Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20sp._20chipmunk_20LX- 2015_20[genbank_20GCA_5F000831705.1_202015-02-03] 853 sequences; 9,509,783 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq113 538 3e-147 seq579 174 1e-37 seq335 109 4e-18 seq401 105 5e-17 >seq113 Length=180777 Score = 538 bits (596), Expect = 3e-147 Identities = 1067/1566 (68%), Gaps = 24/1566 (2%) Strand=Plus/Minus Query 517162 AGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTCCGCGATTATTAGTAAT 517221 ||| || ||| ||| | ||||| | ||| | || ||||| || || |||||||| Sbjct 161489 AGCATCATTAACCATGCGTTCAATATCATCCTTTGATAATCTACCCTTATCGTTAGTAAT 161430 Query 517222 AGTAATATTCTTGGATTTGTTTGTTGAT-TTATCAGCGGCAGTCACATTAAGAATACCAT 517280 ||||| || || || | | || | |||||| | |||| ||||| | ||||||| Sbjct 161429 GGTAATCTTGCTGCTCTT-TCCGGTGCTCTTATCAACAGCAGAGACATTCAAGATACCAT 161371 Query 517281 TGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCC 517340 ||||||| | |||||| ||||| ||||| || || || || ||| | || |||||||| | Sbjct 161370 TGGCATCAATATCAAAGGTGACCTCAATCTGTGGCACACCCCTCGGTGCTGGTGGGATAC 161311 Query 517341 CTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGA 517400 | || | || ||| |||| || | || || ||||| | || |||||||| Sbjct 161310 CATCAAGATGGAATTTTCCGAGGAGGTGGTTGTCCTTAGTCATAGCTCTCTCACCCTCAT 161251 Query 517401 AAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTC-TGGATTTT 517459 | | |||||| || || |||| ||||| | |||||| || || ||| || || | Sbjct 161250 AGACTTGGATTAAGACACCACTTTGGTTATCAGCATAAGTAGTGAAGACTTGTGTCTTCT 161191 Query 517460 TTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGCTGTTTCT 517519 || | ||| | ||||| || | ||||||| |||||||||| |||||| || |||||| Sbjct 161190 TTGCTGGGA-TAGTTGTATTACGCTCAATAAGCTTGGTCATAACACCACCAGCAGTTTCT 161132 Query 517520 AAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTT 517579 ||||| || || | |||| ||||| | | | | || |||| || | | Sbjct 161131 AAACCGAGTGATAATGGAGCAACATCCAACAACAAGAGATCCTGAACGG---CAGAGGAT 161075 Query 517580 TGACCAACA---AGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGA 517636 || || || | || || ||||||| |||||||||||| |||||||||||||| ||| Sbjct 161074 TGTTCACCATTTAAGATTGCAGCTTGAACAGCAGCACCATAAGCAACAGCTTCATCTGGA 161015 Query 517637 TTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATT-TGAAAGAAGTTGTCTTACCTT 517695 |||| | || | | | ||||| ||||| || | |||| || | || | ||| Sbjct 161014 TTAATTGCTTTGCATGGCTCCTTACCGTTGAAGAATTCCTGAATCAAA--GCCTGAACTT 160957 Query 517696 A-GGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTT 517754 |||||||| | || || |||||||| |||| ||||| || | || |||| Sbjct 160956 TTGGAATACGGGTAGAGCCACCAACTAAGACAACATCATGTACAGATCTCTTGTCCATAC 160897 Query 517755 TTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCTGAACAAA 517814 | |||| | |||||| ||||| || | | | || | || | || | ||| | Sbjct 160896 CAGCATCCTTGAGAACTTTCTCAACTGGAGCTAAAGTTGCACGGAAATAATCAGCACAGA 160837 Query 517815 GTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAACAAAGAAT 517874 |||| || ||| |||||||| ||| | || ||||||||| |||||| | | |||| Sbjct 160836 GTTCCTCAAATCTAGCTCTACTAATGGCAACTGAATAATCAATACCTTCGTAAAGCGAAT 160777 Query 517875 CAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTG 517934 | | |||||| |||| || || ||||| |||| | | || ||||| || ||| | Sbjct 160776 CTAATTCAATAGTAGCCTGGGTGGAAGATGATAAAGTTCTCTTTGCACGCTCGCATTGAG 160717 Query 517935 TCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAAATCTGT---TTTATATTTTCTCT 517991 | |||| ||||| ||| ||| | || | | | || || | | ||| ||||||| Sbjct 160716 TTCTTAATCTTCTTAAAGCTCTAGCATTTGTAGTTAAGTCCATACCTCTATTCTTTCTCT 160657 Query 517992 TGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAG 518051 | ||||||| ||||| || |||||| | |||||||| |||||||| ||||| | || Sbjct 160656 TAAAATCTTGTACACAGAATTCTACAAGTCTGTTATCAAAGTCTTCACCACCCAAGTGAG 160597 Query 518052 TATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACAT 518111 | | || | ||||| | |||| |||| ||||| |||| || || | | ||||| Sbjct 160596 TGTCACCAGCAGTAGCCTTAACTTCAAAAATACCATCCTCAATAGTTAATAATGATACAT 160537 Query 518112 CATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTAT 518171 || || |||||||| | ||| || || | ||||| | || | | ||||||| Sbjct 160536 CAAAAGTACCACCACCTAAATCGAAGATCAAAACATTTCTCTCACCGGTTCCTTTTTTAT 160477 Query 518172 CAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGAC 518231 ||||||| || |||| |||||| |||||||| |||||||| ||||||| ||||| | || Sbjct 160476 CAAGACCGTAAGCAATAGCAGCTGCAGTTGGCTCATTAATGATTCTCATTACATTCAAAC 160417 Query 518232 CAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAA 518291 |||||||| || ||||| || || ||||| | |||||| || || || || || || | Sbjct 160416 CAGCAATTGCACCAGCATCCTTTGTTGCTTGACGTTGTGAGTCATTGAAGTAAGCTGGTA 160357 Query 518292 CAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTT 518351 |||||| || |||| | | | ||| | || || | ||| ||||| | Sbjct 160356 CAGTAACTACAGCATTCTTAATTGGGCGACCCAAGTATGCTTCAGAGATTTCCTTCATCT 160297 Query 518352 TACTTAAAATCATTGATGAAATTTGTTCTG--GGGAATATTGCTTGGATTCATTTTGATA 518409 | ||||| ||| | ||||| | || | ||| ||| ||| ||| ||| Sbjct 160296 TTTGTAAAACCATAGCAGAAATCTCCTCGGCATGGA--ATTCCTTCTTCTCACCCAAATA 160239 Query 518410 TGATACTTCAAAATATGGTTT---ATTACCAACATTAATAACTTTAAATGGCCAGTATTT 518466 ||| || ||| || || | | ||| |||||||||||||||| | Sbjct 160238 GCTTACACTAATGATTGGCTTGTCCTTTGGACCTCTAACTACTTTAAATGGCCAGTGAGT 160179 Query 518467 CATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAA 518526 |||||| ||| || ||||||| ||| | |||||||| | ||||| |||||||| Sbjct 160178 CATATCACTTTGTACTGCCTGGTCATCAAATTTCCTACCAATAAGACGTTTAGCATCAAA 160119 Query 518527 AATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTC 518586 || ||||| |||||| | ||| |||||| || |||||||| ||||| ||| | || Sbjct 160118 AACTGTATTCTCTGGATTTCTAGCAACTTGATTCTTTGCTGCATCACCAATGAGACGCTC 160059 Query 518587 TGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAAT 518646 || |||||||||| ||||||||||| ||||| || |||||||||||||| | | ||| Sbjct 160058 AGTTTCTGTAAATGCTACATATGATGGTGTTGTACGGTTACCTTGATCATTTGGGACAAT 159999 Query 518647 TTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATACC 518706 || || || ||||| ||||||||| ||||| | || || |||||||||||||| Sbjct 159998 ATCTACCGTATCATTTCTCCATACACCAACACATGAGTATGTGGTACCTAAATCAATACC 159939 Query 518707 AATAGC 518712 |||||| Sbjct 159938 AATAGC 159933 Score = 105 bits (116), Expect = 5e-17 Identities = 108/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 322243 ACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGC 322302 |||||| |||| ||| ||||||||||| |||||||| ||| | | |||| ||||| || Sbjct 160472 ACCGTAAGCAATAGCAGCTGCAGTTGGCTCATTAATGATTCTCATTACATTCAAACCAGC 160413 Query 322303 AATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGT 322362 |||| | ||| ||| |||||||| | |||| |||||| || || ||||||||||| Sbjct 160412 AATTGCACCAGCATCCTTTGTTGCTTGACGTTGTGAGTCATTGAAGTAAGCTGGTACAGT 160353 Query 322363 AATAACTGCTTTATTAATAGG 322383 || || || || ||||| || Sbjct 160352 AACTACAGCATTCTTAATTGG 160332 >seq579 Length=144132 Score = 174 bits (192), Expect = 1e-37 Identities = 1010/1589 (64%), Gaps = 49/1589 (3%) Strand=Plus/Plus Query 517139 TTATCTGCTTCTTCAAATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAG 517198 || ||| |||| |||||| | || || ||||||| | ||||| | || | || Sbjct 65071 TTGTCTTCTTCAGCAAATTGCTCTGCCTCCTTAATCATACGTTCAATATCTTCCTGTGAA 65130 Query 517199 AATCTTCCGCGATTATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCG 517258 | ||| || || ||| || || ||||| |||| ||||| || || || Sbjct 65131 AGTCTGCCCTTATCATTTGTGATGGTAATTTTCTCAGATTTACCAGTACCCTTGTCCTTT 65190 Query 517259 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 517318 ||| | || | | |||||||| | ||| | ||||| || || ||||||||||| || Sbjct 65191 GCACTGACTTGTAAAATACCATCAGTATCAATTTCAAAAGTAACCTCAATTTGAGGAACA 65250 Query 517319 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTA 517378 ||||| ||||||| ||||| || | | || |||| || || || || || Sbjct 65251 CCTCTTGGAGCAGGGGGGATTCCAGAAAGCTCGAACTTTCCGAGGAGGTTGTTGTCCTTG 65310 Query 517379 GTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAA 517438 || | | || ||||| || ||| ||||||| || | | |||||||| ||| Sbjct 65311 GTCATTGGACGCTCACCTTCATAAACTTGGATAAGTACGGCTGGCTGATTATCCTGGTAA 65370 Query 517439 GTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGT 517497 || |||| ||| ||| | || || |||| ||||||||| |||| | ||||| Sbjct 65371 GTACTAAAAACT-TGGCTCTTCTTTGTTGGAACAACAGTGTTTCTACCAATGAGCTTGGT 65429 Query 517498 CATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAAT 517557 ||||| ||||| | || || | ||| | || | ||| || ||||| | ||||| Sbjct 65430 CATAACTCCACCAACAGTCTCAATACCCAAAGTTAAAGGTGTAACATCCA-----ACAAT 65484 Query 517558 ATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATA 517617 | | |||| | | || | ||| | | ||| | ||||| | |||||||||||| Sbjct 65485 AAT---AAGTCGCT-ACCACCCTCACCTGCTAAGATACCAGCTTGTACAGCAGCACCATA 65540 Query 517618 TGCAACAGCTTCATCAGGATTAACAGTT--TCATTTAGTTTT-TTACCATTGAAAAAAT- 517673 ||||| ||||| ||||| || | || || |||| | || || | || || | Sbjct 65541 AGCAACGGCTTCGTCAGGGTTGA---TTCCTCTGTTAGGCTCCTTTCCGTCAAAGAACTC 65597 Query 517674 -TTGAAAGAAGTTGTCTT-ACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTC 517731 |||| ||| | || | ||| || ||||||| || ||||| || || || || || Sbjct 65598 CTTGATC-AAG--GCCTGGATCTTGGGGATACGAGTGGAACCTCCGACCAAAACGATCTC 65654 Query 517732 ATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACC 517791 || |||| || || | | | | ||| ||||| || | || || || | | Sbjct 65655 ATCTACCTCGGACTTCTTAATTCCAGCGTCCTCCAAAACCTTCTTGACTGGCTCGATAGT 65714 Query 517792 CGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATA 517851 | ||| |||||||||| | | || || || || ||||| || | ||| | | | Sbjct 65715 CTTTCTGAACAAGTCTGCATTCAACTCATCAAACTTGGCTCTGGTCAAAGTTTCGCTCAA 65774 Query 517852 ATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGC 517911 || | | || | |||| |||| |||| | || ||| | | || || || || Sbjct 65775 GTCTACGTCCTCCATCAAACCCTCAATCTCAACCTTAACTTGCGGGGCTGAGGAAAGAGC 65834 Query 517912 ACGTTTAGCACGTTCACATGCTGTCCTT-AGTCTTCGTAAGG---CTTTTGCTGATTGAT 517967 | || | || ||| || || || | | |||| |||| |||||| | | ||| Sbjct 65835 TCTCTTTG-AC-TTCTCAACCTCTCTTCGAAGCTTCTGAAGGGCTCTTTTG-TCA--GAT 65889 Query 517968 TCAAATCTGTTTTATAT-TTTCTCTTGAA-ATCTTCAACACACCATGTTACAAGACGATT 518025 | || ||| | | ||| ||||| ||||| | | || | || || | Sbjct 65890 TTAACGTCCTTTCCTGTCTTTGACTTGATGATCTTGATAAAG---TGGTCCATAACTCTC 65946 Query 518026 --ATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT 518083 ||| |||||||||||||| || | |||| || || || |||| |||| Sbjct 65947 TGATCGAAATCTTCACCTCCTAAATGGGTATCACCACTTGTGGCAACGACTTCAAAAACG 66006 Query 518084 CCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGT 518143 |||| || | | ||| || | |||||| || |||||||||| ||| | | | Sbjct 66007 CCATTGTCGATGGTCAAGAGGGAAACATCAAAAGTACCACCACCCAAATCGTATACCA-- 66064 Query 518144 ACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGT 518203 | || | |||| | ||| ||||| | |||| | |||| ||| || || ||||| Sbjct 66065 AAATGCTCTTCTCAGCCTTC----TTATCCAAACCAAAAGCAATAGCTGCCGCTGTTGGC 66120 Query 518204 TCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGT 518263 |||||||| || | | ||||| | ||||||||| || ||||| ||||||||||| Sbjct 66121 TCATTAATGATACGGATTACATTCAAACCAGCAATAGCACCAGCATCCTTAGTGGCTTGA 66180 Query 518264 CTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCA 518323 | || | ||| ||||| || || ||||||||||| || || | | ||||| || || Sbjct 66181 CGCTGAGCATCATTAAAGTAAGCTGGAACAGTAATTACAGCGTGCTTGACTTCCTTTCCG 66240 Query 518324 ATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGG 518383 | |||||| || | | ||||||||| ||||| ||| | |||| | |||||| Sbjct 66241 AGATAAGCTTCAGCAATCTCCTTCATTTTAACTAAAACCATAGCAGAAACCTCTTCTGGA 66300 Query 518384 GAATATTGCTTGGATTCA-TTTTGATATGATACTTCAAAATATGGTTTATTACCAACATT 518442 | |||| || ||| |||| | | || | | || || || | | || Sbjct 66301 GCCAATTGTTTCTTCTCACCCTTGACA-GTAACCTGTATGTAAGGCTTGCTGTCCTTGTT 66359 Query 518443 AATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCT 518502 | || | | |||| | | || |||| ||| || | || |||||| | Sbjct 66360 GACAATCTCATATGGTAACAAAGTCTTATCCTTTTGGACGGAGTCATCCTTAAAACGACG 66419 Query 518503 ACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTT 518562 || || | || ||| |||| || | || | |||||| |||| |||||| | || Sbjct 66420 GCCGATAAGTCTTTTCACATCGAACAATGTCTGAACTGGATTGATTGTAGCTTGGTTCTT 66479 Query 518563 GGCTGCATCTCCAATCAGATGT-TCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGC 518621 |||| || || |||| || | || || |||||||| ||||| ||||| || | | Sbjct 66480 AGCTGACTCACCGATCA-ATCTCTCATCATCAGTAAATGATACATAAGATGGTGTAATAC 66538 Query 518622 GATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAAC 518681 | || || || ||||| | ||| ||||| ||| ||||||||| | | ||| ||||| Sbjct 66539 GGTTGCCCTGTTCATTTGGAATGATTTCTACTCTACCATTTTTGTAGATACCAACACATG 66598 Query 518682 TAAAAGTTGTTCCTAAATCAATACCAATA 518710 | |||| || |||||||| ||||||||| Sbjct 66599 AATAAGTAGTACCTAAATCGATACCAATA 66627 >seq335 Length=109725 Score = 109 bits (120), Expect = 4e-18 Identities = 193/276 (70%), Gaps = 9/276 (3%) Strand=Plus/Plus Query 636275 TATTATGATTTCATTCACAAAGAACTTATTACTTTTTCTGTGGAT--GACGTTCTTAGAT 636332 |||| |||||| ||||| ||||||||| | || || || ||| ||| ||||| Sbjct 4026 TATTTTGATTTTATTCATAAAGAACTTGTA--TTATTTAGTAGATATGACACCACTAGAT 4083 Query 636333 CTGTTCCTAATTTAATGGATGGATTTAAACCATCACATCGCAAAGTATTTTATGGTTCTG 636392 || |||| |||||| |||||||||| ||||| || | |||||| ||| || | Sbjct 4084 CTATTCCAAATTTATTGGATGGATTAAAACCTGGCCAAAGAAAAGTACTTTTTGCAACAT 4143 Query 636393 TTGAAAAGAATATTTATAAGCAAGAGATTAAAGTATCAGATTTGACTGGTTTTGTCTC-G 636451 || ||||||| || |||| || ||||||| || | || |||||| ||| | | Sbjct 4144 TTAAAAAGAAACTTAATAATGAAC---TTAAAGTTGCACAATTAGCTGGTTATGTTGCTG 4200 Query 636452 AATATGACGAAATATCATCATGGTGATCAATCATTATCATCAACTATTGTCGGAATGGCT 636511 || || || || || || || || |||||| | |||||||| |||||| Sbjct 4201 AACATAGCGCT-TACCACCACGGAGAATCATCATTGCAAAGTACTATTGTAAACATGGCT 4259 Query 636512 CAAAATTATGTGGGAAGTAACAATCTCAATTTGTTA 636547 ||||||| ||| |||||||||||||| ||||| ||| Sbjct 4260 CAAAATTTTGTTGGAAGTAACAATCTTAATTTATTA 4295 Score = 107 bits (118), Expect = 1e-17 Identities = 239/358 (67%), Gaps = 33/358 (9%) Strand=Plus/Plus Query 634298 AAAATTATTTTCAAGGAAATTACTTATGTACCTGGTCTATATAAAATTTATGATGAAGTA 634357 ||||| ||| ||| |||| |||||||||||| ||||||| |||| ||||||| | Sbjct 1797 AAAATGGTTTATAAGACCATTAATTATGTACCTGGATTATATAAGATTTTTGATGAAATC 1856 Query 634358 ATTGTAAATGCGGCAGATCATAA--CAAGAGA--TGTCAAA----------CATGTAAT- 634402 | || ||||| || ||| ||| | ||||| | |||| ||| |||| Sbjct 1857 TTAGTTAATGCTGCTGATGTTAAAGCTAGAGAAATTTCAACTAAAAATAATCATTTAATT 1916 Query 634403 -----AT-------TATCAAAGTTGATATCGATC---AAAAAACAGGTCAAATTTCTGTT 634447 || ||| |||||||| || || |||||| || ||||| | ||| Sbjct 1917 GAGAAATGTACTTGTATTAAAGTTGAAATTAATAGAGAAAAAAAAG---AAATTACAGTT 1973 Query 634448 TGGAATAATGGTGATGGTATTGATGTAGCAATTCATAAAGAACATAATATATGGGTACCA 634507 | ||| |||| || || ||| ||| ||| |||| ||||||| | ||| || ||| Sbjct 1974 TATAATGATGGAGAAGGAATTCCAATAGAAATACATAGAGAACATCAAGTATATGTTCCA 2033 Query 634508 TCAATGATTTTTGGAGAACTTTTAACGTCTACTAATTACGATAAAAACGAGGAAAAAACT 634567 | | ||||||||| | | ||||| ||| |||||| ||| | || || || | | | Sbjct 2034 GAATTAATTTTTGGACATTTATTAACTTCTGATAATTATGATGATAATGAAGATAGAGTT 2093 Query 634568 GTTGGTGGTAAAAATGGTTTTGGCGCTAAGCTTGCTAATATTTATTCTGTTGAATTTA 634625 ||| || | |||||||||||| || || ||| ||||||| | ||| |||||||| Sbjct 2094 ACTGGAGGAAGAAATGGTTTTGGAGCAAAACTTACTAATATCTTCTCTAGTGAATTTA 2151 >seq401 Length=300945 Score = 105 bits (116), Expect = 5e-17 Identities = 267/400 (67%), Gaps = 16/400 (4%) Strand=Plus/Minus Query 517244 GTTGATTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACT 517303 ||||| |||||| ||| ||||| | ||| ||||| ||||| | |||||| || ||| Sbjct 206504 GTTGACTTATCAATAGCACCAACATTCATAATTCCATTCGCATCAATATCAAAAGTTACT 206445 Query 517304 TCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGA 517363 ||||||||||| || || || | || || || || || || | |||| ||| || Sbjct 206444 TCAATTTGAGGAACTCCCCTAGGGGCTGGAGGAATTCCCATCATTTCAAATTGTCCAAGT 206385 Query 517364 TTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTT 517423 |||||||| || |||| || ||| |||| ||||| | || ||| |||| Sbjct 206384 AACTTATTATCAGCAGCAAATTCTCTTTCTCCCTGGAAAACCTTAATTCCAACCTGAGTT 206325 Query 517424 TGATTATCTGAATAAGTTGTAAATACTCTGGAT-TTTTTACAAGGAATTGTTGTGTTTCT 517482 || ||||| | ||| | |||||| ||| | || ||| || || || |||||||| Sbjct 206324 TGGTTATCCGCTGCAGTGGAGAATACT-TGGCTCTTCTTAGTGGGGATCGTGGTGTTTCT 206266 Query 517483 ATCAATAATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGAC 517542 || ||| | || | || ||||| ||||| | ||| | ||| | |||||| || Sbjct 206265 ATTAATTAGTCGAGTAAAAACTCCACCCAAAGTTTCGATACCTAAAGATAAAGGAGTAAC 206206 Query 517543 ATCAACTAGGACAATAT-TTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTT 517601 ||||| || | || || |||| |||| || || ||| || | | || | Sbjct 206205 ATCAAGTAACAAAAGATCCTTGA----TTTC-TCCTTT----CAA----AACACCAGCCT 206159 Query 517602 GAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAAC 517641 | || ||||| || |||||| || |||||||| ||||| Sbjct 206158 GTATTGCAGCTCCCATTGCAACGGCCTCATCAGGGTTAAC 206119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780780071330218