCTTTATATATTAAACAAGCAAAATCAGCATG 120423 Query 161290 TTTGTTTTCATCACGAGCAATAAATTGATTTGATATAATTAGACCAGGCATTACATGCAT 161349 |||||||||| ||||| || ||| || | | || ||||||| || | || Sbjct 120424 GAGACCTTCATCACGACTAATAAGTTCATTAGAAAATGTGAGTCCAGGCA-TAAGTCCAC 120482 Query 161350 TTCTCTAGTTTTTAA-CCAGAAAATCGAAGCAAATGAT-CCACTAAAGAAAACGCCTTCT 161407 | ||||||| ||| ||||| | | |||| | | ||| ||| | || ||||| Sbjct 120483 GT------TTTTTAAGCCAAAAAATTGCA-CAAAAGCTACCAGAAAATAGAATTCCTTCA 120535 Query 161408 ACAATAGAGAATGCTACTAATT-TGTGAGCATATGTCTTATCAGATTTAATCCATTTATT 161466 ||| | ||||| | | ||||| | | |||| | | ||||| || ||||||||| | Sbjct 120536 ACAGCACAGAAT-CCAATAATTCTTTCAGCAAAAGATCGCTCAGAATTCATCCATTTAGT 120594 Query 161467 ACACCAATCAGCTTTCTTTTT 161487 ||| || ||||||||||| Sbjct 120595 TGCCCATTCTGCTTTCTTTTT 120615 >seq95 Length=16682 Score = 105 bits (116), Expect = 5e-17 Identities = 331/503 (66%), Gaps = 15/503 (3%) Strand=Plus/Plus Query 401131 TATTATGATTTCATTCACAAAGAACTTATTACTTTTTCTGTGGATGACGTTCT--TAGAT 401188 |||| |||||| ||||| ||||||||| | || || || ||| | || ||||| Sbjct 4722 TATTTTGATTTTATTCATAAAGAACTTGTA--TTATTTAGTAGATATGATACTACTAGAT 4779 Query 401189 CTGTTCCTAATTTAATGGATGGATTTAAACCATCACATCGCAAAGTATTTTATGGTTCTG 401248 || |||| |||||| | ||||| || ||||| ||| | |||||| ||| || | Sbjct 4780 CTATTCCAAATTTATTAGATGGTTTAAAACCTGGACAAAGAAAAGTACTTTTTGCAACAT 4839 Query 401249 TTGAAAAGAATATTTATAAGCAAGAGATTAAAGTATCAGATTTGACTGGTTTTGTCTC-G 401307 || |||| || || |||| || ||||||| || | || |||||| ||| | | Sbjct 4840 TTAAAAAAAAGCTTAATAATGAAC---TTAAAGTTGCACAATTAGCTGGTTATGTTGCTG 4896 Query 401308 AATATGACGAAATATCATCATGGTGATCAATCATTATCATCAACTATTGTCGGAATGGCT 401367 || || | ||||||||||| || |||||| | |||||||| |||||| Sbjct 4897 AACATAGTGCT-TATCATCATGGAGAATCATCATTGCAAAGTACTATTGTTAATATGGCT 4955 Query 401368 CAAAATTATGTGGGAAGTAACAATCTCAATTTGTTAATGCCATTGGGAATGTTTGGATCT 401427 ||||||| ||| |||||||| ||||| ||| | ||| |||| || ||||| | Sbjct 4956 CAAAATTTTGTTGGAAGTAATAATCTAAATCTATTAGAACCATGTGGTCAATTTGGTAGT 5015 Query 401428 AGATTGACCGGAGGTAAAGATTCAGCGAGTCCTAGGTATTTGAACACTAAATTAGATGAT 401487 ||| || || |||||| || | || | ||| | ||||| || | | Sbjct 5016 AGAAAAGAAGGTGGAAAAGATGCAAGTGCTGCTCGTTATATATTTACTAAGCTATCTAAA 5075 Query 401488 TTGGCAAAGAAAATCTTCATTGATTATGATTTTGATATTCTTCAACATCAGTCAGAAGAT 401547 | | | | | || ||| || |||| | | || || ||| | | | | | ||| Sbjct 5076 TGGACTAGATATATTTTCCCAGAGGCTGATGATCCT-TTATT-AAC-TTATTTATATGAT 5132 Query 401548 AATTG---TCGAATTGAACCTGTTTATTATGCTCCTATTATTCCAATGATACTTGTAAAT 401604 || | | |||||||||| | ||||| | ||| || ||||||||||| | |||||| Sbjct 5133 GATGGACAACAAATTGAACCTTTATATTACGTTCCAATAATTCCAATGATTTTGGTAAAT 5192 Query 401605 GGAGCTGAAGGAATTGGTACTGG 401627 || |||| ||||||||||| || Sbjct 5193 GGTACTGATGGAATTGGTACAGG 5215 Score = 98.7 bits (108), Expect = 7e-15 Identities = 223/340 (66%), Gaps = 33/340 (10%) Strand=Plus/Plus Query 399172 ATTACTTATGTACCTGGTCTATATAAAATTTATGATGAAGTAATTGTAAATGCGGCAGAT 399231 |||| ||||||||||||| ||||||| |||| ||||||| | | || ||||| || ||| Sbjct 2523 ATTAATTATGTACCTGGTTTATATAAGATTTTTGATGAAATCTTAGTTAATGCTGCTGAT 2582 Query 399232 CATAA--CAAGAGA-------------------------TGTCAAACATGTAATATTATC 399264 ||| | ||||| | | ||| ||||| | ||| Sbjct 2583 GTTAAAGCTAGAGAAATTTCAACTAAAAATAATCATATTTTTGAAAAATGTACTTGTATT 2642 Query 399265 AAAGTTGATATCGATC---AAAAAACAGGTCAAATTTCTGTTTGGAATAATGGTGATGGT 399321 |||||||| || || |||||| || ||||| |||| | ||| |||| || || Sbjct 2643 AAAGTTGAAATTAATAGAGAAAAAAAAG---AAATTACTGTATTTAATGATGGAGAAGGA 2699 Query 399322 ATTGATGTAGCAATTCATAAAGAACATAATATATGGGTACCATCAATGATTTTTGGAGAA 399381 || | | ||| |||| ||||||| | ||| || ||| | | ||||||||| | Sbjct 2700 ATACCAATTGAAATACATAGAGAACATCAAGTATATGTTCCAGAATTAATTTTTGGACAT 2759 Query 399382 CTTTTAACGTCTACTAATTACGATAAAAACGAGGAAAAAACTGTTGGTGGTAAAAATGGT 399441 | ||||| ||| |||||| ||| | || || || | | | ||| || | ||||||| Sbjct 2760 TTATTAACTTCTGATAATTATGATGATAATGAAGATAGAGTTACTGGAGGAAGAAATGGT 2819 Query 399442 TTTGGCGCTAAGCTTGCTAATATTTATTCTGTTGAATTTA 399481 ||||| || || ||| ||||||| | ||| ||||||| Sbjct 2820 TTTGGAGCAAAACTTACTAATATATTCTCTAAAGAATTTA 2859 >seq9 Length=112656 Score = 105 bits (116), Expect = 5e-17 Identities = 134/183 (73%), Gaps = 1/183 (1%) Strand=Plus/Minus Query 637117 AAAATTATTGTCGATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATTGGACATTTA 637176 ||| | ||||| |||| || || ||||| ||||| |||||||||||| ||||||| ||| Sbjct 73772 AAAGTAATTGTAGATTTCTCATCACCAAACATTGCCAAAGAAATGCATGTTGGACACTTA 73713 Query 637177 AGATCAACTATTATTGGTGAATCTATTTGTAGGGTATTAGAAATGTGTGGACACGATGTT 637236 ||||| || ||||||||||| | | ||||| | | ||| | ||| || || Sbjct 73712 AGATCTACAATTATTGGTGATACAACATGTAGAATTCTTGAATATTTAGGATTTGAAGTA 73653 Query 637237 TATCGTATTAATCATGTGGGTGATTGGGGAACTCAATTCGGTATGTTAATTGCTTATATT 637296 | | ||||||| || || |||||||| |||||||| || ||| | |||| ||| || Sbjct 73652 TTAAGAGTTAATCACGTTGGAGATTGGGGTACTCAATTTGGCATGCTTATTGAATAT-TT 73594 Query 637297 AAA 637299 ||| Sbjct 73593 AAA 73591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740615229405834