Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptosporidium_20sp._20chipmunk_20LX-
2015_20[genbank_20GCA_5F000831705.1_202015-02-03] 853 sequences; 9,509,783 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq113 291 5e-73
seq401 239 3e-57
seq579 228 5e-54
seq224 129 4e-24
seq849 125 5e-23
seq335 114 8e-20
seq445 104 2e-16
seq290 100 2e-15
>seq113
Length=180777
Score = 291 bits (322), Expect = 5e-73
Identities = 654/971 (67%), Gaps = 21/971 (2%)
Strand=Plus/Plus
Query 475310 GGAACTCATGACGTAACTTTACTATCACTCGAAGATGGTCTTTTCTCTGTAAGAGCAACA 475369
|| ||| ||| ||| | ||| || | | || |||||| |||| || | || ||
Sbjct 160527 GGTACTTTTGATGTATCATTATTAACTATTGAGGATGGTATTTTTGAAGTTAAGGCTACT 160586
Query 475370 GCTGGAGATTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGTATCATGGTGTGTT 475429
||||| || | || | ||||||||||| |||||||| ||||||||| || |||||
Sbjct 160587 GCTGGTGACACTCACTTGGGTGGTGAAGACTTTGATAACAGACTTGTAGAATTCTGTGTA 160646
Query 475430 GAAGATTTCAAGAGGAAAAATAAAGTT---GATCTTTCAACATCTGCTAAAGCATTAAGA 475486
||||||| ||||| || |||| || | || | | ||| ||||| ||| ||||||
Sbjct 160647 CAAGATTTTAAGAGAAAGAATAGAGGTATGGACTTAACTACAAATGCTAGAGCTTTAAGA 160706
Query 475487 CGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTACT 475546
| | |||||| || || ||||| ||| || || | || ||| | || || |||||
Sbjct 160707 AGATTAAGAACTCAATGCGAGCGTGCAAAGAGAACTTTATCATCTTCCACCCAGGCTACT 160766
Query 475547 GTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGGGCTAAA 475606
||||| | ||||| |||| ||||| ||||||||| | |||| || |||| |
Sbjct 160767 ATTGAATTAGATTCGCTTTACGAAGGTATTGATTATTCAGTTGCCATTAGTAGAGCTAGA 160826
Query 475607 TTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTCTC 475666
||||| || | ||| ||||| || | ||| | | || ||||| ||||||||
Sbjct 160827 TTTGAGGAACTCTGTGCTGATTATTTCCGTGCAACTTTAGCTCCAGTTGAGAAAGTTCTC 160886
Query 475667 AGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACA 475726
| ||| || | ||||| | || ||||| |||| | || || || || ||
Sbjct 160887 AAGGATGCTGGTATGGACAAGAGATCTGTACATGATGTTGTCTTAGTTGGTGGCTCTACC 160946
Query 475727 AGAATTCCAAAAATAAGAGAAATGCTTTCATCATATTTTAATGGTAAAAAGTTAAATG-A 475785
| ||||||||| | | || || || || || ||||| || | || |
Sbjct 160947 CGTATTCCAAAAGTTCAGGCTTTGATTCAGGAATTCTTCAACGGTAAGGAGCCA--TGCA 161004
Query 475786 AAGTG-TAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTAT 475844
||| | ||||| |||||||||||||| ||||| |||||||| ||||| || || |||
Sbjct 161005 AAGCAATTAATCCAGATGAAGCTGTTGCTTATGGTGCTGCTGTTCAAGCTGCAATCTTAA 161064
Query 475845 CAGGT---CAATCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTT 475901
||| ||||| | | || | |||| ||| || || ||||| | |
Sbjct 161065 ATGGTGAACAATCCTCTGCCGTTCAGGATC-TCTTGTTGTTG--GATGTTGCTCCATTAT 161121
Query 475902 CATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTA 475961
|| | ||| | ||||| | ||| || ||||||| || |||||||| | ||||| |||
Sbjct 161122 CACTCGGTTTAGAAACTGCTGGTGGTGTTATGACCAAGCTTATTGAGCGTAATACAACTA 161181
Query 475962 TCCCATGCAAAAAAT-CAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACC 476020
||||| ||||| || || |||| || | |||||| ||||||| |||| |||
Sbjct 161182 TCCCA-GCAAAGAAGACACAAGTCTTCACTACTTATGCTGATAACCAAAGTGGTGTCTTA 161240
Query 476021 ATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTT 476080
|||||| ||| ||| ||||| ||| | ||||| || || || || |||| ||
Sbjct 161241 ATCCAAGTCTATGAGGGTGAGAGAGCTATGACTAAGGACAACCACCTCCTCGGAAAATTC 161300
Query 476081 AATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGAT 476140
||||||| ||||| || || || || || || || || || ||||| || || ||||||
Sbjct 161301 CATCTTGATGGTATCCCACCAGCACCGAGGGGTGTGCCACAGATTGAGGTCACCTTTGAT 161360
Query 476141 ATTGATGCAAATGGTATTCTTAATGTTACTGCTTGTGATAAATCTAGTAAC---AAGAGT 476197
|||||||| |||||||| | ||||| ||||| |||||| || | | |||||
Sbjct 161361 ATTGATGCCAATGGTATCTTGAATGTCTCTGCTGTTGATAA---GAGCACCGGAAAGAGC 161417
Query 476198 AAAAATATAACTATTACAAACAATCGTGGTAGATTTACTGAAGAACAAATTCAACGTATG 476257
| || || || ||||| ||| || |||||||| | | || | ||| |||| |||
Sbjct 161418 AGCAAGATTACCATTACTAACGATAAGGGTAGATTATCAAAGGATGATATTGAACGCATG 161477
Query 476258 GTTGATGAAGC 476268
||| |||| ||
Sbjct 161478 GTTAATGATGC 161488
Score = 235 bits (260), Expect = 4e-56
Identities = 418/604 (69%), Gaps = 18/604 (3%)
Strand=Plus/Plus
Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388
|| ||||||||||||||||| || || ||| ||||| | ||| ||| ||||| ||
Sbjct 159933 GCTATTGGTATTGATTTAGGTACCACATACTCATGTGTTGGTGTATGGAGAAATGATACG 159992
Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448
||||| || | | ||||| |||||||| | ||||||||||||||||| | |||||
Sbjct 159993 GTAGATATTGTCCCAAATGATCAAGGTAACCGTACAACACCATCATATGTAGCATTTACA 160052
Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAAT 474508
|||||||| | ||| ||||| ||||| || || |||||| ||| ||||| | |||
Sbjct 160053 GAAACTGAGCGTCTCATTGGTGATGCAGCAAAGAATCAAGTTGCTAGAAATCCAGAGAAT 160112
Query 474509 ACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCA--CTGTCCAAT 474566
|| |||||||||||||| | | |||||| | || ||||||| |||| | || |||
Sbjct 160113 ACAGTTTTTGATGCTAAACGTCTTATTGGTAGGAAATTTGATG--ACCAGGCAGTACAAA 160170
Query 474567 CTGATATGCGTCATTGGCCTTTTAAGGT-GATAAATGT----TGG--TGGTAAACCATAT 474619
||||||| ||| ||||| ||||| || | || | || || | || |||
Sbjct 160171 GTGATATGACTCACTGGCCATTTAAAGTAGTTAGAGGTCCAAAGGACAAGCCAATCATTA 160230
Query 474620 ATAGAAGCAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATG 474679
| |||| || ||||| | || |||| | || | |||||| | |||
Sbjct 160231 GTGTAAGCTAT----TTGGGTGAGAAGAAGGAATTCCATGCCGAGGAGATTTCTGCTATG 160286
Query 474680 GTTTTAGCCAAAATGAAACAAACCGCGAGCTCATATCTTGGACAAGAAGTAACTGATGCA 474739
|||||| || ||||| ||| | | |||| | || | | | | ||||
Sbjct 160287 GTTTTACAAAAGATGAAGGAAATCTCTGAAGCATACTTGGGTCGCCCAATTAAGAATGCT 160346
Query 474740 GTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGA 474799
||| ||||||| ||||| || || ||||| || |||||||||||||| || ||||| ||
Sbjct 160347 GTAGTTACTGTACCAGCTTACTTCAATGACTCACAACGTCAAGCAACAAAGGATGCTGGT 160406
Query 474800 AGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCT 474859
|||||| ||| | ||||| | | || |||||||| ||||| ||||| || |||||
Sbjct 160407 GCAATTGCTGGTTTGAATGTAATGAGAATCATTAATGAGCCAACTGCAGCTGCTATTGCT 160466
Query 474860 TATGGTCTTGATAAGAATTCTGACAAAGAAGTAAATGTTTTAATCTTTGATT---GTGGA 474916
|| ||||||||||| || | || ||||||||| ||||| |||| ||||
Sbjct 160467 TACGGTCTTGATAAAAAAGGAACCGGTGAGAGAAATGTTTTGATCTTCGATTTAGGTGGT 160526
Query 474917 GGTA 474920
||||
Sbjct 160527 GGTA 160530
>seq401
Length=300945
Score = 239 bits (264), Expect = 3e-57
Identities = 533/787 (68%), Gaps = 51/787 (6%)
Strand=Plus/Minus
Query 296928 ACATTCTTATCCTTTTTGTTATAGAACAGATACTCCACTTATTTTTAAAATTTGTTC-TG 296986
|||||||||||||||||||| ||| | ||||| || ||| | | | ||||| |
Sbjct 111852 ACATTCTTATCCTTTTTGTTGGAGATCTGATACACCT-TTACAATATAGAGCTGTTCCTT 111794
Query 296987 GTTGGTTTTTAAACGCATCaaatgaaaaattcagagaaaaaatgatgattaataattcta 297046
|||||| | || | |||| || | ||||| | | | ||||||||| |
Sbjct 111793 CCTGGTTTATTAATGT------TGAATCTTTAAAAGAAAGATTATTAATTAATAATGAAA 111740
Query 297047 aaataaattGGATGCCATCAAATATTGGTACAAATCAT---TTTGATAATTGGTTACAAT 297103
||| | |||||| || ||| || || | | | ||| ||||||||||||||
Sbjct 111739 AAACTAGTTGGATTCCT---AATTATGTTAAAGAGAAAAGATTTCATAATTGGTTACAAG 111683
Query 297104 CTTCAGTGGATTGGTGTATTTCAAGAAGTA---GATATTGGGGAACACCAATTCCAATTT 297160
| | ||||||||| | ||| ||| ||| ||||||||||||||| || || |
Sbjct 111682 ATGCTAGAGATTGGTGTGT---AAGTCGTAATCGATTTTGGGGAACACCAATACCTATAT 111626
Query 297161 GGAAATCTGATGATGGTGAAGAAATAATTTGTATTGGTTCACTTGAAGAATTAAAAGAAT 297220
|| ||| || ||| | | || | ||||||||| | |||||||| ||| |
Sbjct 111625 GGGTATCAGAAGATTATACTGTTATTAAATGTATTGGTAGTATAGAAGAATTGAAATCTT 111566
Query 297221 T---------TTCAGGAATTGATAATATTAATGATTTACATATTGATAAAATTGATCAAA 297271
| || | || ||| | |||| |||| ||||| | || |||||| | |
Sbjct 111565 TGGCATCTAATTTAAAAAATGAAGAAATTACTGATATACATCGTCATTTTATTGATTATA 111506
Query 297272 TAAAAATTCCTTCTCGTAAAGGA-AAAGGCATG-----TTATCTCGTGTTACCGGTGTTT 297325
| |||||||| || | |||| ||| || ||| | || | ||||
Sbjct 111505 TTGAAATTCCTGATCCAAGAGGAGAAAATTATCCTCCATTAAAAAGAATTGAAGAAGTTT 111446
Query 297326 TAGATTGTTGGTTTGAATCAGGTTCTATGCCTTATGGTCAAATTCATTATCCTTTTGAAA 297385
| ||||||||||||||||| ||||| |||||||||| ||| ||||||| |||||||
Sbjct 111445 TTGATTGTTGGTTTGAATCTGGTTCAATGCCTTATGCATCTATTAATTATCCATTTGAAA 111386
Query 297386 ATTCCGAAATTTTAGACACTTCACAAGATTATATTGCAGATTTTATAACAGAATCAATTG 297445
|| ||| | || ||| | | ||| | ||| |||||| | ||| | | |
Sbjct 111385 ATAAAGAATTATTTAACAAT-----ATATT-TCCTGCTGATTTTGTTGGTGAAGGATTAG 111332
Query 297446 ATCAAACAAGAGGTTGGTTTTATACTTTATTAGTTCTTTCTACAGCTATATTTAACAAAC 297505
||||||||||||| ||||||||||||||| | || | |||||||| ||||| | |||
Sbjct 111331 ATCAAACAAGAGGATGGTTTTATACTTTAATGGTATTATCTACAGCATTATTTGATCAAC 111272
Query 297506 CAGCATTTAAAAATGTAATTGTTACAGGAATTGTTAACGCAGCTGATGGACAAAAAATGT 297565
|||| ||||||||| | ||||||| || | ||| ||| ||||||| |||||||||
Sbjct 111271 CAGCTTTTAAAAATATTATTGTTAATGGTTTAGTTTTAGCATCTGATGGTAAAAAAATGT 111212
Query 297566 CAAAAAG--TAAAGGTAATTATCCTGATCCA-AATATTTTGATGGATAAATATGGTGCAG 297622
||||||| |||| ||||||||||||||| | || ||| | |||||||||||||||
Sbjct 111211 CAAAAAGATTAAAA--AATTATCCTGATCCATTAGATATTG-TTAATAAATATGGTGCAG 111155
Query 297623 ATACTTTACGTCTTTATTTATTATCAA--CACCTGTAGTTAAAGCCGAATCAATTAAATT 297680
|| ||||| | |||||| | || || |||| ||||| | ||| ||| | | | |||
Sbjct 111154 ATTCTTTAAG--ATTATTTTTAATTAATTCACCAGTAGTAAGAGCTGAAACTTTAAGATT 111097
Query 297681 TGATGAA 297687
| | |||
Sbjct 111096 TAAAGAA 111090
Score = 136 bits (150), Expect = 3e-26
Identities = 330/494 (67%), Gaps = 18/494 (4%)
Strand=Plus/Minus
Query 295795 GATGGACCTCCATTTGCTACAGGA--ACTATGCATTATGGACATATTTTAGTCTCAACTA 295852
|||||||| |||||||| |||||| || | |||||||| ||||| | | ||
Sbjct 112916 GATGGACCCCCATTTGCAACAGGATTACCA--CATTATGGTCATATACTTGCAGGTACAG 112859
Query 295853 TTAAAGATACCATGACTAGATATTTAACAATGAATGGTTATCAAGTTAATATGGGAATTG 295912
| |||||| | || |||||| ||| || || ||| | | | | || |||
Sbjct 112858 TCAAAGATGTAGTTACGAGATATGCAACTCAAAAAGGATATTATTGTGAAAGAAGATTTG 112799
Query 295913 GTTGGGATTGCCATGGAGTTCCAATTGAA-ATG---TTGGCTaaaaaaaCTATCGGATAT 295968
| |||||||| |||||| | ||| | ||| ||| ||| | |||| || | ||
Sbjct 112798 GATGGGATTGTCATGGATTACCAGTAGAACATGAAATTG-----ATAAACAATT--AAAT 112746
Query 295969 ATCACAAAGA---AAGATTTATTGGAATACGGTATTGATCGTCATAATGATATTTGTCGT 296025
|| |||| | ||||| | ||| | | || |||||| ||||||| ||| |
Sbjct 112745 ATTACAAGTAGGGAAGATGTTTTGAATAAAGGAATTGATTTCTATAATGAATCATGTAGA 112686
Query 296026 GATATGGTATTAAAATGTACTGATAAATGGTATTCTGATTTTGAGAGAATTGGAAGATGG 296085
|| ||||||| || |||| | ||||| | | | || ||| |||||||||
Sbjct 112685 TCAATAGTATTAAGATATACTCAAGAATGGAAATTAACAGTAGAAAGAGTTGGAAGATTA 112626
Query 296086 ATTGATATTAATAATGAATATAAAACAATGGATAAAAATTTTATGGAATCTGTTATTTGG 296145
|||||| || |||||| ||||| ||| |||||| ||| |||||| || |||| |||
Sbjct 112625 ATTGATTTTGATAATGGATATAGAACTATGGATTTAAAGTTTATGCAAACTGTATGGTGG 112566
Query 296146 TCATTTAAACAACTTTATGAAAAGGAAATGATTTTTGAAGGTTATAAAGTTATGCCTTAT 296205
|||||||||||| | ||| ||| | | ||| | || ||||| ||| ||||| |||
Sbjct 112565 GTATTTAAACAACTCTTTGATAAGAATCTAGTTTATAGAGCTTATAGAGTGATGCCATAT 112506
Query 296206 TCTACTGGTTGCAATACACCATTATCTCATTTTGAGGCAAAACAAAATTATAAAGAGATT 296265
|| || | || |||||| |||| ||||||| || ||||||||| || |
Sbjct 112505 TCAACAGCATGTGCAACACCACTATCGAATTTTGAATGTAATTTAAATTATAAGGATGTA 112446
Query 296266 ATTGATCCATCTGT 296279
| ||||||||| ||
Sbjct 112445 AATGATCCATCAGT 112432
Score = 122 bits (134), Expect = 6e-22
Identities = 210/303 (69%), Gaps = 4/303 (1%)
Strand=Plus/Plus
Query 475884 TTGACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTA 475943
|||| || ||||| | || |||||| | ||||| | || || || | ||| || |
Sbjct 206201 TTGATGTTACTCCTTTATCTTTAGGTATCGAAACTTTGGGTGGAGTTTTTACTCGACTAA 206260
Query 475944 TTGACAGAAATACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATA 476003
|| | ||||| || | ||||| || || ||||||| |||||| | ||||
Sbjct 206261 TTAATAGAAACACCACGATCCCCACTAAGAAGAGCCAAGTATTCTCCACTGCAGCGGATA 206320
Query 476004 ATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATA 476063
| ||||| || || | | || | || |||||| |||| || |||||||
Sbjct 206321 ACCAAACTCAGGTTGGAATTAAGGTTTTCCAGGGAGAAAGAGAATTTGCTGCTGATAATA 206380
Query 476064 ACAAACTTGGAACTTTT--AATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCA 476121
| ||||||| ||| ||| || || |||||||| || || || |||||||||||
Sbjct 206381 AGTTACTTGGACAATTTGAAATGATG--GGAATTCCTCCAGCCCCTAGGGGAGTTCCTCA 206438
Query 476122 AATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAATGTTACTGCTTGTGATAA 476181
||||||||| ||||||||||||||||| ||||| ||| | |||||| |||| ||||||
Sbjct 206439 AATTGAAGTAACTTTTGATATTGATGCGAATGGAATTATGAATGTTGGTGCTATTGATAA 206498
Query 476182 ATC 476184
||
Sbjct 206499 GTC 206501
Score = 120 bits (132), Expect = 2e-21
Identities = 96/116 (83%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 474737 GCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCG 474796
|| ||||||||||| ||||| |||||||||||||||||||||||||||||||| || |||
Sbjct 205453 GCTGTAATTACTGTGCCAGCCTATTTTAATGATTCTCAACGTCAAGCAACTAAGGACGCG 205512
Query 474797 GGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGC 474852
|| || |||||| | ||||| | | || ||||| |||||||||||||| ||
Sbjct 205513 GGCTCTATAGCAGGTTTAAATGTGACAAGAATCATTAACGAACCAACAGCAGCAGC 205568
>seq579
Length=144132
Score = 228 bits (252), Expect = 5e-54
Identities = 390/559 (70%), Gaps = 10/559 (2%)
Strand=Plus/Minus
Query 474332 ATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTA 474391
|||||||| |||||||| |||||||| ||||| | | | | ||||||||| ||||
Sbjct 66626 ATTGGTATCGATTTAGGTACTACTTATTCATGTGTTGGTATCTACAAAAATGGTAGAGTA 66567
Query 474392 GAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAA 474451
||||| ||| | ||||| || || || | | |||||||| ||||| || ||||||||
Sbjct 66566 GAAATCATTCCAAATGAACAGGGCAACCGTATTACACCATCTTATGTATCATTTACTGAT 66507
Query 474452 ACTGA-ACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATAC 474510
||| | || | || || || | ||||| | |||||| || ||||| ||| | ||
Sbjct 66506 GATGAGAGAT-TGATCGGTGAGTCAGCTAAGAACCAAGCTACAATCAATCCAGTTCAGAC 66448
Query 474511 TATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGA 474570
| || |||| |||||| | || || ||| |||| | ||| | | |||||| ||
Sbjct 66447 ATTGTTCGATGTGAAAAGACTTATCGGCCGTCGTTTTAAGGATGACTCCGTCCAAAAGGA 66388
Query 474571 TATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGCAAT 474630
|| | | | || | | || | | || | | || || || ||| | | |
Sbjct 66387 TAAGACTTTGTTACCATATGAGATTGTCAACAAGGACAGCAAGCCTTACATACAGGT--T 66330
Query 474631 ACACGCA--GGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCC 474688
|| || ||||| | |||||||| | || ||| | ||||| | ||||||||||
Sbjct 66329 ACTGTCAAGGGTGAGAAGAAACAATTGGCTCCAGAAGAGGTTTCTGCTATGGTTTTAGTT 66270
Query 474689 AAAATGAAACAAACCGCG--AGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTA 474746
