Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptosporidium_20sp._20chipmunk_20LX-
2015_20[genbank_20GCA_5F000831705.1_202015-02-03] 853 sequences; 9,509,783 total letters
Query= NC_003038.1
Length=212482
Score E
Sequences producing significant alignments: (Bits) Value
seq38 84.2 3e-11
>seq38
Length=21219
Score = 84.2 bits (92), Expect = 3e-11
Identities = 107/145 (74%), Gaps = 7/145 (5%)
Strand=Plus/Minus
Query 73941 CTAGTGCTA---AATAGACAACCTACTTTACATAAAGCATCA--ATGATGGCTCTTCGAG 73995
|||||||| || ||||| |||| ||||||||| || | || |||| || ||| |
Sbjct 3815 CTAGTGCTCTTTAACAGACAGCCTAGTTTACATAAG--ATGAGTATTATGGGTCATCGTG 3758
Query 73996 TTAAAATTATGGATGTAAAAACCTTTAAATTTAATCTTGCATGCACTAAACCATATAATG 74055
| |||||| || | || |||| | |||| ||| || ||| |||||||||||
Sbjct 3757 TAAAAATTTTGCCTTATTCCACATTTAGACTTAACCTTTCAGTAACTTCACCATATAATG 3698
Query 74056 CAGATTTTGATGGAGATGAAATGAA 74080
|||| ||||||||||||||||||||
Sbjct 3697 CAGACTTTGATGGAGATGAAATGAA 3673
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 679807151478960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |