Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20parvum_20[genbank_20GCA_5F002093615.1_202017-04- 14] 3,256 sequences; 9,040,186 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq2837 105 2e-17 >seq2837 Length=6166 Score = 105 bits (116), Expect = 2e-17 Identities = 152/213 (71%), Gaps = 1/213 (0%) Strand=Plus/Minus Query 206180 TTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTC 206238 |||| |||||| | |||||||| || ||||| |||||||| ||| ||| || || | Sbjct 6166 TTTGTCAAAACTTTAACAGGAAAGACCATCACATTGGAAGTTGAACCTTCCGATACTATT 6107 Query 206239 GAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTT 206298 || |||||| |||||| || || || || || ||| || || || | || Sbjct 6106 GAGAATGTAAAGGCAAAGATCCAGGATAAGGAGGGTATTCCTCCTGATCAACAGCGTCTG 6047 Query 206299 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 206358 ||||| || |||||||| ||||||||||| || ||| | | || ||||| ||||||| Sbjct 6046 ATCTTTGCTGGAAAGCAATTGGAAGATGGTAGAACTCTATCTGACTACAATATCCAGAAG 5987 Query 206359 GAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391 ||||| ||| | || | || || |||||| || Sbjct 5986 GAGTCCACTTTGCATTTAGTATTAAGACTTAGA 5954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181771497390776