Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20sp._20chipmunk_20LX- 2015_20[genbank_20GCA_5F000831705.1_202015-02-03] 853 sequences; 9,509,783 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq401 251 6e-61 seq113 224 8e-53 seq579 159 3e-33 seq335 136 3e-26 seq13 123 2e-22 seq849 118 9e-21 seq224 104 2e-16 seq38 89.7 4e-12 seq445 87.8 1e-11 >seq401 Length=300945 Score = 251 bits (278), Expect = 6e-61 Identities = 487/705 (69%), Gaps = 43/705 (6%) Strand=Plus/Minus Query 368481 TGAAACATTTAGAGAAAAAATGTTAAATAATAATTCTAAAATAAATTGGATGCCATCTAA 368540 |||| | || | ||||| | | |||| ||||||| |||| | |||||| || | | Sbjct 111777 TGAATCTTTAAAAGAAAGATTATTAATTAATAATGAAAAAACTAGTTGGATTCCTAATTA 111718 Query 368541 TATTGGA-ACAAAACATTTTGATAATTGGCTCCAAAATTCAGTTGATTGGTGTATTTCAA 368599 | || | | |||| |||| |||||||| | ||| || | ||||||||| | || Sbjct 111717 TGTTAAAGAGAAAAGATTTC-ATAATTGGTTACAAGATGCTAGAGATTGGTGTGT---AA 111662 Query 368600 GAAGTA---GGTTTTGGGGAACTCCAATTCCAGTATGGAAATCTGATGATGGTGAAGAAA 368656 | ||| | ||||||||||| ||||| || ||||| ||| || ||| | | | Sbjct 111661 GTCGTAATCGATTTTGGGGAACACCAATACCTATATGGGTATCAGAAGATTATACTGTTA 111602 Query 368657 TTGTTTGTATAGGTTCAATTAAAGAATTGCAAGAATT---ATCTGGTGTGCAAAAT---- 368709 || ||||| ||| || |||||||| || || |||| | | ||||| Sbjct 111601 TTAAATGTATTGGTAGTATAGAAGAATTGAAATCTTTGGCATCTAATTTAAAAAATGAAG 111542 Query 368710 --ATTAGTGATTTACATATTGATAAAATTGATCACATTAAAATTCC--ATCAAAGAAAGG 368765 |||| |||| ||||| | || |||||| | ||| ||||||| ||| |||| | Sbjct 111541 AAATTACTGATATACATCGTCATTTTATTGATTATATTGAAATTCCTGATCCAAGAGGAG 111482 Query 368766 AAAAGGTTTATTGTCTC-------GAGTTGAAGGAGTTTTGGATTGCTGGTTTGAATCAG 368818 |||| |||| || || |||||| |||||| ||||| ||||||||||| | Sbjct 111481 AAAA---TTATCCTCCATTAAAAAGAATTGAAGAAGTTTTTGATTGTTGGTTTGAATCTG 111425 Query 368819 GTTCTATGCCTTATGG-TCAAATACATTATCCATTTGATAACGCAAAATACTTTGATAAT 368877 |||| |||||||||| || | || ||||||||||||| || | ||| ||| | ||| Sbjct 111424 GTTCAATGCCTTATGCATCTATTA-ATTATCCATTTGAAAATAAAGAATTATTTAACAAT 111366 Query 368878 GATAAAGATTATGTGGCTGATTTTGTAACAGAATCAATTGATCAAACACGTGGTTGGTTT 368937 | ||| || |||||||||| ||| | | ||||||||| | || |||||| Sbjct 111365 -----ATATTTCCTG-CTGATTTTGTTGGTGAAGGATTAGATCAAACAAGAGGATGGTTT 111312 Query 368938 TATACCCTATTAGTATTATCCACAGCTATTTTCGATAAACCGGCTTTTAAAAATGTAATA 368997 ||||| || | |||||||| ||||| | || ||| |||| |||||||||||| | || Sbjct 111311 TATACTTTAATGGTATTATCTACAGCATTATTTGATCAACCAGCTTTTAAAAATATTATT 111252 Query 368998 GTAACTGGTATTGTTAATGCATCTGATGGTCAAAAGATGTCAAAAAG--TAAGGGTAATT 369055 || | |||| | ||| |||||||||||| |||| ||||||||||| ||| |||| Sbjct 111251 GTTAATGGTTTAGTTTTAGCATCTGATGGTAAAAAAATGTCAAAAAGATTAA--AAAATT 111194 Query 369056 ATTCCGATCC-TAATATTTTAATTGATAAATTTGGTGCTGATACTTTGAGATTATACCTA 369114 || | ||||| | | || || || |||||| |||||| ||| |||| ||||||| || Sbjct 111193 ATCCTGATCCATTAGATATT-GTTAATAAATATGGTGCAGATTCTTTAAGATTATTTTTA 111135 Query 369115 TTGTCATCACCTGTAGTAAAAGCAGAATCTATTAAATTTGATGAA 369159 | ||||| ||||||| ||| ||| || | | |||| | ||| Sbjct 111134 ATTAATTCACCAGTAGTAAGAGCTGAAACTTTAAGATTTAAAGAA 111090 Score = 132 bits (146), Expect = 4e-25 Identities = 211/300 (70%), Gaps = 2/300 (1%) Strand=Plus/Plus Query 552303 GATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATC 552362 |||||||||||| ||||| | ||| | ||||| | || || || | ||| || || Sbjct 206203 GATGTTACTCCTTTATCTTTAGGTATCGAAACTTTGGGTGGAGTTTTTACTCGACTAATT 206262 Query 552363 GATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAAT 552422 ||||||| || || || || ||| || | ||||| || || | ||||| Sbjct 206263 AATAGAAACACCACGATCCCCACTAAGAAGAGCCAAGTATTCTCCACTGCAGCGGATAAC 206322 Query 552423 CAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAAT 552482 |||||| ||| |||| | |||| | ||||||||| |||| || |||||||| Sbjct 206323 CAAACTCAGGTTGGAATTAAGGTTTTCCAGGGAGAAAGAGAATTTGCTGCTGATAATAAG 206382 Query 552483 CAACTTGGT-ACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAAT 552541 |||||| | ||| || | | || |||||||| || ||| | ||||| || ||||| Sbjct 206383 TTACTTGGACAATTTGAAATGATG-GGAATTCCTCCAGCCCCTAGGGGAGTTCCTCAAAT 206441 Query 552542 TGAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAAATC 552601 |||||| ||||| ||||| ||||| ||||||||| ||||||| |||| |||||| || Sbjct 206442 TGAAGTAACTTTTGATATTGATGCGAATGGAATTATGAATGTTGGTGCTATTGATAAGTC 206501 >seq113 Length=180777 Score = 224 bits (248), Expect = 8e-53 Identities = 385/554 (69%), Gaps = 11/554 (2%) Strand=Plus/Plus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 |||||| ||||| |||||||| |||||||| ||||||||||| ||| ||||| || Sbjct 159932 AGCTATTGGTATTGATTTAGGTACCACATACTCATGTGTTGGTGTATGGAGAAATGATAC 159991 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 || || ||| | | ||||||||||||||| | || || ||||| ||||| | || || Sbjct 159992 GGTAGATATTGTCCCAAATGATCAAGGTAACCGTACAACACCATCATATGTAGCATTTAC 160051 Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAA 550170 |||||||| | | | |||||||||||||||| |||||| || | ||||| || Sbjct 160052 AGAAACTGAGCGTCTCATTGGTGATGCAGCAAAGAATCAAGTTGCTAGAAATCCAGAGAA 160111 Query 550171 TACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGC 550230 ||| ||||||||||||||||| | ||||| || | ||| |||| | | || || Sbjct 160112 TACAGTTTTTGATGCTAAACGTCTTATTGGTAGGAAATTTGATGACCAGGCAGTACAAAG 160171 Query 550231 AGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTC--TGGAAAACCTTAT-ATT-- 550285 ||||||| || ||||| || || | |||| | | | ||| || | || ||| Sbjct 160172 TGATATGACTCACTGGCCATTTAAAGTAGTTAGAGGTCCAAAGGACAAGCCAATCATTAG 160231 Query 550286 --GAAGCTACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGG 550343 |||||| | || || | || |||| | || | ||||| |||||| Sbjct 160232 TGTAAGCTATT--TGGGTGAGAAG--AAGGAATTCCATGCCGAGGAGATTTCTGCTATGG 160287 Query 550344 TTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAG 550403 ||||| || ||||| ||| | || | | |||| | ||| | |||| | Sbjct 160288 TTTTACAAAAGATGAAGGAAATCTCTGAAGCATACTTGGGTCGCCCAATTAAGAATGCTG 160347 Query 550404 TAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGAC 550463 || | ||||||||||| || || |||||||||||||||||||| || || |||||||| Sbjct 160348 TAGTTACTGTACCAGCTTACTTCAATGACTCACAACGTCAAGCAACAAAGGATGCTGGTG 160407 Query 550464 GTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCAT 550523 |||||||| | ||||| | | || || ||||| || ||||| ||||| |||| | Sbjct 160408 CAATTGCTGGTTTGAATGTAATGAGAATCATTAATGAGCCAACTGCAGCTGCTATTGCTT 160467 Query 550524 ATGGACTTGATAAA 550537 | || ||||||||| Sbjct 160468 ACGGTCTTGATAAA 160481 Score = 215 bits (238), Expect = 4e-50 Identities = 554/832 (67%), Gaps = 25/832 (3%) Strand=Plus/Plus Query 551781 GCTACTAGTGGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGTATCATGG 551840 |||||| ||| || |||| | ||||| ||||| |||||||| ||||| ||| || Sbjct 160581 GCTACTGCTGGTGACACTCACTTGGGTGGTGAAGACTTTGATAACAGACTTGTAGAATTC 160640 Query 551841 TGTGTTGAAGATTTTAAACGAAAAAACAAAGTT---GATCTATCTACATCTGCCAAAGCT 551897 ||||| |||||||||| |||| || | || | || || ||||| ||| | |||| Sbjct 160641 TGTGTACAAGATTTTAAGAGAAAGAATAGAGGTATGGACTTAACTACAAATGCTAGAGCT 160700 Query 551898 CTTCGTCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAA 551957 | | | |||||||| ||||| | || || || || | |||||| || || Sbjct 160701 TTAAGAAGATTAAGAACTCAATGCGAGCGTGCAAAGAGAACTTTATCATCTTCCACCCAG 160760 Query 551958 ACCACTATTGAAGTAGATTCATTATTTGAGGGAATTGATTATA-ATACGCCTATTTCGAG 552016 | ||||||||| ||||||| | | || || ||||||||| | ||| ||| || Sbjct 160761 GCTACTATTGAATTAGATTCGCTTTACGAAGGTATTGATTATTCAGTTGCC-ATTAGTAG 160819 Query 552017 GGCCAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACA 552076 || | |||||| || | ||| ||||| || | ||| | | ||||| || | Sbjct 160820 AGCTAGATTTGAGGAACTCTGTGCTGATTATTTCCGTGCAACTTTAGCTCCAGTTGAGAA 160879 Query 552077 AGTTTTAAGAGATTCAAAGATTGATAA---ATCCAAAGTACATGAAATTGTGCTTGTTGG 552133 |||| | | ||| | || || || ||| |||||||| |||| | ||||| Sbjct 160880 AGTTCTCAAGGATGCTGGTATGGACAAGAGATCT---GTACATGATGTTGTCTTAGTTGG 160936 Query 552134 