Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptosporidium_20sp._20chipmunk_20LX-
2015_20[genbank_20GCA_5F000831705.1_202015-02-03] 853 sequences; 9,509,783 total letters
Query= NC_004062.1
Length=119217
Score E
Sequences producing significant alignments: (Bits) Value
seq445 109 4e-19
>seq445
Length=134117
Score = 109 bits (120), Expect = 4e-19
Identities = 158/223 (71%), Gaps = 0/223 (0%)
Strand=Plus/Minus
Query 42892 AGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGT 42951
||||| | ||||||||| | || |||||| || | |||||| || || || || |
Sbjct 79437 AGTCTCAGCACCAAATGTAAGGTAGACTCCTTCTGAATATTGTAGTCAGATAAAGTTCTG 79378
Query 42952 TCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCT 43011
| || |||||||| || || ||||| |||| ||||||||||| | || | || |||
Sbjct 79377 CCATCTTCCAATTGCTTTCCTGCAAAGATCAGACGCTGTTGATCAGGTGGAATGCCCTCT 79318
Query 43012 TTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTT 43071
|| || |||| | || || | ||| |||||| || ||| || || | ||
Sbjct 79317 TTGTCCTGGATCTTTGCCTTAACATTCTCAATGGTGTCGGAAGGCTCAACTTCCAATGTG 79258
Query 43072 ATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATTTTCT 43114
|| || ||||| |||| |||||| |||||||||||||| ||||
Sbjct 79257 ATGGTCTTTCCTGTTAAAGTTTTTACAAAAATTTGCATCTTCT 79215
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 381365635305474
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |