Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20parvum_20[genbank_20GCA_5F002093615.1_202017-04- 14] 3,256 sequences; 9,040,186 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq2837 127 3e-24 >seq2837 Length=6166 Score = 127 bits (140), Expect = 3e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 146046 AAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACGATACTATTCAAAAT 146105 ||||| ||||||||||| || || || | || || |||| | |||||||||| | ||| Sbjct 6160 AAAACTTTAACAGGAAAGACCATCACATTGGAAGTTGAACCTTCCGATACTATTGAGAAT 6101 Query 146106 GTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTT 146165 ||||| || || || ||| || || ||||| || |||||||| | || || ||| Sbjct 6100 GTAAAGGCAAAGATCCAGGATAAGGAGGGTATTCCTCCTGATCAACAGCGTCTGATCTTT 6041 Query 146166 GCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATATACAAAAAGAATCG 146225 || || || ||||| || ||| |||||| || | || || ||||| || || || || Sbjct 6040 GCTGGAAAGCAATTGGAAGATGGTAGAACTCTATCTGACTACAATATCCAGAAGGAGTCC 5981 Query 146226 ACTATCCATTTAGTATTACGATTAAGAGGAGGT 146258 ||| | |||||||||||| || | ||||| ||| Sbjct 5980 ACTTTGCATTTAGTATTAAGACTTAGAGGCGGT 5948 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786134403027520