Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptosporidium_20sp._20chipmunk_20LX-
2015_20[genbank_20GCA_5F000831705.1_202015-02-03] 853 sequences; 9,509,783 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq113 215 2e-50
seq579 192 2e-43
seq849 152 2e-31
seq401 150 7e-31
seq335 136 2e-26
seq845 116 1e-20
seq35 109 2e-18
seq34 107 8e-18
seq13 105 3e-17
seq445 102 3e-16
>seq113
Length=180777
Score = 215 bits (238), Expect = 2e-50
Identities = 479/713 (67%), Gaps = 12/713 (2%)
Strand=Plus/Plus
Query 450913 AGCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAA 450972
||| ||||| |||||| | || ||||| | |||||||| ||||| | ||||| |
Sbjct 159932 AGCTATTGGTATTGATTTAGGTACCACATACTCATGTGTTGGTGTATGGAGAAATGATAC 159991
Query 450973 TGTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTAC 451032
||||| ||| | ||||||| ||||| || || || || |||| ||| |||||
Sbjct 159992 GGTAGATATTGTCCCAAATGATCAAGGTAACCGTACAACACCATCATATGTAGCATTTAC 160051
Query 451033 GGATTCAGAAAGACTTTTAGGGCAAGCTGCTAA--ATCAATGGTAAATTCAAATGCCAAA 451090
|| | || | || | || | || || || ||||| || | |||| | |
Sbjct 160052 AGAAACTGAGCGTCTCATTGGTGATGCAGCAAAGAATCAA--GTTGCTAGAAATCCAGAG 160109
Query 451091 AACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAA 451150
|| ||||| | ||||||||||||| | ||||| | | | |||||| | | ||||||
Sbjct 160110 AATACAGTTTTTGATGCTAAACGTCTTATTGGTAGGAAATTTGATGACCAGGCAGTACAA 160169
Query 451151 AAAGAGAAAAAATTCTTTTCTTATGATGTAGTAAA---TCAAAAAGGAAAGCCCTATATT 451207
| || | | || | | | | ||||| | || ||| | ||||| |||
Sbjct 160170 AGTGATATGACTCACTGGCCATTTAAAGTAGTTAGAGGTCCAAAGGACAAGCCAATCATT 160229
Query 451208 CAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTT 451267
|||| ||| ||||| | || || | | || || ||||| ||||||||
Sbjct 160230 AGTGTAAGCTATTTGGGTGAGAAGAAGGAATTCCATGCCGAGGAGATTTCTGCTATGGTT 160289
Query 451268 CTTACTAAA-ATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGT 451326
|||| ||| ||||| |||| | ||| ||| | ||| ||| ||| |||| ||
Sbjct 160290 -TTACAAAAGATGAAGGAAATCTCTGAAGCATACTTGGGTCGCCCAATTAAGAATGCTGT 160348
Query 451327 AATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACA 451386
| ||||||| || ||||| |||||||| ||||||| |||||||| || ||||| ||
Sbjct 160349 AGTTACTGTACCAGCTTACTTCAATGACTCACAACGTCAAGCAACAAAGGATGCTGGTGC 160408
Query 451387 TATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATA 451446
||||||||||| ||||| | |||| |||||||| || || ||||||||| | || ||
Sbjct 160409 AATTGCTGGTTTGAATGTAATGAGAATCATTAATGAGCCAACTGCAGCTGCTATTGCTTA 160468
Query 451447 TGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGG 451506
|| || | || ||||| ||| | || | |||| |||| | || ||||| |||||
Sbjct 160469 CGGTCTTGATAA---AAAAGGAACCGGTGAGAGAAATGTTTTGATCTTCGATTTAGGTGG 160525
Query 451507 AGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAAC 451566
|| ||| |||| || || | | ||||| ||||| | |||||||| ||||| ||
Sbjct 160526 TGGTACTTTTGATGTATCATTATTAACTATTGAGGATGGTATTTTTGAAGTTAAGGCTAC 160585
Query 451567 CAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAATGCAATTGTGGAAT 451619
|||||| ||||| | || |||||||| ||||||| | |||| ||||
Sbjct 160586 TGCTGGTGACACTCACTTGGGTGGTGAAGACTTTGATAACAGACTTGTAGAAT 160638
>seq579
Length=144132
Score = 192 bits (212), Expect = 2e-43
Identities = 460/692 (66%), Gaps = 19/692 (3%)
Strand=Plus/Minus
Query 450917 ATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAATGTA 450976
||||| || ||| | || || || | ||||||||| ||| | ||| ||||||| | |||
Sbjct 66626 ATTGGTATCGATTTAGGTACTACTTATTCATGTGTTGGTATCTACAAAAATGGTAGAGTA 66567
Query 450977 GAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTACGGAT 451036
||||| || ||||||| || || || | ||| || || | ||| ||||| |||
Sbjct 66566 GAAATCATTCCAAATGAACAGGGCAACCGTATTACACCATCTTATGTATCATTTACTGAT 66507
Query 451037 TCAGAAAGACTTTTAGGGCAAGCTGCTAA-ATCAATGGTAAATTCAAATGCCAAAAACAC 451095
|| ||| | | || | | ||||| | | | | || | |||| | | | ||
Sbjct 66506 GATGAGAGATTGATCGGTGAGTCAGCTAAGAACCAAGCTACAATCAA-TCCAGTTCAGAC 66448
Query 451096 AGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAAAAAGA 451155
| | | |||| ||| | | || |||||| | | | ||||| | || ||||| ||
Sbjct 66447 ATTGTTCGATGTGAAAAGACTTATCGGCCGTCGTTTTAAGGATGACTCCGTCCAAAAGGA 66388
Query 451156 GAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGA----AAGCCCTATATTCAAG 451211
|| | || || | ||||| | || ||| ||||| ||||| || || || |
Sbjct 66387 TAAGACTTTGTTACCATATGAGATTGT----CAACAAGGACAGCAAGCCTTACATACAGG 66332
Query 451212 TAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTA 451271
| | | || ||||| | ||| || ||||| ||||| |||| |||||||| |
Sbjct 66331 TTACTGTCAAGGGTGAGAAGAAACAATTGGCTCCAGAAGAGGTTTCTGCTATGGTTTTAG 66272
Query 451272 CTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTA 451331
||||||||| || | || ||| ||| | || ||| | | || |||||||
Sbjct 66271 TTAAAATGAAGGAGATTGCTGAAGCTTATCTCGGAAAGGAAGTCAAGCACGCTGTAATTA 66212
Query 451332 CTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTG 451391
||||||| ||||| || |||||||| || || ||||| ||||| ||||| || |||||
Sbjct 66211 CTGTTCCAGCTTACTTTAATGATGCTCAGCGTCAAGCCACTAAGGATGCTGGTGCTATTG 66152
Query 451392 CTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGAC 451451
||||||| ||||| | || || |||||||| || ||||| || ||| | || | |||
Sbjct 66151 CTGGTTTGAATGTAATCCGTATCATTAATGAGCCAACAGCGGCAGCTATTGCTTTTGGTT 66092
Query 451452 TAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAA 451511
| | | ||||| | || || | ||||| |||| ||||| ||||| || |
Sbjct 66091 TGG-------ATAAGAA--GGCTGAGAAGAGCATTTTGGTATACGATTTGGGTGGTGGTA 66041
Query 451512 CTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATG 451571
|| |||| ||| | | | || || |||| || |||||||| || || | ||
Sbjct 66040 CTTTTGATGTTTCCCTCTTGACCATCGACAATGGCGTTTTTGAAGTCGTTGCCACAAGTG 65981
Query 451572 GTGATACTCATCTAGGAGGTGAAGATATTGAT 451603
||||||| ||| |||||||||||||| | |||
Sbjct 65980 GTGATACCCATTTAGGAGGTGAAGATTTCGAT 65949
Score = 132 bits (146), Expect = 2e-25
Identities = 325/487 (67%), Gaps = 13/487 (3%)
Strand=Plus/Minus
Query 451991 AATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTTCA 452050
|| ||||| ||||| ||||| ||||||||||| || ||||| | ||| || |||||
Sbjct 65561 AACCCTGACGAAGCCGTTGCTTATGGTGCTGCTGTACAAGCTGGTATCTTAGCAGGT--- 65505
Query 452051 GATGATGAAAAATTAG-GAGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGT 452109
|| | || ||| || |||| | | | ||||| |||||| || || | || |
Sbjct 65504 GAGGGTGG-----TAGCGACTTATTATTGTTG--GATGTTACACCTTTAACTTTGGGTAT 65452
Query 452110 TGAAACAGCTGGTGGAATGATGACTAATTTAATTAAACGAGGAACTTCTATTCCTTGTAA 452169
||| || | ||||||| | ||||| || | ||| || ||| | |||| ||
Sbjct 65451 TGAGACTGTTGGTGGAGTTATGACCAAGCTCATTGGTAGAAACACTGTTGTTCCAACAAA 65392
Query 452170 AAAGAGTCAAACATTTAGTACAG-CAAGTGATAACCAACCAGGTGTAACTATTCAAGTGT 452228
||||| ||| |||||||| | || ||||| || |||| ||| ||| ||||| |
Sbjct 65391 GAAGAGCCAAGTTTTTAGTACTTACCAG-GATAATCAGCCAGCCGTACTTATCCAAGTTT 65333
Query 452229 TTGAAGGAGAACGTGCAATGACACGAGATAATAATAAACTAGGAGAATTTACTCTTTCAA 452288
|||||| || ||| ||||||| || || || || ||| | || |||||
Sbjct 65332 ATGAAGGTGAGCGTCCAATGACCAAGGACAACAACCTCCTCGGAAAGTTCGAGCTTTCTG 65273
Query 452289 ACATTCCTCCTATGCCAAGGGGAACTCCTCAAATTGAAATTACCTATGATGTTGATGCAA 452348
|| || ||| ||||| || |||||||||||| |||| | ||| ||||| |
Sbjct 65272 GAATCCCCCCTGCTCCAAGAGGTGTTCCTCAAATTGAGGTTACTTTTGAAATTGATACTG 65213
Query 452349 ATGGTATTCTTAATGTGAGTGCAGTTGAAAAATCATCTGGAAAATCAGAAAAAATTACAA 452408
|||||||| | | || |||||| || || |||| ||||| || |||||||| |
Sbjct 65212 ATGGTATTTTACAAGTCAGTGCAAAGGACAAGGGTACTGGTAAATCTGAGAAAATTACCA 65153
Query 452409 TTACTAATGATAAAAACCGTTTATCTAAAGAAGATATTGAAAAAATGGTAGATGAAGCAG 452468
| || |||||||| | | | || | |||||||||||| ||| | | || ||||
Sbjct 65152 TCACAAATGATAAGGGCAGACTTTCACAGGAAGATATTGAACGTATGATTAAGGAGGCAG 65093
Query 452469 AAAAATT 452475
| ||||
Sbjct 65092 AGCAATT 65086
>seq849
Length=33325
Score = 152 bits (168), Expect = 2e-31
Identities = 168/224 (75%), Gaps = 0/224 (0%)
Strand=Plus/Minus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | ||||| |||||||| |||| || || ||||| || | || || || | ||
Sbjct 19623 ATGCAGATTTTTGTTAAAACTTTGACAGGAAAGACTATCACATTGGAAGTAGAGCCTTCA 19564
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|||| ||||| | ||||| ||| |||||||| |||||||||||||| || || |||
Sbjct 19563 GATACAATTGAGAATGTTAAAGCAAAGATTCAAGACAAGGAAGGAATTCCACCCGACCAA 19504
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|||||||| || ||| |||| || ||||| || |||||||||||| | | ||||| |||
Sbjct 19503 CAACGTTTGATCTTCGCAGGAAAGCAACTAGAGGATGGAAGAACTCTATCTGATTACAAT 19444
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273
|| | ||||| | || | |||||||| || || || |||||
Sbjct 19443 ATCCAAAAGGAATCCACTTTACACTTAGTCTTGAGGCTCAGAGG 19400
Score = 152 bits (168), Expect = 2e-31
Identities = 168/224 (75%), Gaps = 0/224 (0%)
Strand=Plus/Minus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | ||||| ||||| || |||| || || ||||| || | || || || | ||
Sbjct 19851 ATGCAGATTTTTGTTAAGACTTTGACAGGAAAGACTATCACATTGGAAGTAGAGCCTTCA 19792
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|||| ||||| | ||||| ||| ||||||||||||||||||||||| |||||||||
Sbjct 19791 GATACAATTGAGAATGTTAAAGCAAAGATTCAAGATAAGGAAGGAATTCCACCTGATCAA 19732
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|||||||| || || | ||||||||| | || || ||||||||| | | ||||| |||
Sbjct 19731 CAACGTTTGATCTTTGCGGGGAAACAATTAGAGGACGGAAGAACTCTCTCTGATTACAAT 19672
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273
|| | ||||| | || | || || ||||| ||||| |||||
Sbjct 19671 ATCCAAAAGGAATCCACTTTACATTTGGTATTGAGACTCAGAGG 19628
Score = 134 bits (148), Expect = 5e-26
Identities = 164/224 (73%), Gaps = 0/224 (0%)
Strand=Plus/Minus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | ||||| |||||||| |||| || || ||||| || | || || || | ||
Sbjct 19395 ATGCAGATTTTTGTTAAAACTTTGACGGGAAAGACTATAACATTGGAAGTAGAGCCTTCA 19336
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|||| || || | ||||| ||| |||||||| |||||||||||||| || || |||
Sbjct 19335 GATACAATCGAGAATGTTAAAGCAAAGATTCAAGACAAGGAAGGAATTCCACCCGACCAA 19276
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|||||||| || || |||| |||||| | || || ||||||||| | | ||||| |||
Sbjct 19275 CAACGTTTGATCTTTGCAGGAAAACAATTAGAGGACGGAAGAACTCTCTCTGATTACAAT 19216
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273
|| | || || | || | || || ||||| ||||| |||||
Sbjct 19215 ATCCAAAAAGAATCCACTTTACATTTGGTATTGAGACTTAGAGG 19172
>seq401
Length=300945
Score = 150 bits (166), Expect = 7e-31
Identities = 202/281 (72%), Gaps = 9/281 (3%)
Strand=Plus/Plus
Query 451322 GCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCA 451381
|| ||||||||||| || || ||||| |||||| | ||||| ||||||||||| || ||
Sbjct 205453 GCTGTAATTACTGTGCCAGCCTATTTTAATGATTCTCAACGTCAAGCAACTAAGGACGCG 205512
Query 451382 GGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTA 451441
|| ||| || ||||||||||| |||| ||||| ||||| |||||||| ||| |
Sbjct 205513 GGCTCTATAGCAGGTTTAAATGTGACAAGAATCATTAACGAACCAACAGCAGCAGCTTTG 205572
Query 451442 GCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTT 451501
||||| ||| | ||| | || | || | |||| ||| ||| | ||||||
Sbjct 205573 GCATACGGAAT-GGAGA--------AAGCCGATGGTAAAACAATTGCAGTTTATGATTTG 205623
