Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20parvum_20[genbank_20GCA_5F002093615.1_202017-04- 14] 3,256 sequences; 9,040,186 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq2837 84.2 2e-11 >seq2837 Length=6166 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 21843 TTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCAGAAACGGTG 21902 ||| | ||||| ||||| || || ||||| || ||||| ||| | | || || | Sbjct 6166 TTTGTCAAAACTTTAACAGGAAAGACCATCACATTGGAAGTTGAACCTTCCGATACTATT 6107 Query 21903 GCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAACAGAGACTT 21962 | || | ||| ||| || ||||| |||||| | ||| | |||||| | || Sbjct 6106 GAGAATGTAAAGGCAAAGATCCAGGATAAGGAGGGTATTCCTCCTGATCAACAGCGTCTG 6047 Query 21963 ATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAATATTCAGAAG 22022 ||||||||||| || ||| | |||||| | |||| | | || |||||||| |||||| Sbjct 6046 ATCTTTGCTGGAAAGCAATTGGAAGATGGTAGAACTCTATCTGACTACAATATCCAGAAG 5987 Query 22023 GAATCTACTCTTCATATGGTATTA 22046 || || ||| | ||| | |||||| Sbjct 5986 GAGTCCACTTTGCATTTAGTATTA 5963 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358110588712624