Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20parvum_20[genbank_20GCA_5F002093615.1_202017-04- 14] 3,256 sequences; 9,040,186 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq2837 98.7 2e-15 >seq2837 Length=6166 Score = 98.7 bits (108), Expect = 2e-15 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 124548 TTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAATGATACAATT 124607 ||| | || || ||||||| || || || || | || ||||| | ||||| ||| Sbjct 6166 TTTGTCAAAACTTTAACAGGAAAGACCATCACATTGGAAGTTGAACCTTCCGATACTATT 6107 Query 124608 TCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTT 124667 ||| |||| || || || ||||| || ||||| || ||||||||||| | || Sbjct 6106 GAGAATGTAAAGGCAAAGATCCAGGATAAGGAGGGTATTCCTCCTGATCAACAGCGTCTG 6047 Query 124668 ATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAA 124727 || ||||| ||||| ||||| || ||| || |||| || || || ||||| || || Sbjct 6046 ATCTTTGCTGGAAAGCAATTGGAAGATGGTAGAACTCTATCTGACTACAATATCCAGAAG 5987 Query 124728 GAATCAACTTTGCATTTGGTTTTA 124751 || || ||||||||||| || ||| Sbjct 5986 GAGTCCACTTTGCATTTAGTATTA 5963 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755425252940800