TGGATCTACAAGAATTCCTAAAATTCGCGAAATG-TTAAGTTCTTATTTCAATGGTAAAA 552192 ||| ||||| | ||||| ||| ||| | || || || || || ||| ||||| Sbjct 160937 TGGCTCTACCCGTATTCCAAAAGTTCAGGCTTTGATTCAGGAATTCTT-CAACGGTAAGG 160995 Query 552193 A---ATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAG 552249 | || || | || ||||||||||||| |||||||| |||||||| || |||||| Sbjct 160996 AGCCATGCAAAGCAA---TTAATCCAGATGAAGCTGTTGCTTATGGTGCTGCTGTTCAAG 161052 Query 552250 CAGCTATTCTTTCTGG---ACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATG 552306 | || || | ||| |||| | || | | | | |||| ||| |||| Sbjct 161053 CTGCAATCTTAAATGGTGAACAATCCTCTGCCGTTC-AGGATCTCTTGTTGTTG--GATG 161109 Query 552307 TTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATA 552366 || |||| |||| || ||||||||||| | ||| ||| ||||||| || ||||| || Sbjct 161110 TTGCTCCATTATCACTCGGTTTAGAAACTGCTGGTGGTGTTATGACCAAGCTTATTGAGC 161169 Query 552367 GAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAA 552426 | ||||| ||||| || || || | | || || |||| ||| | ||||| |||| Sbjct 161170 GTAATACAACTATCCCAGCAAAGAAGACACAAGTCTTCACTACTTATGCTGATAACCAAA 161229 Query 552427 CTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAAC 552486 || ||| ||| ||| | | ||| || || ||| | ||||| || || | | | Sbjct 161230 GTGGTGTCTTAATCCAAGTCTATGAGGGTGAGAGAGCTATGACTAAGGACAACCACCTCC 161289 Query 552487 TTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAG 552546 | || | || || | || ||||| || || || || | || || || || ||||| | Sbjct 161290 TCGGAAAATTCCATCTTGATGGTATCCCACCAGCACCGAGGGGTGTGCCACAGATTGAGG 161349 Query 552547 TTACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAA 552598 | || || ||||| ||||||||||| || |||||||| ||||| |||||| Sbjct 161350 TCACCTTTGATATTGATGCCAATGGTATCTTGAATGTCTCTGCTGTTGATAA 161401 >seq579 Length=144132 Score = 159 bits (176), Expect = 3e-33 Identities = 372/552 (67%), Gaps = 12/552 (2%) Strand=Plus/Minus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 || ||| ||||| |||||||| || || ||| ||||||||| | | ||||||||| Sbjct 66630 AGTTATTGGTATCGATTTAGGTACTACTTATTCATGTGTTGGTATCTACAAAAATGGTAG 66571 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 ||| ||||| ||| | ||||| || || ||| | | ||| ||||||||||| || || || Sbjct 66570 AGTAGAAATCATTCCAAATGAACAGGGCAACCGTATTACACCATCTTATGTATCATTTAC 66511 Query 550111 GGAAACTGA-ACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCA 550169 || ||| | ||| | | ||||| |||| || | ||||| || ||||| Sbjct 66510 TGATGATGAGAGATTGA-TCGGTGAGTCAGCTAAGAACCAAGCTACAATCAATCCAGTTC 66452 Query 550170 ATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACT--GTTCA 550227 | || | || |||| ||| | | || || | ||||||| ||| |||| || || Sbjct 66451 AGACATTGTTCGATGTGAAAAGACTTATCGGCCGTCGTTTTAAGGAT--GACTCCGTCCA 66394 Query 550228 GGCAGATATGAAGCATTGG--CCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATT 550285 |||| || | ||| || | | ||||| || | || ||||| || Sbjct 66393 AAAGGATAAGA--CTTTGTTACCATATGAGATTGTCAACAAGGACAGCAAGCCTTACATA 66336 Query 550286 GAAGCTACTCATGAAGGATCTGTT-AAACAATTTTCACCAGAACAAATTTCATCTATGGT 550344 | | |||| | |||| | | |||||||| | |||||| | |||| ||||||| Sbjct 66335 CAGGTTACTG-TCAAGGGTGAGAAGAAACAATTGGCTCCAGAAGAGGTTTCTGCTATGGT 66277 Query 550345 TTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGT 550404 |||| | |||||||| | | || |||| | | || | ||||| | | | || || Sbjct 66276 TTTAGTTAAAATGAAGGAGATTGCTGAAGCTTATCTCGGAAAGGAAGTCAAGCACGCTGT 66217 Query 550405 AATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACG 550464 ||| ||||| ||||| || |||||||| | || |||||||| ||||| |||||||| Sbjct 66216 AATTACTGTTCCAGCTTACTTTAATGATGCTCAGCGTCAAGCCACTAAGGATGCTGGTGC 66157 Query 550465 TATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATA 550524 ||||||||| | ||||| | ||||| || ||||| || || || || || |||| | Sbjct 66156 TATTGCTGGTTTGAATGTAATCCGTATCATTAATGAGCCAACAGCGGCAGCTATTGCTTT 66097 Query 550525 TGGACTTGATAA 550536 ||| | ||||| Sbjct 66096 TGGTTTGGATAA 66085 >seq335 Length=109725 Score = 136 bits (150), Expect = 3e-26 Identities = 340/507 (67%), Gaps = 21/507 (4%) Strand=Plus/Minus Query 428102 CCGGTTCCAATTCCTTCTGTACCATTTACAAGAATCATTGGAATGACTGGTGCATAATAT 428161 || |||||||| || || |||||||| || | |||||||||||| | ||| | |||||| Sbjct 4519 CCTGTTCCAATACCGTCAGTACCATTCACCAAAATCATTGGAATTATTGGAACGTAATAT 4460 Query 428162 TGTGGTTCAATCATTTTATTATCTTCATAT-TGTAAATGTAAAATATCAAAATCATGCTC 428220 || ||||| || ||| |||||| |||| | ||| | | | |||| || Sbjct 4459 AAAGGCTCAATTTGTTGTCCATCATCATATAAGTAAGT-TAATAAAGGATCATCAGCTTC 4401 Query 428221 GATAAATAtttttttAGCCAATTCATCAAGTTGTGTAAAGATATATC---TTGCGCTTGC 428277 ||||| | | ||| | ||| || | ||||| ||||| | |||||||| Sbjct 4400 TGGGAATATATATCTAGTCCATTTTGATAGCTTAGTAAATATATAACGAGCAGCGCTTGC 4341 Query 428278 GGAATCTTTACCTCCTGACATTCTAGTTCCAAATTGTCCATTAGGCATCAATAAATTAAT 428337 |||||| || || | ||||| | |||||||| ||| ||| |||||||||| Sbjct 4340 ---ATCTTTTCCGCCCTCCTTTCTACTACCAAATTGACCACAAGGTTCTAATAAATTAAG 4284 Query 428338 ATTATTACTTCCCACATAATTTTGGGCCATATTAACAATGGTACTAGTTAAGGATTGTTC 428397 ||| |||||||| ||| ||||||| ||||| || ||||| ||||| || ||| ||| Sbjct 4283 ATTGTTACTTCCAACAAAATTTTGAGCCATGTTTACAATAGTACTTTGCAATGATGATTC 4224 Query 428398 ACCATGATGATATTTAGTTCT---TTTTGAAACTGCACCTTGTAATTCTGATACCTTTAT 428454 || || || || || || || | ||| ||| ||||| || || || | Sbjct 4223 TCCGTGGTGGTA---AGCGCTATGTTCAGCAACATAACCAGCTAATTGTGCAACTTTAAG 4167 Query 428455 TTCTTCTTTATAAATACCTTCTTCTACTGATCCATAAAATACTTTGCGTTGTGATGGTTT 428514 ||| || ||| | ||| || | || | || ||| |||||| | ||| ||||| Sbjct 4166 TTC--ATTATTAAGTTTCTT-TTTAAATGTTGCAAAAAGTACTTTTCTTTGGCCAGGTTT 4110 Query 428515 GAATCCATCCATAATATTAGGTATAGATCTTAAATTATC--ATCCACTGAGAATGATATT 428572 |||||||||| | ||| || |||||||| | || ||| ||| ||| ||| Sbjct 4109 TAATCCATCCAATAAATTTGGAATAGATCTAGTGGTGTCATATCTACT--AAATAATACA 4052 Query 428573 AGTTCTTGATGAATGAAATCATAATAT 428599 ||||||| |||||| |||||| ||||| Sbjct 4051 AGTTCTTTATGAATAAAATCAAAATAT 4025 >seq13 Length=173107 Score = 123 bits (136), Expect = 2e-22 Identities = 280/411 (68%), Gaps = 10/411 (2%) Strand=Plus/Plus Query 344255 TTTTATCTCCCACCATTTGTTTGAGACGTTGATAATATGTTGGACCAATGAATATT-TTA 344313 |||| || | ||||| ||||| || | |||||||| ||||| ||||| || ||| || Sbjct 95606 TTTTGTCGTCTACCATATGTTTTAGTCTCTGATAATAAGTTGGTCCAATAAAGATTCTTG 95665 Query 344314 ACTTCCATTCTTTGTCCCGTCATTCCATTATACATTGTTTCATTTCCCCATGCTTCATGT 344373 ||| | | ||||| ||| || ||||| |||||| ||||||||| || ||| || Sbjct 95666 ACT-CTAATCTTTTTCCTGTGTGGCCATTGTACATTACTTCATTTCC--ATTTTTC-TGA 95721 Query 344374 --CCTAAAGCTACTAAATCATCATTAATTTTATTAATAT-TAACTCCTGTAAATGGAGTT 344430 || | | || || | | | ||| || | | ||| | ||||| |||||| Sbjct 95722 AACCCAGAACTGTGTAAACGGCTAGATATTTCTTCAACTGTAATTTTCGTAAAAGGAGTT 95781 Query 344431 GCATCTCCATATACCCCTTTAATTGCACAAACTTTACCTAGTAAACATTCAATTAATTGA 344490 ||||| || | | |||| |||||| || ||||||| || | ||||||||||| || Sbjct 95782 GCATCACCCTCCAATCCTTGAATTGCGCACGCTTTACCAAGAAGGCATTCAATTAAATGC 95841 Query 344491 CCTATCGTCATACGTTTGGGCATACAATTAGGATTAATAATAATATCAGGAATTAATCCT 344550 || || ||||||||| || ||| || |||||| |||||||| || ||||| | ||| Sbjct 95842 CCAATTGTCATACGTGATGGAATAGCATGAGGATTCATAATAATGTCTGGAATAATTCCA 95901 Query 344551 GATTTTGTGAATGGAAGATCTGCA-CGATGAATTTTAAATCCAACTGTTCCTTTTTGTCC 344609 || || || || | ||| || || || ||| | || | ||| || ||||| || Sbjct 95902 TCTTGGGTAAAGGGCATATCCTCAGTTCTGTATGTTATA-CCTATTGTACCCTTTTGGCC 95960 Query 344610 AGCTCTTGATGAGAATTTATCACCTACTGCTGGAATTCTTTCTGATCTAAC 344660 | || |||| |||||||| || || || |||||| || ||||| Sbjct 95961 ATGCCTAGATGCAAATTTATCTCCAACATGAGGTATTCTTATTGTCCTAAC 96011 >seq849 Length=33325 Score = 118 bits (130), Expect = 9e-21 Identities = 143/191 (75%), Gaps = 4/191 (2%) Strand=Plus/Plus Query 563286 TTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAAT 563345 ||||| ||||||||||||| |||||||||| ||| || ||||| ||||| || || || Sbjct 19437 TTTGG--ATATTGTAATCAGATAGAGTTCTTCCATCCTCTAGTTGCTTTCCTGCGAAGAT 19494 Query 563346 AAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTC 563405 | | ||| || || || ||||||||||| || |||||||| ||| ||| || ||| Sbjct 19495 CAAACGTTGTTGGTCGGGTGGAATTCCTTCCTTGTCTTGAATCTTTGCTTTAACATTCTC 19554 Query 563406 AATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGA 563464 ||||||||| | | ||| ||| | || | ||| || || || | ||||||||| | Sbjct 19555 AATTGTATCTGAAGGCTCTAC-TTCCAATGTGATAGTCTTTCCTGTCAAAGTTTTAACAA 19613 Query 563465 AAATTTGCATA 563475 |||| |||||| Sbjct 19614 AAATCTGCATA 19624 Score = 118 bits (130), Expect = 9e-21 Identities = 143/191 (75%), Gaps = 4/191 (2%) Strand=Plus/Plus Query 563286 TTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAAT 563345 ||||| ||||||||||||| ||||||||| || || | |||||| || ||||| || Sbjct 19665 TTTGG--ATATTGTAATCAGAGAGAGTTCTTCCGTCCTCTAATTGTTTCCCCGCAAAGAT 19722 Query 563346 AAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTC 563405 | | ||| |||||||| ||||||||||| ||||||||||| ||| ||| || ||| Sbjct 19723 CAAACGTTGTTGATCAGGTGGAATTCCTTCCTTATCTTGAATCTTTGCTTTAACATTCTC 19782 Query 563406 AATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGA 563464 ||||||||| | | ||| ||| | || | ||| || || || | ||| ||||| | Sbjct 19783 AATTGTATCTGAAGGCTCTAC-TTCCAATGTGATAGTCTTTCCTGTCAAAGTCTTAACAA 19841 Query 563465 AAATTTGCATA 563475 |||| |||||| Sbjct 19842 AAATCTGCATA 19852 Score = 109 bits (120), Expect = 4e-18 Identities = 141/191 (74%), Gaps = 4/191 (2%) Strand=Plus/Plus Query 563286 TTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAAT 563345 ||||| ||||||||||||| ||||||||| || || | ||||||||| ||||| || Sbjct 19209 TTTGG--ATATTGTAATCAGAGAGAGTTCTTCCGTCCTCTAATTGTTTTCCTGCAAAGAT 19266 Query 563346 AAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTC 563405 | | ||| || || || ||||||||||| || |||||||| ||| ||| || ||| Sbjct 19267 CAAACGTTGTTGGTCGGGTGGAATTCCTTCCTTGTCTTGAATCTTTGCTTTAACATTCTC 19326 Query 563406 AATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGA 563464 |||||||| | | ||| ||| | || | ||| || || || | ||||||||| | Sbjct 19327 GATTGTATCTGAAGGCTCTAC-TTCCAATGTTATAGTCTTTCCCGTCAAAGTTTTAACAA 19385 Query 563465 AAATTTGCATA 563475 |||| |||||| Sbjct 19386 AAATCTGCATA 19396 >seq224 Length=184738 Score = 104 bits (114), Expect = 2e-16 Identities = 122/165 (74%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 930654 AAAGTATTAATTGATTTTTCTTCACCAAATATTGCCAAAGAAATGCATATTGGACATTTG 930713 |||||| | | ||||| || |||||||| ||||| |||||||||||| | ||||||||| Sbjct 73606 AAAGTAATTGTCGATTTCTCATCACCAAACATTGCAAAAGAAATGCATGTGGGACATTTG 73665 Query 930714 CGTTCTACCATTATTGGAGAATCTTTATGTAGATTATATGAATATTGTGGAAGTAAAGTT 930773 | ||||| || ||||| || | ||||||| | ||| || | ||| | | || Sbjct 73666 AGATCTACAATCATTGGTGACACGACATGTAGAATTCTTGAGTACTTAGGATTTGAGGTA 73725 Query 930774 CATCGAGTCAATCATATTGGTGATTGGGGAACACAATTTGGTATG 930818 |||| |||||| |||| |||||||| || ||||| |||||| Sbjct 73726 TTAAGAGTTAATCATGTTGGAGATTGGGGTACTCAATTCGGTATG 73770 >seq38 Length=21219 Score = 89.7 bits (98), Expect = 4e-12 Identities = 248/375 (66%), Gaps = 8/375 (2%) Strand=Plus/Plus Query 390811 ATACCATTATCACCATATACACATTGAATTAATTTGTCATTGGCATTTCTTACGGTACCA 390870 || |||| || ||||| | | | |||| | | | |||| ||| || ||||| | | Sbjct 2422 ATTCCATCTTCTCCATAAAGAAACTGAACAATATCGCCATTACTATTCCTAACGGTTCTA 2481 Query 390871 TCATACTCTACTTTAATGTCTTCTAACATTTTAACTAATTTTCTTTGGATATAACCAGTG 390930 ||||| | ||| || || || | | || | || | ||||||| ||||| || || Sbjct 2482 TCATATTGTACCATACAATCCTCCATCGCCTTTATTAGTCTTCTTTGTATATACCCTGTT 2541 Query 390931 TCTGCAGTTTTAATTGCAGTATTAATAATACCTTCTCTTCCTGCCATAACTTGGAAGAAA 390990 || | ||||||| ||||||| ||| || |||||||||||| |||| | || || ||| Sbjct 2542 TCCGAAGTTTTACACGCAGTATCAATGATTCCTTCTCTTCCTCCCATGGCATGAAAAAAA 2601 Query 390991 AATTCCATAGGATTGAGTCCAGAAATAAATG-ATCCAAAACAAAA--TCCTCTTGCAGAA 391047 | || |||| | || || |||| | | | || |||||||| | ||| | | Sbjct 2602 ACCTCTTGAGGAGTAAGGCCTGAAAGATACGAATTTGAAACAAAACCACGACTTTC---A 2658 Query 391048 GGACTATCATCATGTTGTGCAAACAT-AGGTAATGTTCTATTATTAAATCTTTTTTGAAT 391106 || | || ||||| || | | | || || || |||||| |||||| | |||| Sbjct 2659 GGCCCATAATCATATT-TCAAGAAATGCGGCAAGCTTCTATCCCTAAATCCAAATGGAAT 2717 Query 391107 TCGTTTATCTTCGACAATAACTTGTCCAATACATCCTGCAATCTGTGCAGCATTCATAGC 391166 || ||| |||| || | |||||||| |||| | |||||||| | ||| |||| Sbjct 2718 ACGCTTACCTTCAACGTTTTGTTGTCCAACACATGCCATAATCTGTGAAATATTTATAGT 2777 Query 391167 TGTTCCTGAACTTCC 391181 | |||| ||||| Sbjct 2778 GGATCCTTTGCTTCC 2792 >seq445 Length=134117 Score = 87.8 bits (96), Expect = 1e-11 Identities = 129/183 (70%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 563292 AATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCT 563351 ||||||||| |||| || |||||| |||||| | ||| ||||| ||||| || || | Sbjct 79402 AATATTGTAGTCAGATAAAGTTCTGCCATCTTCCAATTGCTTTCCTGCAAAGATCAGACG 79343 Query 563352 TTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGT 563411 || |||||||| ||||| || ||||| || || || ||| || || |||||| || Sbjct 79342 CTGTTGATCAGGTGGAATGCCCTCTTTGTCCTGGATCTTTGCCTTAACATTCTCAATGGT 79283 Query 563412 ATCAGTGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTG 563471 || | | | ||| | || | || || || || | |||||| || |||||||| Sbjct 79282 GTCGGAAGGCTCAACTTCCAATGTGATGGTCTTTCCTGTTAAAGTTTTTACAAAAATTTG 79223 Query 563472 CAT 563474 ||| Sbjct 79222 CAT 79220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029250889512970