Query 451502 GGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAG 451561
|| ||||| ||| ||||| |||| | | || | || |||||||| |||||
Sbjct 205624 GGAGGAGGCACTTTTGATATTTCTATTTTAGAGATCCTTGGGGGAGTATTTGAGGTAAAA 205683
Query 451562 GCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGA 451602
||||| ||||| ||||| ||||||||||||||| ||||
Sbjct 205684 GCAACAAATGGAAATACTTCCCTAGGAGGTGAAGATTTTGA 205724
Score = 89.7 bits (98), Expect = 2e-12
Identities = 279/429 (65%), Gaps = 20/429 (5%)
Strand=Plus/Plus
Query 451967 GGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTT 452026
|||| | ||| || || | || || |||||||| || |||||| || |||||| |
Sbjct 206098 GGAAGAGAACCATCAAAAGGAGTTAACCCTGATGAGGCCGTTGCAATGGGAGCTGCAATA 206157
Query 452027 CAAGCAGCTATTCTAACAGGTTCAGATGATGAAAAATTAGGAGATATTCTGTTAGTAGAT 452086
|| || | | || | | ||| | |||| | | ||| || ||||| | |||
Sbjct 206158 CAGGCTGGTGTTTTGAAAGG-----------AGAAATCAAG-GATCTTTTGTTACTTGAT 206205
Query 452087 GTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATGATGACTAATTTAATTAAA 452146
|| || ||| ||||| | || | ||||| |||||| | | ||| |||||||
Sbjct 206206 GTTACTCCTTTATCTTTAGGTATCGAAACTTTGGGTGGAGTTTTTACTCGACTAATTAAT 206265
Query 452147 CGAGGAACTTCTATTCCTTGTAAAAAGAGTCAAACATTTAGTACAGCAAGTGATAACCAA 452206
|| || | || || ||| ||||| ||| ||| || ||| |||||||||
Sbjct 206266 AGAAACACCACGATCCCCACTAAGAAGAGCCAAGTATTCTCCACTGCAGCGGATAACCAA 206325
Query 452207 CC--AGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCAATGACACGAGATAATAATA 452264
| |||| | ||| | || || | |||||| | | | | | ||||||||
Sbjct 206326 ACTCAGGTTGGA--ATTAAGGTTTTCCAGGGAGAAAGAGAATTTGCTGCTGATAATAAGT 206383
Query 452265 AACTAGGAGAATTT--ACTCTTTCAAACATTCCTCCTATGCCAAGGGGAACTCCTCAAAT 452322
||| ||| ||||| | | | || ||||||| || |||||| |||||||||
Sbjct 206384 TACTTGGACAATTTGAAATGATGGGAA--TTCCTCCAGCCCCTAGGGGAGTTCCTCAAAT 206441
Query 452323 TGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTGAGTGCAGTTGAAAAATC 452382
|||| | || | |||| ||||||| ||||| ||| | ||||| |||| |||| || ||
Sbjct 206442 TGAAGTAACTTTTGATATTGATGCGAATGGAATTATGAATGTTGGTGCTATTGATAAGTC 206501
Query 452383 ATCTGGAAA 452391
| |||||||
Sbjct 206502 AACTGGAAA 206510
>seq335
Length=109725
Score = 136 bits (150), Expect = 2e-26
Identities = 287/423 (68%), Gaps = 15/423 (4%)
Strand=Plus/Plus
Query 364565 TATTCCATCTTTAGTTGATGGATTTAAACCTTCTCAAAGAAAAATTTTTTATGGAGCAAA 364624
||||||| |||| | |||||||| |||||| ||||||||| | ||| || | ||
Sbjct 4085 TATTCCAAATTTATTGGATGGATTAAAACCTGGCCAAAGAAAAGTACTTTTTGCAACA-- 4142
Query 364625 TTTAAGAGGATTAGAAAAAGATCAAGTAAAAGTAGCTCAATTAGCAGGTTTTGTATCTGA 364684
||||| | || || | || || | ||||| || |||||||| |||| ||| ||||
Sbjct 4143 TTTAAAAAGAAACTTAATA-ATGAACTTAAAGTTGCACAATTAGCTGGTTATGTTGCTGA 4201
Query 364685 CCGGGTAGCTTATCATCACGGTGAGGCAAGTTTAATGGGAGCAATAATTGGAA---TGGC 364741
| ||||| || ||||| || || | | || | | |||| || ||||
Sbjct 4202 ACATAGCGCTTACCACCACGGAGAATCA---TCATTGCAAAGTACTATTGTAAACATGGC 4258
Query 364742 ACAAAATTTTGTTGGAAGTAATAATGTAAATTTACTAGAACCAAAAGGACAATTTGGAAG 364801
|||||||||||||||||||| ||| | |||||| ||||||| || |||||||| ||
Sbjct 4259 TCAAAATTTTGTTGGAAGTAACAATCTTAATTTATTAGAACCTTGTGGTCAATTTGGTAG 4318
Query 364802 TCGAGTAATGGGAGGTAAAGATTCTGCCAGC---CCACGTTATATTTGGACCAAACTTGA 364858
| || ||| || ||||| ||| ||| | |||||||| | || || ||
Sbjct 4319 TAGAAAGGAGGGCGGAAAAGA---TGCAAGCGCTGCTCGTTATATATTTACTAAGCTATC 4375
Query 364859 AAAAGTGGCAGGATTAATATTTAGAAAAGAAGATAATCCAATTTTAAATTATATTAATGA 364918
|||| | | ||| ||||| | ||| ||| |||| | |||| ||| | ||||
Sbjct 4376 AAAATGGACTAGATATATATTCCCAGAAGCTGATGATCCTTTATTAACTTACTTATATGA 4435
Query 364919 TGATGGATTAATGGTTGAACCTGAATTTTATCTTCCTATTATTCCTATGATTTTAGTAAA 364978
||||||| | |||| ||| || ||| |||| || ||||| |||||||| || ||
Sbjct 4436 TGATGGACAACAAATTGAGCCTTTATATTACGTTCCAATAATTCCAATGATTTTGGTGAA 4495
Query 364979 TGG 364981
|||
Sbjct 4496 TGG 4498
Score = 123 bits (136), Expect = 1e-22
Identities = 402/599 (67%), Gaps = 44/599 (7%)
Strand=Plus/Plus
Query 363743 AGGAATTCCTAAACTAGAAGATGCTAATAAAGCAGGAACAAAAGATGCTCATAAATGTGG 363802
|||||| || ||||| |||||||| || | || || | || || | |||||
Sbjct 3275 AGGAATCCCAAAACTTGAAGATGCAAACGAGGCTGGTGGACCCCATTCTAAAAAATGCAC 3334
Query 363803 ATTA-TATTTAGCAGAGGGAGATTCTGCTCT---TTCTATGATTCTGTCAGGGTTATCAA 363858
|| || ||| |||| |||||||||||| |||| || | || |||| | || |
Sbjct 3335 TCTAATACTTA-CAGAAGGAGATTCTGCTAAAACTTCT-TGCCT-TG-CAGGACTCTCTA 3390
Query 363859 GTAAAGATAGAAATTTTTATGGTGCCTTTCCGTTAAAAGGAAAATTATTAAATGTAAGAG 363918
| || ||| | | || ||| | ||||| ||| |||||| | |||||||| ||||
Sbjct 3391 TTGTAGGCAGAGACTATTTTGGAGTATTTCCATTACGTGGAAAACTTTTAAATGTTAGAG 3450
Query 363919 AAGCATCAGTTAAACAAATTATGGGAAATGATGAGATATCAAACCTTaaaaaaaTTTTAG 363978
|||| ||| |||||||| || || || | || ||| ||| || ||||| || |
Sbjct 3451 AAGCTTCATTTAAACAACAAATTGGTAACGTAGAAATACAAAATATTCTTAAAATATTGG 3510
Query 363979 GATTACGTAATGAATTTAAATATGAAATGGATGAAGAATTTAATACTTTAAGATATGGAA 364038
||||| ||| || |||||||| | ||| | | |||| ||||||||||||
Sbjct 3511 GATTAGGTATTGGCCAAAAATATGATA---ATGGACCAGTTAAC---TTAAGATATGGAT 3564
Query 364039 AAGTAATAATTTTATG--TGATTCAGATGTAGATGGAAGTCATATTAAGGGACTAATTTT 364096
|||| || ||| |||| |||| ||||| ||||||||||| ||||||||| |
Sbjct 3565 CTTTAAT--GTTAATGACTGATCAAGATCATGATGGTAGTCATATTAAAGGACTAATTAT 3622
Query 364097 AAATATGTTTCA-TAGTATGTGGCCTAATCT-TTTAAAAAGAGAAGGTT-TTATTACAAC 364153
|| | | || || ||| ||||| | | | || | ||| | || ||| ||||
Sbjct 3623 TAACTTAATACATTATTAT-TGGCCAAGTTTAATTCATTTTAGAGGATTCTTAAAACAA- 3680
Query 364154 TATGAACACTCCAATTGTTAAAGCAACAAAAGGA---AAAGAAATATTAAAATTTTATAA 364210
| || ||||||||||||||||||| ||||||| || ||||| | ||||| ||
Sbjct 3681 TTTG-TTACTCCAATTGTTAAAGCAAAAAAAGGATCCAATGAAATTT---CATTTTTTAC 3736
Query 364211 TTTAACTGATTATGATAATTGGAGAAATGATAAT------AATACAAAAGGATATTATAT 364264
||| ||| || || | |||||||| ||||| || ||| |||| | ||
Sbjct 3737 CTTATATGAATACGAGCAATGGAGAAAGAATAATTCATCAAACTTAAATGGAT-GGAGAT 3795
Query 364265 T-AAATATTACAAAGGATTAGGAACATCT---GATTCTAAAGAAGCTAAAGAATATTTT 364319
| || ||||| ||||| ||||| |||||| || ||| ||| |||||| ||||||
Sbjct 3796 TCAAGTATTATAAAGGTTTAGGCACATCTACAGA-TCT--TGAATTTAAAGAGTATTTT 3851
>seq845
Length=51946
Score = 116 bits (128), Expect = 1e-20
Identities = 126/166 (76%), Gaps = 1/166 (1%)
Strand=Plus/Plus
Query 248780 TGAAAGCTAGAATTTTCATTGGTCCTATGTTTTATTTGAGACTTAAACATATGGTACTTG 248839
||||| ||| | |||| |||| ||||| | |||| || | | ||||||||||| ||||
Sbjct 8433 TGAAACCTATATTTTTG-TTGGACCTATTTATTATCAGAAATTGAAACATATGGTTCTTG 8491
Query 248840 ATAAAGTTCATTCCAGAAGTATGGGTCCTAGACAAGCTATTACTAGACAACCCATGGAAG 248899
||||| | ||| | ||| | | |||||||||||| | | || |||||||||| ||||
Sbjct 8492 ATAAAATGCATGCAAGAGGAAGAGGTCCTAGACAAATTCTCACCAGACAACCCACTGAAG 8551
Query 248900 GACGTTCTAAAGATGGAGGTCTTAAAATTGGAGAGATGGAAAAAGA 248945
|| | ||||| |||||||| || |||| |||||||||| |||
Sbjct 8552 GAAGATCTAAGGATGGAGGACTACGTCTTGGTGAGATGGAAAGAGA 8597
>seq35
Length=319104
Score = 109 bits (120), Expect = 2e-18
Identities = 172/239 (72%), Gaps = 12/239 (5%)
Strand=Plus/Minus
Query 437616 TGTCGTATAATTGGCTTAACACTTGAAACACGACCTGATTTTATTACTCCGAAAGAAAT- 437674
||| | ||||||||||||||| | |||||| |||| |||| |||||||| | |||||
Sbjct 168119 TGTAGAATAATTGGCTTAACATTAGAAACAAGACCAGATTATATTACTCTAGATGAAATA 168060
Query 437675 -TACAATTCTTCGAAGTTATGGATGTACCAGAGTACAACTTGGAATTCAACATATCAATG 437733
| || | || ||| ||| ||||| || |||||||||||||| || || || ||
Sbjct 168059 CTCCAGCTAAGGGA-GTT-TGGGTGTACTAGGGTACAACTTGGAATCCAGCA---CACTG 168005
Query 437734 ATGATA---TTTTGAATTACATTAATCGAGGGTGTAA-ACACAGTAAGTCAGTGAGAGCA 437789
|| || | || || ||||||| |||| ||| | | | || || || | |
Sbjct 168004 ATTATTGGGTCTTAAAGCTCATTAATAGAGGTTGTTATATGCGCCAAATC-GTAAAGTCG 167946
Query 437790 ATCAAACTACTTAAAAATGCTGGTTTTAAGGTGGATATTCATTTGATGCCAGATTTGCC 437848
|| | |||||||||| || |||| | ||| || |||||||| |||||||||||||| ||
Sbjct 167945 ATTAGACTACTTAAAGATACTGGATATAAAGTAGATATTCACTTGATGCCAGATTTACC 167887
>seq34
Length=9231
Score = 107 bits (118), Expect = 8e-18
Identities = 141/195 (72%), Gaps = 3/195 (2%)
Strand=Plus/Plus
Query 96115 TACTTTACTAATGTTTAATGCTGGGCTCCAGTTATTTTTTAAAATATCTAAACAAATTGC 96174
|||| | || | | | || || || |||||| || |||||||||||| | ||||| ||
Sbjct 7564 TACTGTTCTGAGGGTCAAAGCAGGACTCCAGGCATCTTTTAAAATATCCAGGCAAATAGC 7623
Query 96175 ACCTGTAGTACTA---ATATTTGGATGATAAATAGGAGTTTTAAATATAATTTTAGGAGG 96231
||||| |||| ||||||||||| |||| || | ||| ||| ||| |||||
Sbjct 7624 TCCTGTTTGACTAGAAATATTTGGATGCCAAATTCTTGTGATGAATTTAACTTTTGGAGG 7683
Query 96232 CTTATATGGATAGTCTTCAGGAAAAGTAATTTCTAATTGGAATACTCCACCCTCATAGGG 96291
| ||||||||| |||| |||| | |||| || | |||||||| || || ||||| ||
Sbjct 7684 TTCATATGGATATTCTTTTGGAACAATAATATCAAGTTGGAATATCCCTCCTTCATATGG 7743
Query 96292 TGTTCCTGAAGGGCC 96306
||| || ||||||
Sbjct 7744 TGTCCCCATAGGGCC 7758
>seq13
Length=173107
Score = 105 bits (116), Expect = 3e-17
Identities = 128/172 (74%), Gaps = 2/172 (1%)
Strand=Plus/Minus
Query 412289 TTCCAAAACGACCACTTCTACCAATTCTATGTATAAAAGTTTCATGATTTTTAGGTAAAT 412348
||||||| || |||||||| ||||||||||| ||| | ||| | ||| |||||| |
Sbjct 157435 TTCCAAATCGGCCACTTCTTCCAATTCTATGAATATATAGTTCTTTATTAGTAGGTAGGT 157376
Query 412349 CATAATTTATAACTAATTTAACCTCAGGAATATCTATCCCCCGTGCTAATAAATCAGTTG 412408
||||||| | |||||| || || | | | ||| || || | | | ||||||| ||||
Sbjct 157375 CATAATTGACAACTAAGTTGACTTGTTGTACATCAATACCTCTTCCCCATAAATCTGTTG 157316
Query 412409 TTAATAAAATTCGTGTTTTTCCCTCTCTAAATTCATCTACAATTTTACTTCT 412460
| | ||||| || ||||| || |||||||| || ||| |||| || |||||
Sbjct 157315 TAATTAAAACCCGAGTTTTCCCATCTCTAAACTC-TCT-CAATATTTCTTCT 157266
Score = 100 bits (110), Expect = 1e-15
Identities = 108/143 (76%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 163322 AACAAAAAGTTGGAAATTTTAAAATAGAACCTCCTGGTATATTTTTAGGTAGAGGTTCCC 163381
|| |||||||||||||||| | ||| || || ||||| | ||| ||||||||| |
Sbjct 28129 AAGAAAAAGTTGGAAATTTCAGAATTGAGCCACCTGGGCTGTTTAAAGGTAGAGGAGAGC 28188
Query 163382 ATCCAAAAATAGGAAAATGGAAAAGAAGAATATATCCAGAAGATGTTATTTTAAATTTAG 163441
||||||| ||| | | ||||||| |||||| || |||||||| | ||||||| | |
Sbjct 28189 ATCCAAAGTCAGGCATGTTGAAAAGACGAATATTCCCTGAAGATGTAACTTTAAATATTG 28248
Query 163442 ATAAAAATGCACCTATTCCAAAG 163464
|| |||||||| ||||||||
Sbjct 28249 CGGAAGATGCACCTGTTCCAAAG 28271
>seq445
Length=134117
Score = 102 bits (112), Expect = 3e-16
Identities = 157/224 (70%), Gaps = 0/224 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | ||||| || ||||| | || || || || || || | || ||||| | ||
Sbjct 79220 ATGCAAATTTTTGTAAAAACTTTAACAGGAAAGACCATCACATTGGAAGTTGAGCCTTCC 79279
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|| | |||||| | |||| ||| || || || || || || ||||| |||||||||
Sbjct 79280 GACACCATTGAGAATGTTAAGGCAAAGATCCAGGACAAAGAGGGCATTCCACCTGATCAA 79339
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| ||| | || || |||| || ||| | |||||||| |||||||| | || || |||
Sbjct 79340 CAGCGTCTGATCTTTGCAGGAAAGCAATTGGAAGATGGCAGAACTTTATCTGACTACAAT 79399
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273
||| | ||||| | || | || || || | ||||| |||||
Sbjct 79400 ATTCAGAAGGAGTCTACCTTACATTTGGTGCTGAGACTTAGAGG 79443
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975696807250124
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |