Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20parvum_20[genbank_20GCA_5F002093605.1_202017-04- 14] 309 sequences; 9,082,089 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq285 93.3 4e-14 >seq285 Length=70399 Score = 93.3 bits (102), Expect = 4e-14 Identities = 160/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | || || || || || || ||||| | ||||| | ||||| || ||| | Sbjct 187 ATGCAGATTTTCGTTAAGACTTTGACAGGAAAGACTATCACTTTGGAAGTTGA-GCCTTC 245 Query 25235 -GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293 ||||| || ||| | || || ||| ||| ||||| || || || || || ||||| Sbjct 246 AGATACAATTGAGAATGTTAAGGCAAAGATTCAAGATAAGGAAGGAATCCCACCTGATCA 305 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAA 25353 ||| | | || | | || |||||| | || |||| ||||| | || |||||||| Sbjct 306 ACAACGTTTGATCTTTGCAGGAAAACAATTAGAGGATGGTAGAACTCTCTCTGATTACAA 365 Query 25354 TATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAA 25403 ||||||||||| ||||| | || ||||| | ||| | ||||| |||| Sbjct 366 CATTCAAAAAGAGTCCACTTTACACTTAGTCCTGAGACTTAGAGGCGGAA 415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445092680822880