Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20parvum_20[genbank_20GCA_5F002093615.1_202017-04- 14] 3,256 sequences; 9,040,186 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq2559 82.4 8e-11 >seq2559 Length=3356 Score = 82.4 bits (90), Expect = 8e-11 Identities = 151/215 (70%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 59919 GCAGTTAAACAAAAAGCAGAATGGGCCATGCAGTGGATGAGTCCTGGAGC-ATCATTTGC 59977 || || ||| | |||||||||||||| | | ||||||| | || |||| ||| ||||| Sbjct 2123 GCTGTAAAAAAGAAAGCAGAATGGGCAACTAAATGGATGAATTCT-GAGCGATCTTTTGC 2065 Query 59978 ACAACGTCTCA-TAGCTTTTGCATGC-GTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGT 60035 || | | | | | || || ||| || |||||||| | || ||||| || ||| Sbjct 2064 TGAAAGAATTATTGGATTCTG--TGCTGTTGAAGGAATTCTATTTTCTGGTAGCTTTTGT 2007 Query 60036 GCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTG 60095 || ||||| ||||| ||||| ||||| || ||||| || || | || || || || || Sbjct 2006 GCAATTTTTTGGCTTAAAAAACGTGGACTTATGCCTGGACTCACATTTTCTAATGAACTT 1947 Query 60096 ATTTCCCGGGACGAGGGCCTCCATCAGGAGTTTGC 60130 ||| || || || || |||||| || ||||| Sbjct 1946 ATTAGTCGTGATGAAGGTCTCCATGCTGATTTTGC 1912 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548502475040640