Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptosporidium_20sp._20chipmunk_20LX-
2015_20[genbank_20GCA_5F000831705.1_202015-02-03] 853 sequences; 9,509,783 total letters
Query= NC_013797.1
Length=108592
Score E
Sequences producing significant alignments: (Bits) Value
seq849 91.5 1e-13
>seq849
Length=33325
Score = 91.5 bits (100), Expect = 1e-13
Identities = 148/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 39507 CAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATC 39566
|| ||||||||| |||||| ||| ||||| ||||| ||||| | | | | | | ||
Sbjct 19639 CAATACCAAATGTAAAGTGGATTCCTTTTGGATATTGTAATCAGAGAGAGTTCTTCCGTC 19698
Query 39567 GTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTC 39626
|| ||||||||||| |||| || ||||| || ||||| | || | ||||| || ||
Sbjct 19699 CTCTAATTGTTTCCCCGCAAAGATCAAACGTTGTTGATCAGGTGGAATTCCTTCCTTATC 19758
Query 39627 GCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGT 39686
|| ||| ||||| || | | ||| |||| || || ||||| || || ||
Sbjct 19759 TTGAATCTTTGCTTTAACATTCTCAATTGTATCTGAAGGCTCTACTTCCAATGTGATAGT 19818
Query 39687 TTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
|| || || ||||| || || || ||||||||
Sbjct 19819 CTTTCCTGTCAAAGTCTTAACAAAAATCTGCAT 19851
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 347365988767349
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |