Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20parvum_20[genbank_20GCA_5F002093615.1_202017-04- 14] 3,256 sequences; 9,040,186 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq3099 322 4e-82 seq1523 244 8e-59 seq2671 149 5e-30 seq800 147 2e-29 seq2559 109 4e-18 seq3075 105 5e-17 seq1457 105 5e-17 seq853 100 2e-15 seq870 98.7 7e-15 >seq3099 Length=2119 Score = 322 bits (356), Expect = 4e-82 Identities = 670/986 (68%), Gaps = 19/986 (2%) Strand=Plus/Plus Query 281329 AGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTCCGCGATTATTAGTAAT 281388 ||| || ||| ||| | ||||| | || | || ||||| || || |||||||| Sbjct 1141 AGCATCATTAACCATACGTTCAATATCGTCCTTTGATAATCTACCCTTATCGTTAGTAAT 1200 Query 281389 AGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGAATACCATT 281448 ||| || || || || || |||||| | |||| |||||| | |||||||| Sbjct 1201 AGTGATCTTGCTGCTCTTACCAGTACTCTTATCAACAGCAGACACATTCAAGATACCATT 1260 Query 281449 GGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCC 281508 ||||| | |||||| |||||||||||||| || || ||||| | || ||||| || || Sbjct 1261 AGCATCAATATCAAAGGTGACTTCAATTTGTGGTACACCTCTTGGTGCTGGTGGAATACC 1320 Query 281509 TTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAA 281568 || | || || |||| || || ||||| ||||| | || |||||||| | Sbjct 1321 ATCAAGATGGAACTTTCCGAGGAGATGGTTATCCTTAGTCATGGCTCTCTCACCCTCATA 1380 Query 281569 AATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATAC-TCTGGATTTTT 281627 || |||||| || || | || ||||| | |||||| || || || | || || || Sbjct 1381 AACTTGGATCAAGACACCACTCTGGTTATCAGCATAAGTAGTGAAGACTTGTGTCTTCTT 1440 Query 281628 TACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGCTGTTTCTA 281687 | | || || ||||| || | ||||||| |||||||||| ||||||||| ||||||| Sbjct 1441 TGC-TGGGATAGTTGTATTACGTTCAATAAGCTTGGTCATAACACCACCAGCAGTTTCTA 1499 Query 281688 AACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTT 281747 |||| || || | |||| ||||| | || | | || | || || | || Sbjct 1500 AACCGAGTGATAATGGAGCAACATCCAATAATAAGAGATCCT---GTACGGCAGAGGATT 1556 Query 281748 G---ACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGAT 281804 | |||| | ||||| ||||| | |||||||||||| ||||||||||| || |||| Sbjct 1557 GCTCACCATTTAAGATAGCAGCTTGTACAGCAGCACCATAAGCAACAGCTTCGTCTGGAT 1616 Query 281805 TAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATT--TGAAAGAAGTTGTCT-TACCT 281861 | | | || | | | |||||| || ||| |||| |||| ||| | || |||| Sbjct 1617 TGATTGCTTTGCATGGCTCTTTACCGTT-AAAGAATTCCTGAATCAAG--GCCTGAACCT 1673 Query 281862 TAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTT 281921 | |||||||| | || || ||||| ||||||| ||||| || | || |||| Sbjct 1674 TTGGAATACGTGTAGAACCACCAACCAATACAACATCATGTACAGATCTCTTGTCCATAC 1733 Query 281922 TTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTGAACAAA 281981 | |||| | ||||| ||||| || | | | || | || | || | || | Sbjct 1734 CAGCATCCTTGAGTACTTTCTCAACTGGAGCTAAAGTTGCACGGAAGTAATCAGCGCAGA 1793 Query 281982 GTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAACAAAGAAT 282041 ||||||||||| |||||||| | | | || ||||||||| ||||| | | |||| Sbjct 1794 GTTCTTCGAATCTAGCTCTACTGATGGCAACTGAATAATCAATACCTTCATAGAGTGAAT 1853 Query 282042 CAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTG 282101 | | ||||| |||| |||||| ||||| || | | | || ||||| || ||| | Sbjct 1854 CTAACTCAATTGTAGCTTGAGTAGAAGATGACAAAGTTCTCTTTGCACGCTCGCATTGAG 1913 Query 282102 TCCTTAGTCTTCGTAAGGCTTTTGC-TGATTGATTCAAATCTGT---TTTATATTTTCTC 282157 | || ||||||| ||| ||| | || | || || ||||| | | ||| |||||| Sbjct 1914 TTCTGAGTCTTCTTAAAGCTCTAGCATTTGTGGTT-AAATCCATACCTCTATTCTTTCTC 1972 Query 282158 TTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTA 282217 |||||||||| ||||| || ||| || | ||||||||||||||||| ||||| | | Sbjct 1973 TTGAAATCTTGTACACAGAATTCTACGAGTCTGTTATCAAAATCTTCACCACCCAAGTGA 2032 Query 282218 GTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACA 282277 |||| || | |||||| | |||| |||| |||||||||| || || | | ||| Sbjct 2033 GTATCACCAGCGGTAGCTTTAACTTCAAAAATACCATCTTCAATAGTTAATAATGATACA 2092 Query 282278 TCATGGGTTCCACCACCCATATCAAA 282303 ||| || |||||||| | ||| || Sbjct 2093 TCAAAAGTACCACCACCTAAATCGAA 2118 >seq1523 Length=11895 Score = 244 bits (270), Expect = 8e-59 Identities = 430/616 (70%), Gaps = 19/616 (3%) Strand=Plus/Plus Query 282275 ACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTC--TTGGT 282332 |||||| || |||||||| | ||| || || | |||||| | || | | || | Sbjct 20 ACATCAAAAGTACCACCACCTAAATCGAAGATCAATACATTTCTCTC---GCCAGTTCCT 76 Query 282333 TT-TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391 || |||||||||||||| |||| |||||| |||||||| || ||||| ||||||| ||| Sbjct 77 TTCTTATCAAGACCATAAGCAATAGCAGCTGCAGTTGGCTCGTTAATGATTCTCATTACA 136 Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451 || | |||||||||| |||||||| || || ||||| | ||||| || || ||||| Sbjct 137 TTCAAACCAGCAATTGCACCTGCATCCTTTGTTGCTTGACGCTGTGAGTCATTGAAATAA 196 Query 282452 GCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGC--GCTT--GCTGT 282507 || |||||||||| || || | | ||| || | | | ||| |||| | | Sbjct 197 GCTGGAACAGTAACTACAGCGT-TCTTAATT---TGGCGACCCAAGTATGCTTCAGAGAT 252 Query 282508 TTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTGCTTGGATTC 282567 | ||||| || ||||| ||| | ||||||| ||| | | ||| ||| ||| Sbjct 253 CTCCTTCATCTTTTGTAAAACCATAGCAGAAATTTCTTCAGCATGGAATTCCTTCTTTTC 312 Query 282568 ATTTTGATATGATACT-TCAAAATATGGTTTAT---TACCAACATTAATAACTTTAAATG 282623 | | || ||| | | || ||| || | | | | ||| |||||||||| Sbjct 313 ACCTAAGTAGTTTACACTGATGAT-TGGCTTGTCCTTTGGACCTCTAACTACTTTAAATG 371 Query 282624 GCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTT 282683 |||| | ||||||| ||| || || |||| ||| | ||||||||| | |||| Sbjct 372 GCCAGTGAGTCATATCACTTTGTACTGCCTGATCATCAAACTTTCTACCAATAAGACGTT 431 Query 282684 TTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAA 282743 | |||||||||| ||||| ||| || ||| |||| | || |||||||| |||| Sbjct 432 TAGCATCAAAAACTGTATTTTCTGGGTTTCTAGCAACTTGGTTCTTTGCTGCATCACCAA 491 Query 282744 TCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCAT 282803 | ||| | || || |||||||||| ||||||||||| ||||| || ||||||||||| | Sbjct 492 TAAGACGCTCAGTTTCTGTAAATGCTACATATGATGGTGTTGTACGGTTACCTTGATCGT 551 Query 282804 TCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTA 282863 | | || ||| || || || | ||| ||||||||| ||||| | || || |||| Sbjct 552 TTGGAACAATATCTACAGTATCGTTTCTCCATACACCAACACATGAGTATGTGGTACCTA 611 Query 282864 AATCAATACCAATAGC 282879 |||||||||||||||| Sbjct 612 AATCAATACCAATAGC 627 Score = 96.9 bits (106), Expect = 3e-14 Identities = 104/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 86118 ACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGC 86177 ||| || |||| ||| ||||||||||| || ||||| ||| | | |||| ||||| || Sbjct 88 ACCATAAGCAATAGCAGCTGCAGTTGGCTCGTTAATGATTCTCATTACATTCAAACCAGC 147 Query 86178 AATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGT 86237 |||| | | | ||| |||||||| | ||||| |||||| ||||| ||||| ||||| Sbjct 148 AATTGCACCTGCATCCTTTGTTGCTTGACGCTGTGAGTCATTGAAATAAGCTGGAACAGT 207 Query 86238 AATAACTGCTTTATTAAT 86255 || || || || ||||| Sbjct 208 AACTACAGCGTTCTTAAT 225 >seq2671 Length=695 Score = 149 bits (164), Expect = 5e-30 Identities = 338/506 (67%), Gaps = 2/506 (0%) Strand=Plus/Minus Query 282373 ATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCT 282432 ||||||||| | | ||||| | ||| ||||| || ||||| || || || || | Sbjct 695 ATTAATAATACGAATTACATTCAAACCGGCAATAGCACCAGCATCCTTGGTAGCCTGACG 636 Query 282433 TTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAAT 282492 || | ||| ||||| || || || ||||||||||| |||| ||||||| || || | Sbjct 635 CTGAGCATCATTAAAGTAAGCTGGGACAGTAATAACTGCATGCTTTACTTCCTTACCGAG 576 Query 282493 ATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGA 282552 |||||| || ||| ||||| || || | ||| | ||||| | |||||| | Sbjct 575 ATAAGCCTCAGCAATTTCCTTCATCTTGACCAAGACCATAGCTGAAACCTCTTCTGGGGC 516 Query 282553 ATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAAT 282612 ||||||| ||| | | || |||| | || || || || | ||||| Sbjct 515 TAATTGCTTCTTCTCACCCTTAACAGAAACTTGTATGTAAGGCTTGCTATCTTTGTTAAT 456 Query 282613 AACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACC 282672 || | | |||| | || |||| ||| || | || ||||| | ||| Sbjct 455 AATCTCATATGGTAGCAAAGTCTTATCCTTTTGGACGGAATCATCCTTAAAGCGACGACC 396 Query 282673 AATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGC 282732 ||| | || ||| |||| || | ||| | |||||| | | |||||||| ||||| Sbjct 395 AATAAGTCTCTTTACATCGAACAAAGTCTGAACTGGATTGATAGTAGCTTGATTCTTGGC 336 Query 282733 TGCATCTCCAATCAGATGTTCTGTC-TCTGTAAATGAAACATATGATGGAGTTGTGCGAT 282791 || || ||||||| || | || || || ||||| ||||||||||| || | |||| Sbjct 335 TGATTCACCAATCA-ATCTCTCATCATCAGTGAATGATACATATGATGGTGTAATACGAT 277 Query 282792 TACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAA 282851 ||||||| ||||| | |||||| || ||| ||||||| | | | ||| ||||| | Sbjct 276 TACCTTGTTCATTTGGAATAATCTCTACTCTACCATTCTTGTAGATACCAACACATGAAT 217 Query 282852 AAGTTGTTCCTAAATCAATACCAATA 282877 |||| || |||||||| ||||||||| Sbjct 216 AAGTAGTACCTAAATCGATACCAATA 191 >seq800 Length=549 Score = 147 bits (162), Expect = 2e-29 Identities = 336/493 (68%), Gaps = 27/493 (5%) Strand=Plus/Plus Query 281322 ATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTCCGCGATTAT 281381 |||||| ||||||||| |||||| ||||||||| | | || | | ||| || || Sbjct 7 ATTCTTCAGCTTCTCTGATCATTTTCTCAATTTCAGCACCACTTAGACCTCCA-GAAGAT 65 Query 281382 TAGTAATAGTAATATTCTTGGATTTGTTT---GTTGATTTATCAGCGGCAGTCACATTAA 281438 | |||||| || | | || ||| ||| ||||| |||||| ||| ||||| | Sbjct 66 TG--AATAGTGATCT-CGTG--TTTCTTTCCAGTTGACTTATCAATTGCACCAACATTCA 120 Query 281439 GAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAG 281498 ||| ||||| ||||| | |||||| ||||||||||||||||| |||||||| | || | Sbjct 121 TAATTCCATTTGCATCAATATCAAAGGTGACTTCAATTTGAGGTACCCCTCTGGGTGCTG 180 Query 281499 GTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTT 281558 | || || || || | |||| ||| || |||||||| || |||| || || Sbjct 181 GAGGAATTCCCATCATTTCAAATTGTCCAAGCAACTTATTATCAGCAGCAAATTCTCTTT 240 Query 281559 CACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTC 281618 | || | ||||| || || |||| ||||||||| |||| | ||| | |||||| Sbjct 241 CTCCTTGGAAAACTTTAATTCCAACTTGAGTTTGATTGTCTGCAGCAGTGGAGAATACT- 299 Query 281619 TGGAT-TTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTG-GTCATAATACCACC 281676 ||| | |||||| ||| ||||| || ||||| | ||| | || | || | || ||||| Sbjct 300 TGGCTCTTTTTAGTAGGTATTGTGGTATTTCTGTTAATTA-ATCGAGTAAAAACTCCACC 358 Query 281677 AGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT-TTTGAAGTT 281735 ||||| | ||| | ||| | || || || || | || | || || |||| Sbjct 359 CAAAGTTTCAATACCTAAAGATAAGGGTGTAACGTCGAGTAACAAAAGATCCTTGA---- 414 Query 281736 TTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTT 281795 || | ||| ||| || | | ||||| |||||||| || ||||||||||| Sbjct 415 --TCTCCCCTTT---CAA----AACACCAGCTTGTATAGCAGCTCCCATTGCAACAGCTT 465 Query 281796 CATCAGGATTAAC 281808 | ||||| ||||| Sbjct 466 CGTCAGGGTTAAC 478 >seq2559 Length=3356 Score = 109 bits (120), Expect = 4e-18 Identities = 295/441 (67%), Gaps = 14/441 (3%) Strand=Plus/Plus Query 161051 TCGAATGGATTATCAACATTGAAT-TTTTTGCGATAACCAAGATCTACAAGTAATCTGTC 161109 || || |||||| ||| ||| | |||||| ||| ||||| | | ||||||||| || Sbjct 1687 TCAAAAGGATTAGAAACGTTGTAGATTTTTGGAATATCCAAGG-CAAAAAGTAATCTATC 1745 Query 161110 AGCAACATATTTAATATATTGAGACATTAGTTCAGAATTCATACCAAGAAGTTTACACGG 161169 ||||||| ||| ||||||||| | ||| ||| ||||||||||||| ||| | | || Sbjct 1746 AGCAACAAATTCAATATATTGGGCCATAAGTCTCGAATTCATACCAATAAGATCAACAGG 1805 Query 161170 AAGAGAATCATTAATAAATTCTTCTTCAATTTCAATCGCTTCGTCAATAATTTGGTAAAC 161229 |||||| ||| || ||| | | ||||| ||||| ||||| || ||||| | || Sbjct 1806 AAGAGAGTCACAAAGAAAGTTTCTTTCAACTTCAACAGCTTCTGATATGATTTGTTGTAC 1865 Query 161230 AACAGATTCTTTCAAACGATTATTCAACAATGAATACATAATACAAGCAAGTTCTACATG 161289 || || || | || | | ||| || | |||||||| || |||| Sbjct 1866 TCTAGGAGCTGGTAATTTAAATTTAAGGGCTTTATATATTAAACAAGCAAAATCAGCATG 1925 Query 161290 TTTGTTTTCATCACGAGCAATAAATTGATTTGATATAATTAGACCAGGCATTACATGCAT 161349 |||||||||| ||||| || ||| || | | || ||||||| || | || Sbjct 1926 GAGACCTTCATCACGACTAATAAGTTCATTAGAAAATGTGAGTCCAGGCA-TAAGTCCAC 1984 Query 161350 TTCTCTAGTTTTTAA-CCAGAAAATCGAAGCAAATGAT-CCACTAAAGAAAACGCCTTCT 161407 | ||||||| ||| ||||| | | |||| | | ||| ||| | || ||||| Sbjct 1985 GT------TTTTTAAGCCAAAAAATTGCA-CAAAAGCTACCAGAAAATAGAATTCCTTCA 2037 Query 161408 ACAATAGAGAATGCTACTAATT-TGTGAGCATATGTCTTATCAGATTTAATCCATTTATT 161466 ||| | ||||| | | ||||| | | |||| | | ||||| || ||||||||| | Sbjct 2038 ACAGCACAGAAT-CCAATAATTCTTTCAGCAAAAGATCGCTCAGAATTCATCCATTTAGT 2096 Query 161467 ACACCAATCAGCTTTCTTTTT 161487 ||| || ||||||||||| Sbjct 2097 TGCCCATTCTGCTTTCTTTTT 2117 >seq3075 Length=5155 Score = 105 bits (116), Expect = 5e-17 Identities = 134/183 (73%), Gaps = 1/183 (1%) Strand=Plus/Plus Query 637117 AAAATTATTGTCGATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATTGGACATTTA 637176 ||| | ||||| |||| || || ||||| ||||| |||||||||||| ||||||| ||| Sbjct 4795 AAAGTAATTGTAGATTTCTCATCACCAAACATTGCCAAAGAAATGCATGTTGGACACTTA 4854 Query 637177 AGATCAACTATTATTGGTGAATCTATTTGTAGGGTATTAGAAATGTGTGGACACGATGTT 637236 ||||| || ||||||||||| | | ||||| | | ||| | ||| || || Sbjct 4855 AGATCTACAATTATTGGTGATACAACATGTAGAATTCTTGAATATTTAGGATTTGAAGTA 4914 Query 637237 TATCGTATTAATCATGTGGGTGATTGGGGAACTCAATTCGGTATGTTAATTGCTTATATT 637296 | | ||||||| || || |||||||| |||||||| || ||| | |||| ||| || Sbjct 4915 TTAAGAGTTAATCACGTTGGAGATTGGGGTACTCAATTTGGCATGCTTATTGAATAT-TT 4973 Query 637297 AAA 637299 ||| Sbjct 4974 AAA 4976 >seq1457 Length=4574 Score = 105 bits (116), Expect = 5e-17 Identities = 331/503 (66%), Gaps = 15/503 (3%) Strand=Plus/Plus Query 401131 TATTATGATTTCATTCACAAAGAACTTATTACTTTTTCTGTGGATGACGTTCT--TAGAT 401188 |||| |||||| ||||| ||||||||| | || || || ||| | || ||||| Sbjct 1261 TATTTTGATTTTATTCATAAAGAACTTGTA--TTATTTAGTAGATATGATACTACTAGAT 1318 Query 401189 CTGTTCCTAATTTAATGGATGGATTTAAACCATCACATCGCAAAGTATTTTATGGTTCTG 401248 || |||| |||||| | ||||| || ||||| ||| | |||||| ||| || | Sbjct 1319 CTATTCCAAATTTATTAGATGGTTTAAAACCTGGACAAAGAAAAGTACTTTTTGCAACAT 1378 Query 401249 TTGAAAAGAATATTTATAAGCAAGAGATTAAAGTATCAGATTTGACTGGTTTTGTCTC-G 401307 || |||| || || |||| || ||||||| || | || |||||| ||| | | Sbjct 1379 TTAAAAAAAAGCTTAATAATGAAC---TTAAAGTTGCACAATTAGCTGGTTATGTTGCTG 1435 Query 401308 AATATGACGAAATATCATCATGGTGATCAATCATTATCATCAACTATTGTCGGAATGGCT 401367 || || | ||||||||||| || |||||| | |||||||| |||||| Sbjct 1436 AACATAGTGCT-TATCATCATGGAGAATCATCATTGCAAAGTACTATTGTTAATATGGCT 1494 Query 401368 CAAAATTATGTGGGAAGTAACAATCTCAATTTGTTAATGCCATTGGGAATGTTTGGATCT 401427 ||||||| ||| |||||||| ||||| ||| | ||| |||| || ||||| | Sbjct 1495 CAAAATTTTGTTGGAAGTAATAATCTAAATCTATTAGAACCATGTGGTCAATTTGGTAGT 1554 Query 401428 AGATTGACCGGAGGTAAAGATTCAGCGAGTCCTAGGTATTTGAACACTAAATTAGATGAT 401487 ||| || || |||||| || | || | ||| | ||||| || | | Sbjct 1555 AGAAAAGAAGGTGGAAAAGATGCAAGTGCTGCTCGTTATATATTTACTAAGCTATCTAAA 1614 Query 401488 TTGGCAAAGAAAATCTTCATTGATTATGATTTTGATATTCTTCAACATCAGTCAGAAGAT 401547 | | | | | || ||| || |||| | | || || ||| | | | | | ||| Sbjct 1615 TGGACTAGATATATTTTCCCAGAGGCTGATGATCCT-TTATT-AAC-TTATTTATATGAT 1671 Query 401548 AATTG---TCGAATTGAACCTGTTTATTATGCTCCTATTATTCCAATGATACTTGTAAAT 401604 || | | |||||||||| | ||||| | ||| || ||||||||||| | |||||| Sbjct 1672 GATGGACAACAAATTGAACCTTTATATTACGTTCCAATAATTCCAATGATTTTGGTAAAT 1731 Query 401605 GGAGCTGAAGGAATTGGTACTGG 401627 || |||| ||||||||||| || Sbjct 1732 GGTACTGATGGAATTGGTACAGG 1754 >seq853 Length=1605 Score = 100 bits (110), Expect = 2e-15 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 282344 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 282403 || || |||| ||| || || ||||| |||||||| ||||| ||||| | || || Sbjct 517 CCGTATGCAAGAGCCGCTGCTGTTGGCTCATTAATGATTCTTGTTACATTTAAGCCTGCT 576 Query 282404 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 282463 || || ||||| ||||| ||||| | || ||||| ||||| || || || |||||| Sbjct 577 ATAGAGCCAGCATCCTTAGTTGCTTGACGCTGAGAATCATTAAAGTAAGCTGGCACAGTA 636 Query 282464 ATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTT 282523 ||||| |||| |||| || | |||| ||||| || |||| ||||||||| Sbjct 637 ATAACAGCATGCTTTACACCTCTACCAAGATAAGTTTCGGCAGTTTCTTTCATTTTTTCC 696 Query 282524 AAAATCATTGATGAAATTTGTTCTGGAGAATAT 282556 ||||| | || | |||||| |||| |||| Sbjct 697 AAAATAAATGCTCCAATTTGACTTGGACTATAT 729 Score = 91.5 bits (100), Expect = 1e-12 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 86119 CCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCA 86178 |||||||||||||| ||||| ||||| |||||||| ||| | |||| ||| || || Sbjct 517 CCGTATGCAAGAGCCGCTGCTGTTGGCTCATTAATGATTCTTGTTACATTTAAGCCTGCT 576 Query 86179 ATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTA 86238 || ||| ||| ||||||||| | ||| | |||||||| || ||||| |||||| Sbjct 577 ATAGAGCCAGCATCCTTAGTTGCTTGACGCTGAGAATCATTAAAGTAAGCTGGCACAGTA 636 Query 86239 ATAACTGC 86246 ||||| || Sbjct 637 ATAACAGC 644 >seq870 Length=1578 Score = 98.7 bits (108), Expect = 7e-15 Identities = 223/340 (66%), Gaps = 33/340 (10%) Strand=Plus/Plus Query 399172 ATTACTTATGTACCTGGTCTATATAAAATTTATGATGAAGTAATTGTAAATGCGGCAGAT 399231 |||| ||||||||||||| ||||||| |||| ||||||| | | || ||||| || ||| Sbjct 591 ATTAATTATGTACCTGGTTTATATAAGATTTTTGATGAAATCTTAGTTAATGCTGCTGAT 650 Query 399232 CATAA--CAAGAGA-------------------------TGTCAAACATGTAATATTATC 399264 ||| | ||||| | | ||| ||||| | ||| Sbjct 651 GTTAAAGCTAGAGAAATTTCAACTAAAAATAATCATATTTTTGAAAAATGTACTTGTATT 710 Query 399265 AAAGTTGATATCGATC---AAAAAACAGGTCAAATTTCTGTTTGGAATAATGGTGATGGT 399321 |||||||| || || |||||| || ||||| |||| | ||| |||| || || Sbjct 711 AAAGTTGAAATTAATAGAGAAAAAAAAG---AAATTACTGTATTTAATGATGGAGAAGGA 767 Query 399322 ATTGATGTAGCAATTCATAAAGAACATAATATATGGGTACCATCAATGATTTTTGGAGAA 399381 || | | ||| |||| ||||||| | ||| || ||| | | ||||||||| | Sbjct 768 ATACCAATTGAAATACATAGAGAACATCAAGTATATGTTCCAGAATTAATTTTTGGACAT 827 Query 399382 CTTTTAACGTCTACTAATTACGATAAAAACGAGGAAAAAACTGTTGGTGGTAAAAATGGT 399441 | ||||| ||| |||||| ||| | || || || | | | ||| || | ||||||| Sbjct 828 TTATTAACTTCTGATAATTATGATGATAATGAAGATAGAGTTACTGGAGGAAGAAATGGT 887 Query 399442 TTTGGCGCTAAGCTTGCTAATATTTATTCTGTTGAATTTA 399481 ||||| || || ||| ||||||| | ||| ||||||| Sbjct 888 TTTGGAGCAAAACTTACTAATATATTCTCTAAAGAATTTA 927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740470544159856