Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20parvum_20[genbank_20GCA_5F002093615.1_202017-04- 14] 3,256 sequences; 9,040,186 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq1523 241 2e-58 seq3099 217 2e-51 seq1220 176 6e-39 seq2927 170 2e-37 seq1457 165 1e-35 seq2671 111 2e-19 seq800 107 2e-18 seq3135 91.5 2e-13 seq853 86.0 8e-12 >seq1523 Length=11895 Score = 241 bits (266), Expect = 2e-58 Identities = 441/638 (69%), Gaps = 11/638 (2%) Strand=Plus/Plus Query 7519 TTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTT 7578 |||||| |||| || || |||||||| ||||||||||| | || || || | ||| || Sbjct 1 TTCAATAGTTAATAATGATACATCAAAAGTACCACCACCTAAATCGAAGATCAATACATT 60 Query 7579 CGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATT 7638 | ||| | | |||||||| ||||| || || ||||| || || ||||| || || Sbjct 61 TCTCTCGCCAGTTCCTTTCTTATCAAGACCATAAGCAATAGCAGCTGCAGTTGGCTCGTT 120 Query 7639 AATAATACGAAG-ACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTT 7697 ||| || | | ||| |||| |||||||| | | ||||| || || ||||| || | Sbjct 121 AATGATTCTCATTACA-TTCAAACCAGCAATTGCACCTGCATCCTTTGTTGCTTGACGCT 179 Query 7698 GCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGAT 7757 | || || || || || || || || || || || |||| | | | || ||| | | Sbjct 180 GTGAGTCATTGAAATAAGCTGGAACAGTAACTACAGCGTTCTTAATTTGGCGACCCAAGT 239 Query 7758 ACGATTCCGCGATATCTTTCAT-TTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816 | | ||| | ||| || ||||| ||| |||| |||||| | ||||| |||||||| Sbjct 240 ATGCTTCAGAGATCTCCTTCATCTTTTGTAA-AACCATAGCAGAAATTTCTTCAGCATGG 298 Query 7817 AACTGTTTCGTTTCACCGTTAA--AATCAACTTCAATCATGGGTTTATCCGCAGCACCGG 7874 || | ||| ||||||| ||| | | || || || || || ||| | ||| Sbjct 299 AATTCCTTCTTTTCACC--TAAGTAGTTTACACTGATGATTGGCTTGTCCTTTGGACCTC 356 Query 7875 GGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTC 7934 | || ||| | | ||| | ||||||| ||| || || || |||||||| Sbjct 357 TAACTACTTTAAATGGCCAGTGAGTCATATCACTTTGTACTGCCTGATCATCAAACTTTC 416 Query 7935 TTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCT 7994 | || |||||||| || |||||||||||||| |||| ||||| | || |||||||| Sbjct 417 TACCAATAAGACGTTTAGCATCAAAAACTGTATTTTCTGGGTTTCTAGCAACTTGGTTCT 476 Query 7995 TCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCG 8054 | || || || || |||||||| || | |||| ||||| || || || ||||| || | Sbjct 477 TTGCTGCATCACCAATAAGACGCTC---AGTTTCTGTAAATGCTACATATGATGGTGTTG 533 Query 8055 TTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGC 8114 | || || ||||| ||||| | || ||| ||||| |||||| ||| || || || | Sbjct 534 TACGGTTACCTTGATCGTTTGGAACAATATCTACAGTATCGTTTCTCCATACACCAACAC 593 Query 8115 ACGAATACGTTGTTCCTAAATCAATACCGATTGCTTGA 8152 | || || || || |||||||||||||| || ||| || Sbjct 594 ATGAGTATGTGGTACCTAAATCAATACCAATAGCTGGA 631 >seq3099 Length=2119 Score = 217 bits (240), Expect = 2e-51 Identities = 695/1068 (65%), Gaps = 25/1068 (2%) Strand=Plus/Plus Query 6503 GTTCCTTTCATTTGATAACAGTAGTTTTCGAGACCATTCTTCGCCTCGACCTTTTTCGCG 6562 |||||| ||| | ||| |||||| || | | ||||| ||||| | ||| | Sbjct 1054 GTTCCT--CATGTTATAGAGGTAGTTCTCCAAAGAGTTCTTAGCCTCAATCTTAAGTCTG 1111 Query 6563 TACTTTTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCT 6622 | || ||||| ||| | || || || || ||||| | ||||| |||||| || || Sbjct 1112 TTCTGCTCATCCTCACCCTTGTATTTCTCAGCATCATTAACCATACGTTCAATATCGTCC 1171 Query 6623 TTCGATAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTA 6682 || |||||||| |||||||| || ||||| || ||||| | ||||| | |||| Sbjct 1172 TTTGATAATCTACCCTTATCGTTAGTAATAGTGATCTTGCTGCTCTTACCAGTACTCTTA 1231 Query 6683 TCTTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGT 6742 || ||||| |||||||| |||||||| ||||||| ||| || | || | ||||||| Sbjct 1232 TCAACAGCAGACACATTCAAGATACCATTAGCATCAATATCAAAGGTGACTTCAATTTGT 1291 Query 6743 GGTGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTA 6802 ||| ||| || ||||| | ||||||||| | || || | || || | | |||| Sbjct 1292 GGTACACCTCTTGGTGCTGGTGGAATACCATCAAGATGGAACTTTCCGAGGAGATGGTTA 1351 Query 6803 TCCGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCT 6862 ||| | | | | | ||||| ||||| |||| || || || || ||||| Sbjct 1352 TCCTTAGTCATGGCTCTCTCACCCTCATAAACTTGGATCAAGACACCACTCTGGTTATCA 1411 Query 6863 TGTGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACC 6922 || | ||||| |||| ||||| | ||| || || ||||| | ||||| | Sbjct 1412 GCATAAGTAGTGAAGACTTGTGTCTTCTTTGCTGGGATAGTTGTATTACGTTCAATAAGC 1471 Query 6923 GGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGT 6982 |||||||| |||||| |||||| | || || || | || | || ||||| | | Sbjct 1472 TTGGTCATAACACCACCAGCAGTTTCTAAACCGAGTGATAATGGAGCAACATCCAATAAT 1531 Query 6983 AACAGGTCTTGAACAG-ATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGC 7041 || || || || || | | | | || |||| ||||||| || ||||| || | || Sbjct 1532 AAGAGATCCTGTACGGCAGAGGATTGCT-CACCATTTAAGATAGCAGCTTGTACAGCAGC 1590 Query 7042 CCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATA 7101 || || || || || || || || || || | ||| | |||||||||||||| | Sbjct 1591 ACCATAAGCAACAGCTTCGTCTGGATTGATTGCTTTGCATGGCTCTTTACCGTTAAAGAA 1650 Query 7102 ATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTC 7161 ||| | || |||| || || || ||||| || ||||| ||||| || | || Sbjct 1651 TTCCTGAATCAAGGCCTGAACCTTTGGAATACGTGTAGAACCACCAACCAATACAACATC 1710 Query 7162 ATTCAC---TTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCAT 7218 || || | || || || || | || ||| ||| || || || | | Sbjct 1711 ATGTACAGATCTC---TTGTCCATACCAGCATCCTTGAGTACTTTCTCAACTGGAGCTAA 1767 Query 7219 ACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGG---ATGT 7275 | | |||||| | || || ||||| || || | || | | |||| || Sbjct 1768 AGTTGCACGGAAGTAATCAGCGCAGAGTTCTTCGAATCTAGCTCTACTGATGGCAACTGA 1827 Query 7276 ATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGA 7335 || |||||| || || || | ||||| | ||||| || | ||| | | || || Sbjct 1828 AT---AATCAATACCTTCATAGAGTGAATCTAACTCAATTGTAGCTTGAGTAGAAGATGA 1884 Query 7336 TAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACC 7395 || |||| |||||| ||||| || |||| | | | | || | | || Sbjct 1885 CAAAGTTCTCTTTGCACGCTCGCATTGAGTTCTGAGTCTTCTTAAAGCTCTAGCATTTGT 1944 Query 7396 GG--AAATATCTTTCT-TATGTTTACGTTTAAACTCTT---CAGAGAAGTGTCGAAGGAG 7449 || |||| | || ||| || | || || |||| || |||| | | | ||| Sbjct 1945 GGTTAAATCCATACCTCTATTCTTTCTCTTGAAATCTTGTACACAGAATTCT---ACGAG 2001 Query 7450 TCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAA 7509 ||| ||| |||||||||||||||||||| ||||| || ||||| ||||| |||||||| Sbjct 2002 TCTGTTATCAAAATCTTCACCACCCAAGTGAGTATCACCAGCGGTAGCTTTAACTTCAAA 2061 Query 7510 GATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACC 7557 ||||| ||||||| |||| || || |||||||| ||||||||||| Sbjct 2062 AATACCATCTTCAATAGTTAATAATGATACATCAAAAGTACCACCACC 2109 >seq1220 Length=885 Score = 176 bits (194), Expect = 6e-39 Identities = 385/576 (67%), Gaps = 3/576 (1%) Strand=Plus/Minus Query 105594 GGCTGAAAAGAGGTCTCGACACCTCGCCTCTTCATCACCTTGATTCAAACGAATTTCGAG 105653 ||| | |||||| || ||||| ||| |||||| | || |||||| | ||||| | Sbjct 882 GGCAGGAAAGAGATCGCGACATCTCATCTCTTCCTTTCCGTGATTCTTCCTGATTTCAAT 823 Query 105654 AAAATCGAGAATATCGGCGTGCCATGGTTCTAAATAGACTGCAATAGACCCTTTACGACG 105713 ||| || | || ||| ||||||| || || ||||| | |||||| | |||||||| Sbjct 822 AAACTCTACAACATCAACGTGCCACGGCTCCAAATAAATTGCAATGGCACCTTTACGCTT 763 Query 105714 CCCCGC---TTGATTGACATATCTTGCGGTTGAGTTATACACTCGTAACATTGGAATAAT 105770 ||| | ||||| | ||| || || || ||||| || || | ||| ||||| | Sbjct 762 CCCTCCACCTTGATCAATATACCTAGCAGTGTCATTATAAACGCGCAGCATCGGAATTAA 703 Query 105771 ACCATCGGATGTTCCATTTGTTCCACGAATATGTGATTTATTTGCACGTACATCGTGAAC 105830 |||| ||| | ||||||||||| ||||||| ||| | || | | | || || Sbjct 702 TCCATTAGATCTCCCATTTGTTCCTCGAATATATGAACCAGTTCCTCTAATATTACTCAC 643 Query 105831 GTGTAACCCAATACCCCCAGCCCACTTACTGATACGCGCACACTCTTTTACTGTATCGTA 105890 | ||||| ||| || || |||||| || || || | ||| ||| || | Sbjct 642 TGCCACCCCAAGACCACCCGCAGTCTTACTAATGTTTGCGCATTTAGTTAGTGTGTCAAA 583 Query 105891 AATACCGTCGATACTATCTTCCTTATTCGCAATCAGGAAACACGATGACATTTGTGGTCT 105950 ||||||| || |||||| | || | | ||||| ||||||||||| |||| Sbjct 582 GATACCGTTTATTGAATCTTCTGGAATCCTGAGTAAAAAACAAGATGACATTTGAGGTCG 523 Query 105951 GGGTGTACCAGCATTGAACAGAGTTGGTGTTGCATGAATGAACAAACCTTTCGATAACGC 106010 || || || | ||| || || || |||||||||||| | || | || ||||||| Sbjct 522 TGGAGTGCCTGAATTAAAGAGTGTGGGTGTTGCATGAGTAAAATATTTTTGCGATAACAA 463 Query 106011 TTCGTATGTTTCCAGGACGTGATCAATATCGTGTCCATGAATACCAATAGCGACGCGCAT 106070 || |||||||| || | |||||||| | |||||||||| || ||| ||||| Sbjct 462 CTCATATGTTTCAAGTGCAGCTTCAATATCACCACAATGAATACCACAAGAGACCCGCAT 403 Query 106071 ATAGAGATATTGGGGTGTTTCAATAATTTCACCGTCAATTTTCTGGAGATACCCTTTTTC 106130 |||| ||| ||| |||| | || || ||||||||| | ||||| | |||| Sbjct 402 CAGAAGATGTTGTGGTCTTTCCACAACTTTGTTGTCAATTTTAAGAAGATAGGATCTTTC 343 Query 106131 AAGTGTTTTTAAACCAAAATACCCAAACTCAAAATC 106166 || ||||| || ||||||| | | |||||||| Sbjct 342 TAGAGTTTTGAAGGCAAAATAATCGTATTCAAAATC 307 >seq2927 Length=1520 Score = 170 bits (188), Expect = 2e-37 Identities = 382/572 (67%), Gaps = 9/572 (2%) Strand=Plus/Minus Query 6611 TCAATGTCTTCTTTCGATAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTA 6670 || |||||||| | || | ||| ||||||||||| || || |||||||| ||||||||| Sbjct 1059 TCTATGTCTTCCTGTGAGAGTCTACCCTTATCATTTGTGATAGTAATCTTCTCGGATTTA 1000 Query 6671 CCCGAGGCCTTATCTTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTT 6730 || | ||||||| | ||||| || | |||||||||| | ||||| || || | Sbjct 999 CCAGTACCCTTATCCTTTGCACTAACTTGTAAAATACCATCAGTATCAATTTCAAAAGTA 940 Query 6731 ACATTAATTTGTGGTGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCA 6790 || | |||||| || ||| || || || | ||| || || | | || ||| | ||| Sbjct 939 ACCTCAATTTGGGGAACACCTCTTGGAGCTGGTGGGATTCCAGAAAGCTCGAATTTTCCA 880 Query 6791 AGTAAACTGTTATCCGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCA 6850 || | | |||||||| | | | | ||| ||||| ||||| || | || || || Sbjct 879 AGGAGATTGTTATCCTTAGTCATTGGACGCTCACCCTCATAAACCTGGATAAGTACAGCT 820 Query 6851 GGTTGATTATCTTGTGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTT 6910 || ||||||||||| || ||| | ||| ||||| | ||||| || ||| Sbjct 819 GGCTGATTATCTTGGTAAGTACTGAAAACTTGGCTCTTCTTGGTTGGAACAACAGTGTTT 760 Query 6911 CTCGGAATAACCGGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTC 6970 || ||| | | ||||||| ||||| | ||| || | || | || | ||| || Sbjct 759 CTACCAATGAGCTTTGTCATAACTCCACCAACAGTCTCAATACCTAAAGTTAAAGGAGTA 700 Query 6971 ACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCT 7030 || ||||| | ||| | || || | | |||||||| | |||||| | ||| Sbjct 699 ACATCCAATAATAATAAATC----AC---TAC--CGCCTTCACCTGCTAAGATACCAGCT 649 Query 7031 TGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTA 7090 || || | || || || ||||| || ||||| |||||||| | | || | || || Sbjct 648 TGTACGGCAGCACCATAAGCGACGGCTTCATCTGGGTTAATTCCTCTGTTTGGCTCCTTT 589 Query 7091 CCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACC 7150 || | ||| | ||| | || |||||| || ||||| || || || ||||| ||| Sbjct 588 CCATCAAAGAACTCCTTGATCAAGGCTTGAATCTTAGGGATACGAGTAGAACCACCAACC 529 Query 7151 AAAACGATTTCATTCACTTTCGATTTATCGAT 7182 |||||||| |||| |||| || || | ||| Sbjct 528 AAAACGATCTCATCTACTTCAGACTTTTTGAT 497 >seq1457 Length=4574 Score = 165 bits (182), Expect = 1e-35 Identities = 338/499 (68%), Gaps = 9/499 (2%) Strand=Plus/Minus Query 183161 CCGGTACCAATACCTTCAGTTCCATTTACCAAAACGGTCGGTAATATAGGAACATAATAG 183220 || |||||||| || ||||| ||||||||||||| | || | ||| ||||| ||||| Sbjct 1754 CCTGTACCAATTCCATCAGTACCATTTACCAAAATCATTGGAATTATTGGAACGTAATAT 1695 Query 183221 TCAGGTTCGATTTGTTTACCGTCGTCGTCGAGATAGTTTAATACTGGATCATC----TTT 183276 |||||| ||||||| || || || | | ||| |||||| |||||||| | | Sbjct 1694 AAAGGTTCAATTTGTTGTCCATCATCATATAAATAAGTTAATAAAGGATCATCAGCCTCT 1635 Query 183277 GGGATCAAAAAGTATTCTCGCGTTTTTAGTCAATTTTGTAAATATATACCTGGTTTGACT 183336 |||| ||| ||| || | ||||| | || ||||||||||| | | ||| Sbjct 1634 GGGA---AAATATAT-CTAGTCCATTTAGATAGCTTAGTAAATATATAACGAGCAGCACT 1579 Query 183337 CGCGTCTTTACCACCCATGAGACGTGTACCAAATTGACCACATGGTTCGAGTAAATTAAT 183396 || ||||| ||||| | |||||||||||||||||||||| | || ||| | Sbjct 1578 TGCATCTTTTCCACCTTCTTTTCTACTACCAAATTGACCACATGGTTCTAATAGATTTAG 1519 Query 183397 ATTATTCGACCCCGTAAAATTATGTGCTAATTTTACAATTGTATCTGCCAAAGAGACTTC 183456 |||||| || |||||| || || | || ||||| ||| | ||| || ||| Sbjct 1518 ATTATTACTTCCAACAAAATTTTGAGCCATATTAACAATAGTACTTTGCAATGATGATTC 1459 Query 183457 ACCGTGGTGATACGATGTTTTTTCCGAAACGTATGCGGCTAATTGCGCAACCTTCATTTC 183516 || || ||||| | | | ||| | ||| || | |||||||| ||||| || | ||| Sbjct 1458 TCCATGATGATAAGCACTATGTTCAGCAACATAACCAGCTAATTGTGCAACTTTAAGTTC 1399 Query 183517 AGATGTAAGATTCTTTGTGAAACACGCGTATAACACTTTTCGTTGGGATGGTTTTAAACC 183576 | |||| || ||| | || || | | ||||||| ||| ||||||||||| Sbjct 1398 ATTATTAAGCTTTTTTTTAAATGTTGCAAAAAGTACTTTTCTTTGTCCAGGTTTTAAACC 1339 Query 183577 ATCTGAAACGTGTGCAATCGACCTTTTCAAATCAGCAAGACTGAAATTTACAAGATCTTT 183636 |||| | | | || ||| || || | |||| ||| || |||||| ||||| Sbjct 1338 ATCTAATAAATTTGGAATAGATCTAGTAGTATCATATCTACTAAATAATACAAGTTCTTT 1279 Query 183637 ATGAATAAAATCAGAAATA 183655 ||||||||||||| ||||| Sbjct 1278 ATGAATAAAATCA-AAATA 1261 >seq2671 Length=695 Score = 111 bits (122), Expect = 2e-19 Identities = 154/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 7636 ATTAATAATACGAAG-ACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTC 7694 |||||||||||||| ||| |||| || ||||||| | ||||| || || || || | Sbjct 695 ATTAATAATACGAATTACA-TTCAAACCGGCAATAGCACCAGCATCCTTGGTAGCCTGAC 637 Query 7695 GTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGA 7754 | || | ||| |||||||| || ||||| || | || || | | | |||| |||||||| Sbjct 636 GCTGAGCATCATTAAAGTAAGCTGGGACAGTAATAACTGCATGCTTTACTTCCTTACCGA 577 Query 7755 GATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCG 7814 |||| | || || || || ||||| ||| | ||||| | ||||| |||||| | | Sbjct 576 GATAAGCCTCAGCAATTTCCTTCATCTTGACCAAGACCATAGCTGAAACCTCTTCTGGGG 517 Query 7815 CAAACTGTTTCGTTTCACCGTTAAAATCAACTT 7847 | || || ||| | ||||| |||| | ||||| Sbjct 516 CTAATTGCTTCTTCTCACCCTTAACAGAAACTT 484 >seq800 Length=549 Score = 107 bits (118), Expect = 2e-18 Identities = 210/303 (69%), Gaps = 13/303 (4%) Strand=Plus/Plus Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748 |||| ||||||| ||| ||||||||||||| ||| || | || | |||||| | ||| Sbjct 108 GCACCAACATTCATAATTCCATTTGCATCAATATCAAAGGTGACTTCAATTTGAG--GTA 165 Query 6749 CCCCTC--GGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCG 6806 |||||| ||||| | ||||| ||| | | |||||| ||||| || | ||||| | Sbjct 166 CCCCTCTGGGTGCTGGAGGAATTCCCATCATTTCAAATTGTCCAAGCAACTTATTATCAG 225 Query 6807 TCGC--CTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTG 6864 || |||| | ||| |||| | ||||||||| || || |||||| ||| Sbjct 226 CAGCAAATTCT--CTTTCTCCTTGGAAAACTTTAATTCCAACTTGAGTTTGATTGTCTGC 283 Query 6865 TGCCGTTGAGAAGA-TTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCG 6923 || || ||||| | || | ||||| |||| || || || |||||||| ||| | Sbjct 284 AGCAGTGGAGAATACTTGGCTCTTT-TTAGTAGGTATTGTGGTATTTCTGTTAATTAATC 342 Query 6924 GGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTA 6983 | || | || ||||||| |||||| | || | ||| | ||||| ||||| ||||| Sbjct 343 GAGTAAAAACTCCACCCAAAGTTTCAATACCTAAAGATAAGGGTGTAACGTC---GAGTA 399 Query 6984 ACA 6986 ||| Sbjct 400 ACA 402 >seq3135 Length=1315 Score = 91.5 bits (100), Expect = 2e-13 Identities = 168/241 (70%), Gaps = 9/241 (4%) Strand=Plus/Plus Query 11445 TTTCTTACCAATCGCATCAATTTCATCTATAAAGATAATACACG--GTTGATTTTCACGT 11502 |||||| |||| |||||||||||||| ||||| | ||||| | | | ||||| | | Sbjct 993 TTTCTT-CCAACTGCATCAATTTCATCAATAAAAACAATACTTGGAGATAATTTT--CTT 1049 Query 11503 GCCAATTCAAATATATCACGGACTCTTTTTGCGCCTACGCCTACAAACATTTCAACGAAC 11562 ||| | ||||| || | ||||| |||| || | || ||||| || |||| || Sbjct 1050 GCCTGTGAAAATAATTCTCTTACTCTACTTGCACCCATTCCAACAAAAATCTCAATAAA- 1108 Query 11563 GATGAC--CCCGAACACTGAATAAAAGGAACGGAAGATTCACCCGCTATAGCACGTGCTA 11620 || || || || | || ||| || || || |||||| || | ||| ||| | Sbjct 1109 -ATCACTTCCAGATATATAAAAAAATGGTACATTAGCTTCACCAGCAACAGCTTTTGCCA 1167 Query 11621 AAAGTGTTTTACCTGTACCTGGTTTACCTGTTAATAATGCACCCCTTGGTATTTTAGCAC 11680 | | ||||||||| ||||||||| ||| ||||| ||||| |||||||||| |||| Sbjct 1168 ATAATGTTTTACCGGTACCTGGTGGTCCTACCAATAAAGCACCTTTTGGTATTTTTGCAC 1227 Query 11681 C 11681 | Sbjct 1228 C 1228 >seq853 Length=1605 Score = 86.0 bits (94), Expect = 8e-12 Identities = 197/291 (68%), Gaps = 8/291 (3%) Strand=Plus/Plus Query 7493 GTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCA 7552 || ||||| |||||||| | || || ||| | ||| | |||| ||| || ||||| Sbjct 409 GTTGCTTTAACTTCAAACACTCCGCCAAGAATCTCTAAAATAGAAATATCGAAAGTACCT 468 Query 7553 CCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTAC 7612 || |||| ||| ||| | || | || | | | ||| | | || || | ||||| Sbjct 469 CCTCCCAAATCATAAAC---TGCGATTGTTTTGCCATCT--GCTTTT-TCCATTCCGTAT 522 Query 7613 GCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAG-ACAGTTCAGGCCAGCAATAGT 7671 || | |||||| || ||||| |||||||| || | ||| || || || || |||| Sbjct 523 GCAAGAGCCGCTGCTGTTGGCTCATTAATGATTCTTGTTACATTTAAG-CCTGCTATAGA 581 Query 7672 TGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGAC 7731 | ||||| || || ||||| || || ||||| |||||||| || || || || | || Sbjct 582 GCCAGCATCCTTAGTTGCTTGACGCTGAGAATCATTAAAGTAAGCTGGCACAGTAATAAC 641 Query 7732 CGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTT 7782 || | | | || |||| ||||| | ||| || | ||||||||||| Sbjct 642 AGCATGCTTTACACCTCTACCAAGATAAGTTTCGGCAGTTTCTTTCATTTT 692 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635106950095040