Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptosporidium_20sp._20chipmunk_20LX-
2015_20[genbank_20GCA_5F000831705.1_202015-02-03] 853 sequences; 9,509,783 total letters
Query= NC_004117.1
Length=158482
Score E
Sequences producing significant alignments: (Bits) Value
seq849 102 8e-17
>seq849
Length=33325
Score = 102 bits (112), Expect = 8e-17
Identities = 151/214 (71%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 142972 CAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTC 143031
||| || ||||| | || ||||||||||| || |||||||| | || || |||
Sbjct 19183 CAATACCAAATGTAAAGTGGATTCTTTTTGGATATTGTAATCAGAGAGAGTTCTTCCGTC 19242
Query 143032 TTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 143091
|| | |||||| || ||| |||||| |||||| || ||||| || || ||||| |||||
Sbjct 19243 CTCTAATTGTTTTCCTGCAAAGATCAAACGTTGTTGGTCGGGTGGAATTCCTTCCTTGTC 19302
Query 143092 GGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGT 143151
||| ||| ||| | | || | || || | || |||||||| | || | ||
Sbjct 19303 TTGAATCTTTGCTTTAACATTCTCGATTGTATCTGAAGGCTCTACTTCCAATGTTATAGT 19362
Query 143152 CTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185
||| || ||||| ||||| || || || ||||||
Sbjct 19363 CTTTCCCGTCAAAGTTTTAACAAAAATCTGCATA 19396
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 507008993958960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |