Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptosporidium_20sp._20chipmunk_20LX-
2015_20[genbank_20GCA_5F000831705.1_202015-02-03] 853 sequences; 9,509,783 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq445 98.7 1e-15
>seq445
Length=134117
Score = 98.7 bits (108), Expect = 1e-15
Identities = 162/231 (70%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
|| |||||||| || |||||||| | || || || |||||||| | || || ||| |
Sbjct 79217 AAGATGCAAATTTTTGTAAAAACTTTAACAGGAAAGACCATCACATTGGAAGTTGAGCCT 79276
Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360
|||||| | | | | |||| | ||| |||| ||||||||||| ||||| | ||
Sbjct 79277 TCCGACACCATTGAGAATGTTAAGGCAAAGATCCAGGACAAAGAGGGCATTCCACCTGAT 79336
Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAAC-GACTA 38419
|||||||| || || | || || || || |||| || | || | | | | | |||||
Sbjct 79337 CAACAGCGTCTGATCTTTGCAGGAAAGCAATTGGAAGATG-GCAGAACTTTATCTGACTA 79395
Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||| || || ||||| | || | |||||||||||| | | ||||| ||
Sbjct 79396 CAATATTCAGAAGGAGTCTACCTTACATTTGGTGCTGAGACTTAGAGGTGG 79446
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500167466907520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |