Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20parvum_20[genbank_20GCA_5F002093615.1_202017-04- 14] 3,256 sequences; 9,040,186 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq3099 322 4e-82 seq1523 259 4e-63 seq2671 161 8e-34 seq800 147 2e-29 seq2559 114 1e-19 seq3075 105 5e-17 seq1457 105 5e-17 seq853 104 2e-16 seq870 98.7 8e-15 seq2925 86.0 5e-11 >seq3099 Length=2119 Score = 322 bits (356), Expect = 4e-82 Identities = 670/986 (68%), Gaps = 19/986 (2%) Strand=Plus/Plus Query 517162 AGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTCCGCGATTATTAGTAAT 517221 ||| || ||| ||| | ||||| | || | || ||||| || || |||||||| Sbjct 1141 AGCATCATTAACCATACGTTCAATATCGTCCTTTGATAATCTACCCTTATCGTTAGTAAT 1200 Query 517222 AGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGAATACCATT 517281 ||| || || || || || |||||| | |||| |||||| | |||||||| Sbjct 1201 AGTGATCTTGCTGCTCTTACCAGTACTCTTATCAACAGCAGACACATTCAAGATACCATT 1260 Query 517282 GGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCC 517341 ||||| | |||||| |||||||||||||| || || ||||| | || ||||| || || Sbjct 1261 AGCATCAATATCAAAGGTGACTTCAATTTGTGGTACACCTCTTGGTGCTGGTGGAATACC 1320 Query 517342 TTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAA 517401 || | || || |||| || || ||||| ||||| | || |||||||| | Sbjct 1321 ATCAAGATGGAACTTTCCGAGGAGATGGTTATCCTTAGTCATGGCTCTCTCACCCTCATA 1380 Query 517402 AATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTC-TGGATTTTT 517460 || |||||| || || | || ||||| | |||||| || || ||| || || || Sbjct 1381 AACTTGGATCAAGACACCACTCTGGTTATCAGCATAAGTAGTGAAGACTTGTGTCTTCTT 1440 Query 517461 TACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGCTGTTTCTA 517520 | | ||| | ||||| || | ||||||| |||||||||| |||||| || ||||||| Sbjct 1441 TGCTGGGA-TAGTTGTATTACGTTCAATAAGCTTGGTCATAACACCACCAGCAGTTTCTA 1499 Query 517521 AACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTT 517580 |||| || || | |||| ||||| | || | | || || | || | || Sbjct 1500 AACCGAGTGATAATGGAGCAACATCCAATAATAAGAGATCCTGTACGG---CAGAGGATT 1556 Query 517581 GACCAACA---AGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGAT 517637 | || || | ||||| ||||| | |||||||||||| ||||||||||| || |||| Sbjct 1557 GCTCACCATTTAAGATAGCAGCTTGTACAGCAGCACCATAAGCAACAGCTTCGTCTGGAT 1616 Query 517638 TAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATT--TGAAAGAAGTTGTCTTA-CCT 517694 | | | || | | | |||||| || ||| |||| |||| ||| | || | ||| Sbjct 1617 TGATTGCTTTGCATGGCTCTTTACCGTT-AAAGAATTCCTGAATCAAG--GCCTGAACCT 1673 Query 517695 TAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTT 517754 | |||||||| | || || ||||| ||||||| ||||| || | || |||| Sbjct 1674 TTGGAATACGTGTAGAACCACCAACCAATACAACATCATGTACAGATCTCTTGTCCATAC 1733 Query 517755 TTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCTGAACAAA 517814 | |||| | ||||| ||||| || | | | || | || | || | || | Sbjct 1734 CAGCATCCTTGAGTACTTTCTCAACTGGAGCTAAAGTTGCACGGAAGTAATCAGCGCAGA 1793 Query 517815 GTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAACAAAGAAT 517874 ||||||||||| |||||||| | | | || ||||||||| ||||| | | |||| Sbjct 1794 GTTCTTCGAATCTAGCTCTACTGATGGCAACTGAATAATCAATACCTTCATAGAGTGAAT 1853 Query 517875 CAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTG 517934 | | ||||| |||| |||||| ||||| || | | | || ||||| || ||| | Sbjct 1854 CTAACTCAATTGTAGCTTGAGTAGAAGATGACAAAGTTCTCTTTGCACGCTCGCATTGAG 1913 Query 517935 TCCTTAGTCTTCGTAAGGCTTTTGCTGAT-TGATTCAAATCTGT---TTTATATTTTCTC 517990 | || ||||||| ||| ||| | || | || || ||||| | | ||| |||||| Sbjct 1914 TTCTGAGTCTTCTTAAAGCTCTAGCATTTGTGGTT-AAATCCATACCTCTATTCTTTCTC 1972 Query 517991 TTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTA 518050 |||||||||| ||||| || ||| || | ||||||||||||||||| ||||| | | Sbjct 1973 TTGAAATCTTGTACACAGAATTCTACGAGTCTGTTATCAAAATCTTCACCACCCAAGTGA 2032 Query 518051 GTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACA 518110 |||| || | |||||| | |||| |||| |||||||||| || || | | |||| Sbjct 2033 GTATCACCAGCGGTAGCTTTAACTTCAAAAATACCATCTTCAATAGTTAATAATGATACA 2092 Query 518111 TCATGGGTTCCACCACCCATATCAAA 518136 ||| || |||||||| | ||| || Sbjct 2093 TCAAAAGTACCACCACCTAAATCGAA 2118 >seq1523 Length=11895 Score = 259 bits (286), Expect = 4e-63 Identities = 442/633 (70%), Gaps = 15/633 (2%) Strand=Plus/Plus Query 518089 TTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATT 518148 ||||| || || | | ||||||| || |||||||| | ||| || || | |||||| Sbjct 1 TTCAATAGTTAATAATGATACATCAAAAGTACCACCACCTAAATCGAAGATCAATACATT 60 Query 518149 CATTTCTTTGTC--TTGGTTT-TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTC 518205 | || | | || ||| |||||||||||||| |||| |||||| |||||||| || Sbjct 61 TCTCTC---GCCAGTTCCTTTCTTATCAAGACCATAAGCAATAGCAGCTGCAGTTGGCTC 117 Query 518206 ATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCT 518265 ||||| ||||||| ||||| | |||||||||| |||||||| || || ||||| | Sbjct 118 GTTAATGATTCTCATTACATTCAAACCAGCAATTGCACCTGCATCCTTTGTTGCTTGACG 177 Query 518266 TTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAAT 518325 ||||| || || ||||| || |||||||||| || || | | | || ||| | Sbjct 178 CTGTGAGTCATTGAAATAAGCTGGAACAGTAACTACAGCGTTCTTAATTTGGCGACCCAA 237 Query 518326 ATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGG--G 518383 || || | | | ||||| || ||||| ||| | ||||||| ||| | | Sbjct 238 GTATGCTTCAGAGATCTCCTTCATCTTTTGTAAAACCATAGCAGAAATTTCTTCAGCATG 297 Query 518384 GAATATTGCTTGGATTCATTTTGATATGATACT-TCAAAATATGGTTTAT---TACCAAC 518439 |||| | ||| |||| | || ||| | | || ||| || | | | | Sbjct 298 GAAT--TCCTTCTTTTCACCTAAGTAGTTTACACTGATGAT-TGGCTTGTCCTTTGGACC 354 Query 518440 ATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATC 518499 ||| |||||||||||||||| ||||||| ||| || || |||| ||| | Sbjct 355 TCTAACTACTTTAAATGGCCAGTGAGTCATATCACTTTGTACTGCCTGATCATCAAACTT 414 Query 518500 TCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATA 518559 ||||||||| | ||||| |||||||||| ||||| ||| || | ||| |||| | Sbjct 415 TCTACCAATAAGACGTTTAGCATCAAAAACTGTATTTTCTGGGTTTCTAGCAACTTGGTT 474 Query 518560 TTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGT 518619 || |||||||| ||||| ||| | || || |||||||||| ||||||||||| ||||| Sbjct 475 CTTTGCTGCATCACCAATAAGACGCTCAGTTTCTGTAAATGCTACATATGATGGTGTTGT 534 Query 518620 GCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACA 518679 || ||||||||||| || | || ||| || || || | ||| ||||||||| ||||| Sbjct 535 ACGGTTACCTTGATCGTTTGGAACAATATCTACAGTATCGTTTCTCCATACACCAACACA 594 Query 518680 ACTAAAAGTTGTTCCTAAATCAATACCAATAGC 518712 | || || |||||||||||||||||||| Sbjct 595 TGAGTATGTGGTACCTAAATCAATACCAATAGC 627 Score = 96.9 bits (106), Expect = 3e-14 Identities = 104/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 322243 ACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGC 322302 ||| || |||| ||| ||||||||||| || ||||| ||| | | |||| ||||| || Sbjct 88 ACCATAAGCAATAGCAGCTGCAGTTGGCTCGTTAATGATTCTCATTACATTCAAACCAGC 147 Query 322303 AATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGT 322362 |||| | | | ||| |||||||| | ||||| |||||| ||||| ||||| ||||| Sbjct 148 AATTGCACCTGCATCCTTTGTTGCTTGACGCTGTGAGTCATTGAAATAAGCTGGAACAGT 207 Query 322363 AATAACTGCTTTATTAAT 322380 || || || || ||||| Sbjct 208 AACTACAGCGTTCTTAAT 225 >seq2671 Length=695 Score = 161 bits (178), Expect = 8e-34 Identities = 341/506 (67%), Gaps = 2/506 (0%) Strand=Plus/Minus Query 518206 ATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCT 518265 ||||||||| | | ||||| | ||| ||||| || ||||| || || || || | Sbjct 695 ATTAATAATACGAATTACATTCAAACCGGCAATAGCACCAGCATCCTTGGTAGCCTGACG 636 Query 518266 TTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAAT 518325 || | ||| ||||| || || || ||||||||||| |||| ||||||| ||||| | Sbjct 635 CTGAGCATCATTAAAGTAAGCTGGGACAGTAATAACTGCATGCTTTACTTCCTTACCGAG 576 Query 518326 ATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGA 518385 |||||| || ||| ||||| || || | ||| | ||||| | |||||||| Sbjct 575 ATAAGCCTCAGCAATTTCCTTCATCTTGACCAAGACCATAGCTGAAACCTCTTCTGGGGC 516 Query 518386 ATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAAT 518445 ||||||| ||| | | || |||| | || || || || | ||||| Sbjct 515 TAATTGCTTCTTCTCACCCTTAACAGAAACTTGTATGTAAGGCTTGCTATCTTTGTTAAT 456 Query 518446 AACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACC 518505 || | | |||| | || |||| ||| || | || ||||| | ||| Sbjct 455 AATCTCATATGGTAGCAAAGTCTTATCCTTTTGGACGGAATCATCCTTAAAGCGACGACC 396 Query 518506 AATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGC 518565 ||| | || ||| |||| || | ||| | |||||| || | |||||||| ||||| Sbjct 395 AATAAGTCTCTTTACATCGAACAAAGTCTGAACTGGATTGATAGTAGCTTGATTCTTGGC 336 Query 518566 TGCATCTCCAATCAGATGTTCTGTC-TCTGTAAATGAAACATATGATGGAGTTGTGCGAT 518624 || || ||||||| || | || || || ||||| ||||||||||| || | |||| Sbjct 335 TGATTCACCAATCA-ATCTCTCATCATCAGTGAATGATACATATGATGGTGTAATACGAT 277 Query 518625 TACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAA 518684 ||||||| ||||| | |||||| || ||| ||||||| | | | ||| ||||| | Sbjct 276 TACCTTGTTCATTTGGAATAATCTCTACTCTACCATTCTTGTAGATACCAACACATGAAT 217 Query 518685 AAGTTGTTCCTAAATCAATACCAATA 518710 |||| || |||||||| ||||||||| Sbjct 216 AAGTAGTACCTAAATCGATACCAATA 191 >seq800 Length=549 Score = 147 bits (162), Expect = 2e-29 Identities = 336/493 (68%), Gaps = 27/493 (5%) Strand=Plus/Plus Query 517155 ATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTCCGCGATTAT 517214 |||||| ||||||||| |||||| ||||||||| | | || | | ||| || || Sbjct 7 ATTCTTCAGCTTCTCTGATCATTTTCTCAATTTCAGCACCACTTAGACCTCCA-GAAGAT 65 Query 517215 TAGTAATAGTAATATTCTTGGATTTGTTT---GTTGATTTATCAGCGGCAGTCACATTAA 517271 | |||||| || | | || ||| ||| ||||| |||||| ||| ||||| | Sbjct 66 TG--AATAGTGATCT-CGTG--TTTCTTTCCAGTTGACTTATCAATTGCACCAACATTCA 120 Query 517272 GAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAG 517331 ||| ||||| ||||| | |||||| ||||||||||||||||| |||||||| | || | Sbjct 121 TAATTCCATTTGCATCAATATCAAAGGTGACTTCAATTTGAGGTACCCCTCTGGGTGCTG 180 Query 517332 GTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTT 517391 | || || || || | |||| ||| || |||||||| || |||| || || Sbjct 181 GAGGAATTCCCATCATTTCAAATTGTCCAAGCAACTTATTATCAGCAGCAAATTCTCTTT 240 Query 517392 CACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTC 517451 | || | ||||| || || |||| ||||||||| |||| | ||| | |||||| Sbjct 241 CTCCTTGGAAAACTTTAATTCCAACTTGAGTTTGATTGTCTGCAGCAGTGGAGAATACT- 299 Query 517452 TGGAT-TTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTG-GTCATAATACCACC 517509 ||| | |||||| ||| ||||| || ||||| | ||| | || | || | || ||||| Sbjct 300 TGGCTCTTTTTAGTAGGTATTGTGGTATTTCTGTTAATTA-ATCGAGTAAAAACTCCACC 358 Query 517510 TGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT-TTTGAAGTT 517568 ||||| | ||| | ||| | || || || || | || | || || |||| Sbjct 359 CAAAGTTTCAATACCTAAAGATAAGGGTGTAACGTCGAGTAACAAAAGATCCTTGA---- 414 Query 517569 TTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTT 517628 || | ||| ||| || | | ||||| |||||||| || ||||||||||| Sbjct 415 --TCTCCCCTTT---CAA----AACACCAGCTTGTATAGCAGCTCCCATTGCAACAGCTT 465 Query 517629 CATCAGGATTAAC 517641 | ||||| ||||| Sbjct 466 CGTCAGGGTTAAC 478 >seq2559 Length=3356 Score = 114 bits (126), Expect = 1e-19 Identities = 296/441 (67%), Gaps = 14/441 (3%) Strand=Plus/Plus Query 396953 TCGAATGGATTATCAACATTGAAT-TTTTTGCGATAACCAAGATCTACAAGTAATCTGTC 397011 || || |||||| ||| ||| | |||||| ||| ||||| | | ||||||||| || Sbjct 1687 TCAAAAGGATTAGAAACGTTGTAGATTTTTGGAATATCCAAGG-CAAAAAGTAATCTATC 1745 Query 397012 AGCAACATATTTAATATATTGAGACATTAGTTCAGAATTCATACCAAGAAGTTTACACGG 397071 ||||||| ||| ||||||||| | ||| ||| ||||||||||||| ||| | | || Sbjct 1746 AGCAACAAATTCAATATATTGGGCCATAAGTCTCGAATTCATACCAATAAGATCAACAGG 1805 Query 397072 AAGAGAATCATTAATAAATTCTTCTTCAATTTCAATCGCTTCGTCAATAATTTGGTAAAC 397131 |||||| ||| || ||| | | ||||| ||||| ||||| || ||||| | || Sbjct 1806 AAGAGAGTCACAAAGAAAGTTTCTTTCAACTTCAACAGCTTCTGATATGATTTGTTGTAC 1865 Query 397132 AACAGATTCTTTCAAACGATTATTCAACAATGAATACATAATACAAGCAAGTTCTACATG 397191 || || || | || | | ||| || | |||||||| || |||| Sbjct 1866 TCTAGGAGCTGGTAATTTAAATTTAAGGGCTTTATATATTAAACAAGCAAAATCAGCATG 1925 Query 397192 TTTGTTTTCATCACGAGCAATAAATTGATTTGATATAATTAGACCAGGCATTACATGCAT 397251 |||||||||| ||||| || ||| || | | || ||||||| || | || Sbjct 1926 GAGACCTTCATCACGACTAATAAGTTCATTAGAAAATGTGAGTCCAGGCA-TAAGTCCAC 1984 Query 397252 TTCTCTAGTTTTTAA-CCAGAAAATCGAAGCAAATGAT-CCACTAAAGAAAACGCCTTCT 397309 | ||||||| ||| ||||| | | |||| | | ||| ||| | || ||||| Sbjct 1985 GT------TTTTTAAGCCAAAAAATTGCA-CAAAAGCTACCAGAAAATAGAATTCCTTCA 2037 Query 397310 ACAATAGAGAATGCTACTAATT-TGTGAGCATAAGTCTTATCAGATTTAATCCATTTATT 397368 ||| | ||||| | | ||||| | | |||| ||| ||||| || ||||||||| | Sbjct 2038 ACAGCACAGAAT-CCAATAATTCTTTCAGCAAAAGATCGCTCAGAATTCATCCATTTAGT 2096 Query 397369 ACACCAATCAGCTTTCTTTTT 397389 ||| || ||||||||||| Sbjct 2097 TGCCCATTCTGCTTTCTTTTT 2117 >seq3075 Length=5155 Score = 105 bits (116), Expect = 5e-17 Identities = 134/183 (73%), Gaps = 1/183 (1%) Strand=Plus/Plus Query 870794 AAAATTATTGTCGATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATTGGACATTTA 870853 ||| | ||||| |||| || || ||||| ||||| |||||||||||| ||||||| ||| Sbjct 4795 AAAGTAATTGTAGATTTCTCATCACCAAACATTGCCAAAGAAATGCATGTTGGACACTTA 4854 Query 870854 AGATCAACTATTATTGGTGAATCTATTTGTAGGGTATTAGAAATGTGTGGACACGATGTT 870913 ||||| || ||||||||||| | | ||||| | | ||| | ||| || || Sbjct 4855 AGATCTACAATTATTGGTGATACAACATGTAGAATTCTTGAATATTTAGGATTTGAAGTA 4914 Query 870914 TATCGTATTAATCATGTGGGTGATTGGGGAACTCAATTCGGTATGTTAATTGCTTATATT 870973 | | ||||||| || || |||||||| |||||||| || ||| | |||| ||| || Sbjct 4915 TTAAGAGTTAATCACGTTGGAGATTGGGGTACTCAATTTGGCATGCTTATTGAATAT-TT 4973 Query 870974 AAA 870976 ||| Sbjct 4974 AAA 4976 >seq1457 Length=4574 Score = 105 bits (116), Expect = 5e-17 Identities = 331/503 (66%), Gaps = 15/503 (3%) Strand=Plus/Plus Query 636275 TATTATGATTTCATTCACAAAGAACTTATTACTTTTTCTGTGGATGACGTTCT--TAGAT 636332 |||| |||||| ||||| ||||||||| | || || || ||| | || ||||| Sbjct 1261 TATTTTGATTTTATTCATAAAGAACTTGTA--TTATTTAGTAGATATGATACTACTAGAT 1318 Query 636333 CTGTTCCTAATTTAATGGATGGATTTAAACCATCACATCGCAAAGTATTTTATGGTTCTG 636392 || |||| |||||| | ||||| || ||||| ||| | |||||| ||| || | Sbjct 1319 CTATTCCAAATTTATTAGATGGTTTAAAACCTGGACAAAGAAAAGTACTTTTTGCAACAT 1378 Query 636393 TTGAAAAGAATATTTATAAGCAAGAGATTAAAGTATCAGATTTGACTGGTTTTGTCTC-G 636451 || |||| || || |||| || ||||||| || | || |||||| ||| | | Sbjct 1379 TTAAAAAAAAGCTTAATAATGAAC---TTAAAGTTGCACAATTAGCTGGTTATGTTGCTG 1435 Query 636452 AATATGACGAAATATCATCATGGTGATCAATCATTATCATCAACTATTGTCGGAATGGCT 636511 || || | ||||||||||| || |||||| | |||||||| |||||| Sbjct 1436 AACATAGTGCT-TATCATCATGGAGAATCATCATTGCAAAGTACTATTGTTAATATGGCT 1494 Query 636512 CAAAATTATGTGGGAAGTAACAATCTCAATTTGTTAATGCCATTGGGAATGTTTGGATCT 636571 ||||||| ||| |||||||| ||||| ||| | ||| |||| || ||||| | Sbjct 1495 CAAAATTTTGTTGGAAGTAATAATCTAAATCTATTAGAACCATGTGGTCAATTTGGTAGT 1554 Query 636572 AGATTGACCGGAGGTAAAGATTCAGCGAGTCCTAGGTATTTGAACACTAAATTAGATGAT 636631 ||| || || |||||| || | || | ||| | ||||| || | | Sbjct 1555 AGAAAAGAAGGTGGAAAAGATGCAAGTGCTGCTCGTTATATATTTACTAAGCTATCTAAA 1614 Query 636632 TTGGCAAAGAAAATCTTCATTGATTATGATTTTGATATTCTTCAACATCAGTCAGAAGAT 636691 | | | | | || ||| || |||| | | || || ||| | | | | | ||| Sbjct 1615 TGGACTAGATATATTTTCCCAGAGGCTGATGATCCT-TTATT-AAC-TTATTTATATGAT 1671 Query 636692 AATTG---TCGAATTGAACCTGTTTATTATGCTCCTATTATTCCAATGATACTTGTAAAT 636748 || | | |||||||||| | ||||| | ||| || ||||||||||| | |||||| Sbjct 1672 GATGGACAACAAATTGAACCTTTATATTACGTTCCAATAATTCCAATGATTTTGGTAAAT 1731 Query 636749 GGAGCTGAAGGAATTGGTACTGG 636771 || |||| ||||||||||| || Sbjct 1732 GGTACTGATGGAATTGGTACAGG 1754 >seq853 Length=1605 Score = 104 bits (114), Expect = 2e-16 Identities = 143/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 518177 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 518236 || || |||| ||| || || ||||| |||||||| ||||| ||||| | || || Sbjct 517 CCGTATGCAAGAGCCGCTGCTGTTGGCTCATTAATGATTCTTGTTACATTTAAGCCTGCT 576 Query 518237 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 518296 || || ||||| ||||| ||||| | || ||||| ||||| || || || |||||| Sbjct 577 ATAGAGCCAGCATCCTTAGTTGCTTGACGCTGAGAATCATTAAAGTAAGCTGGCACAGTA 636 Query 518297 ATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTT 518356 ||||| |||| |||| || |||||| ||||| || |||| ||||||||| Sbjct 637 ATAACAGCATGCTTTACACCTCTACCAAGATAAGTTTCGGCAGTTTCTTTCATTTTTTCC 696 Query 518357 AAAATCATTGATGAAATTTG 518376 ||||| | || | |||||| Sbjct 697 AAAATAAATGCTCCAATTTG 716 Score = 91.5 bits (100), Expect = 1e-12 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 322244 CCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCA 322303 |||||||||||||| ||||| ||||| |||||||| ||| | |||| ||| || || Sbjct 517 CCGTATGCAAGAGCCGCTGCTGTTGGCTCATTAATGATTCTTGTTACATTTAAGCCTGCT 576 Query 322304 ATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTA 322363 || ||| ||| ||||||||| | ||| | |||||||| || ||||| |||||| Sbjct 577 ATAGAGCCAGCATCCTTAGTTGCTTGACGCTGAGAATCATTAAAGTAAGCTGGCACAGTA 636 Query 322364 ATAACTGC 322371 ||||| || Sbjct 637 ATAACAGC 644 >seq870 Length=1578 Score = 98.7 bits (108), Expect = 8e-15 Identities = 223/340 (66%), Gaps = 33/340 (10%) Strand=Plus/Plus Query 634316 ATTACTTATGTACCTGGTCTATATAAAATTTATGATGAAGTAATTGTAAATGCGGCAGAT 634375 |||| ||||||||||||| ||||||| |||| ||||||| | | || ||||| || ||| Sbjct 591 ATTAATTATGTACCTGGTTTATATAAGATTTTTGATGAAATCTTAGTTAATGCTGCTGAT 650 Query 634376 CATAA--CAAGAGA-------------------------TGTCAAACATGTAATATTATC 634408 ||| | ||||| | | ||| ||||| | ||| Sbjct 651 GTTAAAGCTAGAGAAATTTCAACTAAAAATAATCATATTTTTGAAAAATGTACTTGTATT 710 Query 634409 AAAGTTGATATCGATC---AAAAAACAGGTCAAATTTCTGTTTGGAATAATGGTGATGGT 634465 |||||||| || || |||||| || ||||| |||| | ||| |||| || || Sbjct 711 AAAGTTGAAATTAATAGAGAAAAAAAAG---AAATTACTGTATTTAATGATGGAGAAGGA 767 Query 634466 ATTGATGTAGCAATTCATAAAGAACATAATATATGGGTACCATCAATGATTTTTGGAGAA 634525 || | | ||| |||| ||||||| | ||| || ||| | | ||||||||| | Sbjct 768 ATACCAATTGAAATACATAGAGAACATCAAGTATATGTTCCAGAATTAATTTTTGGACAT 827 Query 634526 CTTTTAACGTCTACTAATTACGATAAAAACGAGGAAAAAACTGTTGGTGGTAAAAATGGT 634585 | ||||| ||| |||||| ||| | || || || | | | ||| || | ||||||| Sbjct 828 TTATTAACTTCTGATAATTATGATGATAATGAAGATAGAGTTACTGGAGGAAGAAATGGT 887 Query 634586 TTTGGCGCTAAGCTTGCTAATATTTATTCTGTTGAATTTA 634625 ||||| || || ||| ||||||| | ||| ||||||| Sbjct 888 TTTGGAGCAAAACTTACTAATATATTCTCTAAAGAATTTA 927 >seq2925 Length=6523 Score = 86.0 bits (94), Expect = 5e-11 Identities = 127/179 (71%), Gaps = 1/179 (1%) Strand=Plus/Minus Query 668849 TTAAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTCT 668908 |||| |||||||||||| ||| | ||||||||||||| || ||| | || ||| | | Sbjct 3197 TTAA-AGGTAAAGAAGGACGTTTCAGAGGAAATTTGAGTGGTAAAAGAGTTGATTTTAGT 3139 Query 668909 GCACGTACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCCTCTT 668968 | | | || |||||| || |||| || ||||||| | ||||||||| || ||| | Sbjct 3138 GGAAGAACTGTTATTTCTCCTGACCCTAATATTGAAGTTGATGAAGTTGTGGTACCTATG 3079 Query 668969 ATTATTGCTAAAAATCTTACTTTTGACGAAATTGTAACAGAACATAATATTGAGTATTT 669027 || ||||| || || | |||| | ||||| || | | ||||||||| | ||| Sbjct 3078 ATCATTGCAAAGAAATTGACTTATCCCGAAAGAGTTAATGCTATTAATATTGACTCTTT 3020 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780660826554736