Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20parvum_20[genbank_20GCA_5F002093605.1_202017-04- 14] 309 sequences; 9,082,089 total letters Query= NC_028955.1 Length=197361 Score E Sequences producing significant alignments: (Bits) Value seq171 86.0 8e-12 >seq171 Length=157509 Score = 86.0 bits (94), Expect = 8e-12 Identities = 190/285 (67%), Gaps = 0/285 (0%) Strand=Plus/Plus Query 136348 AATTAAAGGAGACTGCAAGTAAACTGGCAACATCAGGAAAGGGAATACTTGCTGTTGATG 136407 ||||| || | |||||| || | |||| |||||||||| ||| | || | |||| Sbjct 96441 AATTAGCAGAAAATGCAAGGAAGATCGCAAGCCCAGGAAAGGGTATATTGGCAGCAGATG 96500 Query 136408 AATCTACAAATACTTGTGGGAAAAGATTGGCTAGTATTGGAGTAGAAAATACAGAGGCAA 136467 |||| || ||| | ||||||||| | | ||||| | || ||||| || |||| Sbjct 96501 AATCCACTGGTACAATTAAGAAAAGATTTGATCAAGTTGGAATTGAGAATACTGAAGCAA 96560 Query 136468 ATAGACAGGCATACAGAGGTATGTTATTTACCACAGAGGGATTAGGTAATTATATTAGTG 136527 | ||| || || |||| || | |||| || || || || | | || ||| || Sbjct 96561 ACAGAGCAGCTTATAGAGAATTGCTTTTTAAAACTGAAGGTTTGAATCAATACATTTCTG 96620 Query 136528 GTGCTATCTTATTTGAAGAAACACTATTTCAAGATCATGCTGATGGAGAAAGCATGATTG 136587 | | |||| ||| |||||||| || || ||| | || ||| || | |||| | Sbjct 96621 GAGTTATCCTATACGAAGAAACTCTTTTCCAAAGTACAGCAAGTGGTGAGAAGATGACCG 96680 Query 136588 CAAAGTTAGAGAAGCAAGGAATTATACCAGGTATCAAGGTAGATA 136632 ||| | ||||||||||| ||||||| |||||||| |||| Sbjct 96681 ACTTATTAAAAAAGCAAGGAATCTTACCAGGAATCAAGGTTGATA 96725 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 631424761112440