Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20parvum_20[genbank_20GCA_5F002093615.1_202017-04- 14] 3,256 sequences; 9,040,186 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq2837 140 6e-28 >seq2837 Length=6166 Score = 140 bits (154), Expect = 6e-28 Identities = 164/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 193130 TATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTC 193189 || ||| ||||| | || | ||| | |||||| || | ||| || ||||| ||||| Sbjct 5945 TACACCGCCTCTAAGTCTTAATACTAAATGCAAAGTGGACTCCTTCTGGATATTGTAGTC 6004 Query 193190 GGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGG 193249 |||| |||||| ||| || ||||| ||||| ||||| || | | |||||||||||| Sbjct 6005 AGATAGAGTTCTACCATCTTCCAATTGCTTTCCAGCAAAGATCAGACGCTGTTGATCAGG 6064 Query 193250 AGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTC 193309 ||| || || || ||||| || || || | |||| ||| |||||||||||||| || Sbjct 6065 AGGAATACCCTCCTTATCCTGGATCTTTGCCTTTACATTCTCAATAGTATCGGAAGGTTC 6124 Query 193310 AACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAA 193351 |||||| | || || || || ||||||| ||||| ||||| Sbjct 6125 AACTTCCAATGTGATGGTCTTTCCTGTTAAAGTTTTGACAAA 6166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899617784065920