|||||||| | | || |||| ||||| ||| | ||||| | | || |||||||
Sbjct 66269 AAAATGAAGGAGATTGCTGAAGCT--TATCTCGGAAAGGAAGTCAAGCACGCTGTAATTA 66212
Query 474747 CTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTG 474806
|||||||||| || ||||||||| |||| |||||||| ||||| ||||| || ||||
Sbjct 66211 CTGTTCCAGCTTACTTTAATGATGCTCAGCGTCAAGCCACTAAGGATGCTGGTGCTATTG 66152
Query 474807 CAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTC 474866
| ||| | ||||| | ||||| |||||||| |||||||| || || |||||| ||||
Sbjct 66151 CTGGTTTGAATGTAATCCGTATCATTAATGAGCCAACAGCGGCAGCTATTGCTTTTGGTT 66092
Query 474867 TTGATAAGAATTCTGACAA 474885
| |||||||| |||| ||
Sbjct 66091 TGGATAAGAAGGCTGAGAA 66073
Score = 136 bits (150), Expect = 3e-26
Identities = 251/366 (69%), Gaps = 9/366 (2%)
Strand=Plus/Minus
Query 475793 AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAA 475852
|| ||||| ||||| ||||| ||||| |||||||| ||||| | ||| ||| ||||| |
Sbjct 65561 AACCCTGACGAAGCCGTTGCTTATGGTGCTGCTGTACAAGCTGGTATCTTAGCAGGTGAG 65502
Query 475853 TCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTT 475912
| || ||| || |||||| | || || || || | | || ||| ||
Sbjct 65501 GGTGGT-AGCGACT---TATTATTGT-----TGGATGTTACACCTTTAACTTTGGGTATT 65451
Query 475913 GAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAA 475972
|| || ||||| || ||||||| || || |||| ||||| ||| | | ||| ||
Sbjct 65450 GAGACTGTTGGTGGAGTTATGACCAAGCTCATTGGTAGAAACACTGTTGTTCCAACAAAG 65391
Query 475973 AAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTT 476032
|| |||| ||| ||||| |||||||| || | ||| |||||| | | |
Sbjct 65390 AAGAGCCAAGTTTTTAGTACTTACCAGGATAATCAGCCAGCCGTACTTATCCAAGTTTAT 65331
Query 476033 GAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGT 476092
|||||||| | | | || || || || ||| || |||| || | ||| ||
Sbjct 65330 GAAGGTGAGCGTCCAATGACCAAGGACAACAACCTCCTCGGAAAGTTCGAGCTTTCTGGA 65271
Query 476093 ATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAAT 476152
|| || |||||||| ||||| |||||||||||||| ||||||||||| |||||| | ||
Sbjct 65270 ATCCCCCCTGCTCCAAGAGGTGTTCCTCAAATTGAGGTTACTTTTGAAATTGATACTGAT 65211
Query 476153 GGTATT 476158
||||||
Sbjct 65210 GGTATT 65205
>seq224
Length=184738
Score = 129 bits (142), Expect = 4e-24
Identities = 127/164 (77%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 817100 GATTTTTCATCTCCAAATATTGCAAAGGAAATGCATATTGGACACTTGAGATCTACAATA 817159
||||| ||||| ||||| |||||||| ||||||||| | ||||| ||||||||||||||
Sbjct 73618 GATTTCTCATCACCAAACATTGCAAAAGAAATGCATGTGGGACATTTGAGATCTACAATC 73677
Query 817160 ATTGGTGAATCTCTTTGTAGAATATATGAATTTTGTGGATGTGAAGTACAAAGAATAAAT 817219
|||||||| | |||||||| ||| | | |||| ||| ||| |||| | |||
Sbjct 73678 ATTGGTGACACGACATGTAGAATTCTTGAGTACTTAGGATTTGAGGTATTAAGAGTTAAT 73737
Query 817220 CATATTGGTGATTGGGGAACACAATTTGGTATGTTAATTGCATA 817263
||| |||| |||||||| || ||||| |||||| | || | |||
Sbjct 73738 CATGTTGGAGATTGGGGTACTCAATTCGGTATGCTTATCGAATA 73781
>seq849
Length=33325
Score = 125 bits (138), Expect = 5e-23
Identities = 136/178 (76%), Gaps = 2/178 (1%)
Strand=Plus/Plus
Query 480593 ATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTG 480652
||| ||||||| ||||||||| ||| || ||||||||||| || || || | ||||||
Sbjct 19444 ATTGTAATCAGATAGAGTTCTTCCATCCTCTAGTTGCTTTCCTGCGAAGATCAAACGTTG 19503
Query 480653 TTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATC 480712
||| || || ||||||||||||||||||||||||||| ||| ||| ||||| |||||
Sbjct 19504 TTGGTCGGGTGGAATTCCTTCCTTGTCTTGAATCTTTGCTTTAACATTCTCAATTGTATC 19563
Query 480713 AG-TGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
| | | | || ||| || ||||| || || || | ||| ||||| ||||| ||
Sbjct 19564 TGAAGGCTCTACTTCCAA-TGTGATAGTCTTTCCTGTCAAAGTTTTAACAAAAATCTG 19620
Score = 116 bits (128), Expect = 2e-20
Identities = 134/178 (75%), Gaps = 2/178 (1%)
Strand=Plus/Plus
Query 480593 ATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTG 480652
||| ||||||| |||||||| || || | ||| || || ||||| || | ||||||
Sbjct 19672 ATTGTAATCAGAGAGAGTTCTTCCGTCCTCTAATTGTTTCCCCGCAAAGATCAAACGTTG 19731
Query 480653 TTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATC 480712
||||||||| |||||||||||||| |||||||||||| ||| ||| ||||| |||||
Sbjct 19732 TTGATCAGGTGGAATTCCTTCCTTATCTTGAATCTTTGCTTTAACATTCTCAATTGTATC 19791
Query 480713 AG-TGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
| | | | || ||| || ||||| || || || | ||||||||| ||||| ||
Sbjct 19792 TGAAGGCTCTACTTCCAA-TGTGATAGTCTTTCCTGTCAAAGTCTTAACAAAAATCTG 19848
Score = 107 bits (118), Expect = 1e-17
Identities = 132/178 (74%), Gaps = 2/178 (1%)
Strand=Plus/Plus
Query 480593 ATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTG 480652
||| ||||||| |||||||| || || | ||| ||||| ||||| || | ||||||
Sbjct 19216 ATTGTAATCAGAGAGAGTTCTTCCGTCCTCTAATTGTTTTCCTGCAAAGATCAAACGTTG 19275
Query 480653 TTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATC 480712
||| || || ||||||||||||||||||||||||||| ||| ||| || || |||||
Sbjct 19276 TTGGTCGGGTGGAATTCCTTCCTTGTCTTGAATCTTTGCTTTAACATTCTCGATTGTATC 19335
Query 480713 AG-TGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
| | | | || ||| || ||||| || || || | ||| ||||| ||||| ||
Sbjct 19336 TGAAGGCTCTACTTCCAA-TGTTATAGTCTTTCCCGTCAAAGTTTTAACAAAAATCTG 19392
>seq335
Length=109725
Score = 114 bits (126), Expect = 8e-20
Identities = 202/287 (70%), Gaps = 18/287 (6%)
Strand=Plus/Minus
Query 355249 CCAGTGCCAATACCTTCTGTTCCATTAACTAAAATCATTGGAATTACAGGTACATAAAAT 355308
|| || |||||||| || || ||||| || |||||||||||||||| || || ||| ||
Sbjct 4519 CCTGTTCCAATACCGTCAGTACCATTCACCAAAATCATTGGAATTATTGGAACGTAATAT 4460
Query 355309 ACTGGTTCAATCATTTTATTATCTTCAAATTGAT--GTTGCAATACATCAAAATCATGTT 355366
| || ||||| || ||| ||| || | ||| |||| | | |||| ||
Sbjct 4459 AAAGGCTCAATTTGTTGTCCATCATCATATAAGTAAGTT--AATAAAGGATCATCAGCTT 4402
Query 355367 GTATGAAAATATATTTAGTTAATTGATTGA--GTTGTGTGAAGATATATCGTGCA---CT 355421
| ||| |||||| |||| ||| |||| | | || || ||||| || ||| ||
Sbjct 4401 CTGGGAATATATATCTAGTCCATT--TTGATAGCTTAGTAAATATATAACGAGCAGCGCT 4344
Query 355422 TGCATTATCTTTGCCTCCA--CTTAATCTTGTACCAAATTGACCATTGGGAAGTAATAAA 355479
||||| |||| || || ||| ||| |||||||||||||| || |||||||
Sbjct 4343 TGCAT---CTTTTCCGCCCTCCTT--TCTACTACCAAATTGACCACAAGGTTCTAATAAA 4289
Query 355480 TTTATGTTGTTACTTCCAACATAATTTTGTGCCATTTTTATTATAGT 355526
|| | ||||||||||||||| ||||||| ||||| |||| |||||
Sbjct 4288 TTAAGATTGTTACTTCCAACAAAATTTTGAGCCATGTTTACAATAGT 4242
>seq445
Length=134117
Score = 104 bits (114), Expect = 2e-16
Identities = 133/181 (73%), Gaps = 2/181 (1%)
Strand=Plus/Minus
Query 480590 AACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACG 480649
|| ||| || |||| || ||||||| |||||| | ||||||||| ||||| || |||||
Sbjct 79402 AATATTGTAGTCAGATAAAGTTCTGCCATCTTCCAATTGCTTTCCTGCAAAGATCAGACG 79343
Query 480650 TTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGT 480709
||||||||||| ||||| || || ||||| || |||||| || ||| ||||| ||
Sbjct 79342 CTGTTGATCAGGTGGAATGCCCTCTTTGTCCTGGATCTTTGCCTTAACATTCTCAATGGT 79283
Query 480710 ATCAG-TGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTT 480768
|| | | | || || ||| || || || || || || | ||| || || |||||||
Sbjct 79282 GTCGGAAGGCTCAACTTCCAA-TGTGATGGTCTTTCCTGTTAAAGTTTTTACAAAAATTT 79224
Query 480769 G 480769
|
Sbjct 79223 G 79223
>seq290
Length=478353
Score = 100 bits (110), Expect = 2e-15
Identities = 267/403 (66%), Gaps = 24/403 (6%)
Strand=Plus/Plus
Query 894947 TAATTTATATTGCTGATTTATTTGCAAAAATGAATaaaaaaaTGGATTCTGATCTTGATA 895006
|| |||| | || |||| ||||| | |||| || || |||| | ||||||||| |
Sbjct 16923 TATTTTACGTAGCAGATTGGTTTGCTCTACTGAACAATAAGATGGGTGGTGATCTTGAAA 16982
Query 895007 AAATAAAAGAT-GTAGGTTTATATTTCATTGAAGTTTTTAAAGCATGTGGTATTAATATG 895065
| || || ||| || ||| |||||| || | | | ||||| || || |||||
Sbjct 16983 AGATCAA-GATCGTTGGTGAATATTTTGTTCACATATGGAAAGCTGCAGGAATGGATATG 17041
Query 895066 TCTGAAACAAAGTTTATTTGGTCAAGTGATTTATTTAA---TAAAAATCCTGAAAAATAT 895122
|| | || ||| ||||| || ||||| |||| | || || | | |||||
Sbjct 17042 ACTAATGTAAGATTTGTTTGGGCATCGGATTTCATTAACGGTGAAGATTCCAATGAATAT 17101
Query 895123 TTTACAAGATTGTTAGATATTTCCGAAGAAACCTC--TCTTTCCAGGAGTAAAAGATGTT 895180
| |||| | || |||||||| ||||| | | || | || | |||||||||||
Sbjct 17102 TGGTTAAGAGTATTTGATATTTCT--AGAAAGTTTAATATTACTAGAATTAAAAGATGTT 17159
Query 895181 GTCAAATTATGGGTCGAAAAGACGGAGATGA---ATTATCTGTTTCTCAAATTATTTATC 895237
| ||||||||||| || |||| | ||||| | || || ||| | | ||||||
Sbjct 17160 GCCAAATTATGGGGAGACAAGAAAGTGATGAGCAACCATGTGCTTC---AGTCTTTTATC 17216
Query 895238 CTTGCATGCAAGTTGCAGATATTTTTGAACTCGAACCTGAAGGAATAGATATTTGTCAAT 895297
| || ||||| |||||||| || |||| || | ||||||||||||||
Sbjct 17217 CATGTATGCAGTGCGCAGATATATTCCAACTGAAAGC---------AGATATTTGTCAAT 17267
Query 895298 TAGGTGTTGATCAACGTAAAGTTAATATGCTCGCTCTCGAATA 895340
||||| | || || | ||||| |||||||| ||| |||||
Sbjct 17268 TAGGTATGGACCAGAGAAAAGTAAATATGCTTGCTAGAGAATA 17310
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268142610691244
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |