Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20parvum_20[genbank_20GCA_5F002093605.1_202017-04- 14] 309 sequences; 9,082,089 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq262 95.1 1e-14 >seq262 Length=70338 Score = 95.1 bits (104), Expect = 1e-14 Identities = 171/250 (68%), Gaps = 0/250 (0%) Strand=Plus/Plus Query 53490 ATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTG 53549 ||||| | | || ||||| ||||| | || |||| || |||| | | || |||| Sbjct 38628 ATGGATTAATTCCGATGCTGCGCGTTTATAATGACACTGCTAGGTATATTGATCAAGGTG 38687 Query 53550 GTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGG 53609 | |||||||| || || | | || || || | ||||||||||||| || || | | Sbjct 38688 GAGGGAAGCGTAAAGGTGCCATTGCAATTTATTTGGAGCCGTGGCACGTTGATGTTGTAG 38747 Query 53610 AGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTTTA 53669 ||||| | || | | |||||| || | ||||||||| | || || || | ||| Sbjct 38748 AGTTTATTGAAATCAGGAAGAATCACGGAAAGGAAGAGATGAGATGTCGCGATATCTTTC 38807 Query 53670 CAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACC 53729 | || || ||| |||| || || |||||| ||| || |||||||| | || ||| | Sbjct 38808 CTGCCCTTTGGGTTCCTGATCTGTTCATGGAAAGAGTTGAGAAGGATCAAGATTGGACTC 38867 Query 53730 TGATGTGCCC 53739 | |||||||| Sbjct 38868 TAATGTGCCC 38877 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547213886378200